Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2633 and Echvi_2634 are separated by 76 nucleotides Echvi_2634 and Echvi_2635 overlap by 26 nucleotides
Echvi_2633: Echvi_2633 - gamma-glutamylphosphate reductase (EC 1.2.1.41) (from data) , at 3,120,871 to 3,122,070
_2633
Echvi_2634: Echvi_2634 - glutamate 5-kinase, at 3,122,147 to 3,122,953
_2634
Echvi_2635: Echvi_2635 - pyrroline-5-carboxylate reductase, at 3,122,928 to 3,123,743
_2635
Position (kb)
3122
3123 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3121.168 kb on - strand, within Echvi_2633 at 3121.235 kb on - strand, within Echvi_2633 at 3121.271 kb on - strand, within Echvi_2633 at 3121.276 kb on - strand, within Echvi_2633 at 3121.277 kb on + strand, within Echvi_2633 at 3121.278 kb on - strand, within Echvi_2633 at 3121.363 kb on - strand, within Echvi_2633 at 3121.440 kb on - strand, within Echvi_2633 at 3121.533 kb on + strand, within Echvi_2633 at 3121.617 kb on + strand, within Echvi_2633 at 3121.618 kb on - strand, within Echvi_2633 at 3121.676 kb on - strand, within Echvi_2633 at 3121.707 kb on + strand, within Echvi_2633 at 3121.708 kb on - strand, within Echvi_2633 at 3121.766 kb on + strand, within Echvi_2633 at 3121.767 kb on - strand, within Echvi_2633 at 3121.777 kb on - strand, within Echvi_2633 at 3121.852 kb on + strand, within Echvi_2633 at 3121.903 kb on + strand, within Echvi_2633 at 3121.903 kb on + strand, within Echvi_2633 at 3121.903 kb on + strand, within Echvi_2633 at 3121.904 kb on - strand, within Echvi_2633 at 3121.935 kb on - strand, within Echvi_2633 at 3122.063 kb on - strand at 3122.063 kb on - strand at 3122.116 kb on + strand at 3122.116 kb on + strand at 3122.117 kb on - strand at 3122.148 kb on + strand at 3122.227 kb on + strand at 3122.228 kb on - strand, within Echvi_2634 at 3122.265 kb on - strand, within Echvi_2634 at 3122.275 kb on + strand, within Echvi_2634 at 3122.276 kb on - strand, within Echvi_2634 at 3122.293 kb on + strand, within Echvi_2634 at 3122.293 kb on + strand, within Echvi_2634 at 3122.398 kb on + strand, within Echvi_2634 at 3122.399 kb on - strand, within Echvi_2634 at 3122.400 kb on + strand, within Echvi_2634 at 3122.400 kb on + strand, within Echvi_2634 at 3122.643 kb on + strand, within Echvi_2634 at 3122.643 kb on + strand, within Echvi_2634 at 3122.643 kb on + strand, within Echvi_2634 at 3122.656 kb on + strand, within Echvi_2634 at 3122.656 kb on + strand, within Echvi_2634 at 3122.657 kb on - strand, within Echvi_2634 at 3122.661 kb on + strand, within Echvi_2634 at 3122.664 kb on + strand, within Echvi_2634 at 3122.722 kb on + strand, within Echvi_2634 at 3122.860 kb on + strand, within Echvi_2634 at 3122.900 kb on + strand at 3122.900 kb on + strand at 3122.926 kb on + strand at 3122.929 kb on + strand at 3122.969 kb on + strand at 3122.981 kb on - strand at 3123.209 kb on - strand, within Echvi_2635 at 3123.209 kb on - strand, within Echvi_2635 at 3123.215 kb on + strand, within Echvi_2635 at 3123.215 kb on + strand, within Echvi_2635 at 3123.215 kb on + strand, within Echvi_2635 at 3123.216 kb on - strand, within Echvi_2635 at 3123.216 kb on - strand, within Echvi_2635 at 3123.216 kb on - strand, within Echvi_2635 at 3123.217 kb on + strand, within Echvi_2635 at 3123.217 kb on + strand, within Echvi_2635 at 3123.217 kb on + strand, within Echvi_2635 at 3123.218 kb on - strand, within Echvi_2635 at 3123.218 kb on - strand, within Echvi_2635 at 3123.257 kb on + strand, within Echvi_2635 at 3123.257 kb on + strand, within Echvi_2635 at 3123.293 kb on + strand, within Echvi_2635 at 3123.297 kb on - strand, within Echvi_2635 at 3123.353 kb on + strand, within Echvi_2635 at 3123.354 kb on - strand, within Echvi_2635 at 3123.376 kb on - strand, within Echvi_2635 at 3123.422 kb on + strand, within Echvi_2635 at 3123.422 kb on + strand, within Echvi_2635 at 3123.423 