Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0544 and Echvi_0545 are separated by 147 nucleotides Echvi_0545 and Echvi_0546 are separated by 73 nucleotides Echvi_0546 and Echvi_0547 are separated by 30 nucleotides
Echvi_0544: Echvi_0544 - DNA-binding transcriptional activator of the SARP family, at 608,381 to 610,894
_0544
Echvi_0545: Echvi_0545 - hypothetical protein, at 611,042 to 613,243
_0545
Echvi_0546: Echvi_0546 - hypothetical protein, at 613,317 to 614,129
_0546
Echvi_0547: Echvi_0547 - SusD family., at 614,160 to 616,307
_0547
Position (kb) 611
612
613
614 Strain fitness (log2 ratio) -2
-1
0
1
2 at 610.053 kb on + strand, within Echvi_0544 at 610.054 kb on - strand, within Echvi_0544 at 610.078 kb on - strand, within Echvi_0544 at 610.092 kb on - strand, within Echvi_0544 at 610.092 kb on - strand, within Echvi_0544 at 610.092 kb on - strand, within Echvi_0544 at 610.126 kb on + strand, within Echvi_0544 at 610.126 kb on + strand, within Echvi_0544 at 610.159 kb on + strand, within Echvi_0544 at 610.203 kb on + strand, within Echvi_0544 at 610.204 kb on - strand, within Echvi_0544 at 610.250 kb on + strand, within Echvi_0544 at 610.250 kb on + strand, within Echvi_0544 at 610.250 kb on + strand, within Echvi_0544 at 610.250 kb on + strand, within Echvi_0544 at 610.250 kb on + strand, within Echvi_0544 at 610.250 kb on + strand, within Echvi_0544 at 610.250 kb on + strand, within Echvi_0544 at 610.250 kb on + strand, within Echvi_0544 at 610.250 kb on + strand, within Echvi_0544 at 610.251 kb on - strand, within Echvi_0544 at 610.251 kb on - strand, within Echvi_0544 at 610.251 kb on - strand, within Echvi_0544 at 610.251 kb on - strand, within Echvi_0544 at 610.251 kb on - strand, within Echvi_0544 at 610.251 kb on - strand, within Echvi_0544 at 610.251 kb on - strand, within Echvi_0544 at 610.270 kb on + strand, within Echvi_0544 at 610.271 kb on - strand, within Echvi_0544 at 610.357 kb on + strand, within Echvi_0544 at 610.357 kb on + strand, within Echvi_0544 at 610.358 kb on - strand, within Echvi_0544 at 610.358 kb on - strand, within Echvi_0544 at 610.392 kb on + strand, within Echvi_0544 at 610.402 kb on + strand, within Echvi_0544 at 610.402 kb on + strand, within Echvi_0544 at 610.471 kb on + strand, within Echvi_0544 at 610.472 kb on - strand, within Echvi_0544 at 610.491 kb on - strand, within Echvi_0544 at 610.491 kb on - strand, within Echvi_0544 at 610.499 kb on + strand, within Echvi_0544 at 610.499 kb on + strand, within Echvi_0544 at 610.519 kb on + strand, within Echvi_0544 at 610.519 kb on + strand, within Echvi_0544 at 610.520 kb on - strand, within Echvi_0544 at 610.526 kb on - strand, within Echvi_0544 at 610.531 kb on + strand, within Echvi_0544 at 610.547 kb on - strand, within Echvi_0544 at 610.547 kb on - strand, within Echvi_0544 at 610.588 kb on - strand, within Echvi_0544 at 610.589 kb on + strand, within Echvi_0544 at 610.590 kb on - strand, within Echvi_0544 at 610.617 kb on + strand, within Echvi_0544 at 610.618 kb on - strand, within Echvi_0544 at 610.662 kb on + strand at 610.696 kb on + strand at 610.697 kb on - strand at 610.700 kb on - strand at 610.703 kb on - strand at 610.743 kb on + strand at 610.744 kb on - strand at 610.763 kb on + strand at 610.771 kb on + strand at 610.771 kb on + strand at 610.793 kb on - strand at 610.797 kb on + strand at 610.797 kb on + strand at 610.797 kb on + strand at 610.798 kb on - strand at 610.798 kb on - strand at 610.798 kb on - strand at 610.798 kb on - strand at 610.798 kb on - strand at 610.798 kb on - strand at 610.838 kb on + strand at 610.892 kb on + strand at 610.904 kb on + strand at 610.914 kb on - strand at 610.939 kb on + strand at 610.940 kb on - strand at 610.940 kb on - strand at 610.941 kb on + strand at 610.942 kb on - strand at 610.942 kb on - strand at 610.962 kb on - strand at 610.970 kb on - strand at 611.159 kb on - strand at 611.269 kb on - strand, within Echvi_0545 at 611.269 kb on - strand, within Echvi_0545 at 611.269 kb on - strand, within Echvi_0545 at 611.269 kb on - strand, within Echvi_0545 at 611.332 kb on - strand, within Echvi_0545 at 611.396 kb on + strand, within Echvi_0545 at 611.423 kb on - strand, within Echvi_0545 at 611.423 kb on - strand, within Echvi_0545 at 611.423 kb on - strand, within Echvi_0545 at 611.424 kb on + strand, within Echvi_0545 at 611.425 kb on - strand, within Echvi_0545 at 611.425 kb on - strand, within Echvi_0545 at 611.470 kb on - strand, within Echvi_0545 at 611.470 kb on - strand, within Echvi_0545 at 611.470 kb on - strand, within Echvi_0545 at 611.500 kb on + strand, within Echvi_0545 at 611.505 kb