kb on - strand, within Echvi_2635 at 3123.423 kb on - strand, within Echvi_2635 at 3123.423 kb on - strand, within Echvi_2635 at 3123.437 kb on + strand, within Echvi_2635 at 3123.437 kb on + strand, within Echvi_2635 at 3123.438 kb on - strand, within Echvi_2635 at 3123.444 kb on + strand, within Echvi_2635 at 3123.444 kb on + strand, within Echvi_2635 at 3123.445 kb on - strand, within Echvi_2635 at 3123.529 kb on + strand, within Echvi_2635 at 3123.654 kb on - strand, within Echvi_2635 at 3123.654 kb on - strand, within Echvi_2635 at 3123.730 kb on - strand at 3123.780 kb on + strand at 3123.797 kb on + strand at 3123.867 kb on + strand at 3123.874 kb on + strand at 3123.899 kb on - strand at 3123.939 kb on - strand at 3123.940 kb on + strand at 3123.940 kb on + strand at 3123.940 kb on + strand at 3123.944 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 3,121,168 - Echvi_2633 0.25 -2.7 3,121,235 - Echvi_2633 0.30 -3.0 3,121,271 - Echvi_2633 0.33 -0.8 3,121,276 - Echvi_2633 0.34 -0.4 3,121,277 + Echvi_2633 0.34 -4.5 3,121,278 - Echvi_2633 0.34 -1.9 3,121,363 - Echvi_2633 0.41 -3.0 3,121,440 - Echvi_2633 0.47 -4.0 3,121,533 + Echvi_2633 0.55 -1.8 3,121,617 + Echvi_2633 0.62 -2.4 3,121,618 - Echvi_2633 0.62 -1.6 3,121,676 - Echvi_2633 0.67 -3.0 3,121,707 + Echvi_2633 0.70 -2.4 3,121,708 - Echvi_2633 0.70 -1.8 3,121,766 + Echvi_2633 0.75 -2.8 3,121,767 - Echvi_2633 0.75 -0.0 3,121,777 - Echvi_2633 0.76 -2.6 3,121,852 + Echvi_2633 0.82 -2.6 3,121,903 + Echvi_2633 0.86 -1.2 3,121,903 + Echvi_2633 0.86 -2.4 3,121,903 + Echvi_2633 0.86 -2.4 3,121,904 - Echvi_2633 0.86 -1.7 3,121,935 - Echvi_2633 0.89 -1.4 3,122,063 - +1.6 3,122,063 - -0.8 3,122,116 + +0.9 3,122,116 + +0.1 3,122,117 - -1.6 3,122,148 + -0.0 3,122,227 + -1.6 3,122,228 - Echvi_2634 0.10 +0.2 3,122,265 - Echvi_2634 0.15 +0.0 3,122,275 + Echvi_2634 0.16 -1.8 3,122,276 - Echvi_2634 0.16 +0.8 3,122,293 + Echvi_2634 0.18 -2.4 3,122,293 + Echvi_2634 0.18 -1.7 3,122,398 + Echvi_2634 0.31 -1.0 3,122,399 - Echvi_2634 0.31 -0.4 3,122,400 + Echvi_2634 0.31 -1.0 3,122,400 + Echvi_2634 0.31 -2.0 3,122,643 + Echvi_2634 0.61 -1.1 3,122,643 + Echvi_2634 0.61 -2.3 3,122,643 + Echvi_2634 0.61 +0.6 3,122,656 + Echvi_2634 0.63 -1.2 3,122,656 + Echvi_2634 0.63 -0.2 3,122,657 - Echvi_2634 0.63 +0.6 3,122,661 + Echvi_2634 0.64 -0.7 3,122,664 + Echvi_2634 0.64 -1.3 3,122,722 + Echvi_2634 0.71 -0.2 3,122,860 + Echvi_2634 0.88 -2.1 3,122,900 + +0.3 3,122,900 + +0.5 3,122,926 + -1.9 3,122,929 + -0.8 3,122,969 + +0.6 3,122,981 - -0.2 3,123,209 - Echvi_2635 0.34 +0.2 3,123,209 - Echvi_2635 0.34 -0.3 3,123,215 + Echvi_2635 0.35 -1.3 3,123,215 + Echvi_2635 0.35 -1.2 3,123,215 + Echvi_2635 0.35 -0.0 3,123,216 - Echvi_2635 0.35 -0.4 3,123,216 - Echvi_2635 0.35 +1.3 3,123,216 - Echvi_2635 0.35 -0.8 3,123,217 + Echvi_2635 0.35 -2.8 3,123,217 + Echvi_2635 0.35 -2.0 3,123,217 + Echvi_2635 0.35 -1.0 3,123,218 - Echvi_2635 0.36 -0.2 3,123,218 - Echvi_2635 0.36 +0.1 3,123,257 + Echvi_2635 0.40 -0.8 3,123,257 + Echvi_2635 0.40 -2.3 3,123,293 + Echvi_2635 0.45 -1.2 3,123,297 - Echvi_2635 0.45 -0.3 3,123,353 + Echvi_2635 0.52 -1.1 3,123,354 - Echvi_2635 0.52 +0.7 3,123,376 - Echvi_2635 0.55 +0.6 3,123,422 + Echvi_2635 0.61 -1.4 3,123,422 + Echvi_2635 0.61 -1.6 3,123,423 - Echvi_2635 0.61 +0.7 3,123,423 - Echvi_2635 0.61 -0.7 3,123,423 - Echvi_2635 0.61 +1.0 3,123,437 + Echvi_2635 0.62 +0.1 3,123,437 + Echvi_2635 0.62 -0.0 3,123,438 - Echvi_2635 0.62 +1.6 3,123,444 + Echvi_2635 0.63 +0.4 3,123,444 + Echvi_2635 0.63 -1.7 3,123,445 - Echvi_2635 0.63 +0.3 3,123,529 + Echvi_2635 0.74 -0.9 3,123,654 - Echvi_2635 0.89 -0.4 3,123,654 - Echvi_2635 0.89 +0.2 3,123,730 - -0.0 3,123,780 + -1.3 3,123,797 + -0.7 3,123,867 + +0.5 3,123,874 + +0.1 3,123,899 - -1.0 3,123,939 - -0.2 3,123,940 + -0.9 3,123,940 + -0.4 3,123,940 + -0.4 3,123,944 + +0.2
Or see this region's nucleotide sequence