on - strand, within Echvi_0545 at 611.619 kb on - strand, within Echvi_0545 at 611.684 kb on + strand, within Echvi_0545 at 611.710 kb on + strand, within Echvi_0545 at 611.711 kb on - strand, within Echvi_0545 at 611.713 kb on + strand, within Echvi_0545 at 611.714 kb on - strand, within Echvi_0545 at 611.714 kb on - strand, within Echvi_0545 at 611.714 kb on - strand, within Echvi_0545 at 611.758 kb on + strand, within Echvi_0545 at 611.772 kb on + strand, within Echvi_0545 at 611.989 kb on - strand, within Echvi_0545 at 612.067 kb on + strand, within Echvi_0545 at 612.068 kb on - strand, within Echvi_0545 at 612.086 kb on - strand, within Echvi_0545 at 612.086 kb on - strand, within Echvi_0545 at 612.157 kb on + strand, within Echvi_0545 at 612.158 kb on - strand, within Echvi_0545 at 612.186 kb on + strand, within Echvi_0545 at 612.186 kb on + strand, within Echvi_0545 at 612.187 kb on - strand, within Echvi_0545 at 612.187 kb on - strand, within Echvi_0545 at 612.217 kb on - strand, within Echvi_0545 at 612.276 kb on + strand, within Echvi_0545 at 612.276 kb on + strand, within Echvi_0545 at 612.415 kb on + strand, within Echvi_0545 at 612.415 kb on + strand, within Echvi_0545 at 612.415 kb on + strand, within Echvi_0545 at 612.415 kb on + strand, within Echvi_0545 at 612.416 kb on - strand, within Echvi_0545 at 612.417 kb on + strand, within Echvi_0545 at 612.420 kb on + strand, within Echvi_0545 at 612.420 kb on + strand, within Echvi_0545 at 612.460 kb on + strand, within Echvi_0545 at 612.460 kb on + strand, within Echvi_0545 at 612.461 kb on - strand, within Echvi_0545 at 612.462 kb on + strand, within Echvi_0545 at 612.494 kb on - strand, within Echvi_0545 at 612.525 kb on + strand, within Echvi_0545 at 612.548 kb on + strand, within Echvi_0545 at 612.553 kb on - strand, within Echvi_0545 at 612.569 kb on - strand, within Echvi_0545 at 612.569 kb on - strand, within Echvi_0545 at 612.569 kb on - strand, within Echvi_0545 at 612.624 kb on + strand, within Echvi_0545 at 612.625 kb on - strand, within Echvi_0545 at 612.625 kb on - strand, within Echvi_0545 at 612.627 kb on + strand, within Echvi_0545 at 612.628 kb on - strand, within Echvi_0545 at 612.636 kb on + strand, within Echvi_0545 at 612.637 kb on - strand, within Echvi_0545 at 612.637 kb on - strand, within Echvi_0545 at 612.647 kb on - strand, within Echvi_0545 at 612.658 kb on - strand, within Echvi_0545 at 612.658 kb on - strand, within Echvi_0545 at 612.662 kb on - strand, within Echvi_0545 at 612.705 kb on + strand, within Echvi_0545 at 612.736 kb on + strand, within Echvi_0545 at 612.736 kb on + strand, within Echvi_0545 at 612.737 kb on - strand, within Echvi_0545 at 612.737 kb on - strand, within Echvi_0545 at 612.737 kb on - strand, within Echvi_0545 at 612.737 kb on - strand, within Echvi_0545 at 612.739 kb on - strand, within Echvi_0545 at 612.775 kb on - strand, within Echvi_0545 at 612.792 kb on - strand, within Echvi_0545 at 612.858 kb on + strand, within Echvi_0545 at 612.858 kb on + strand, within Echvi_0545 at 612.859 kb on - strand, within Echvi_0545 at 612.859 kb on - strand, within Echvi_0545 at 612.868 kb on + strand, within Echvi_0545 at 612.869 kb on - strand, within Echvi_0545 at 612.869 kb on - strand, within Echvi_0545 at 612.887 kb on - strand, within Echvi_0545 at 613.043 kb on - strand at 613.043 kb on - strand at 613.190 kb on - strand at 613.221 kb on + strand at 613.222 kb on - strand at 613.227 kb on - strand at 613.304 kb on - strand at 613.314 kb on + strand at 613.315 kb on - strand at 613.348 kb on + strand at 613.349 kb on - strand at 613.391 kb on + strand at 613.392 kb on - strand at 613.511 kb on + strand, within Echvi_0546 at 613.511 kb on + strand, within Echvi_0546 at 613.556 kb on - strand, within Echvi_0546 at 613.560 kb on + strand, within Echvi_0546 at 613.560 kb on + strand, within Echvi_0546 at 613.561 kb on - strand, within Echvi_0546 at 613.601 kb on + strand, within Echvi_0546 at 613.602 kb on - strand, within Echvi_0546 at 613.603 kb on + strand, within Echvi_0546 at 613.745 kb on + strand, within Echvi_0546 at 613.745 kb on + strand, within Echvi_0546 at 613.763 kb on + strand, within Echvi_0546 at 613.820 kb on + strand, within Echvi_0546 at 613.820 kb on + strand, within Echvi_0546 at 613.853 kb on + strand, within Echvi_0546 at 613.853 kb on + strand, within Echvi_0546 at 613.855 kb on + strand, within Echvi_0546 at 613.965 kb on + strand, within Echvi_0546 at 613.966 kb on - strand, within Echvi_0546 at 614.010 kb on + strand, within Echvi_0546 at 614.010 kb on + strand, within Echvi_0546 at 614.010 kb on + strand, within Echvi_0546 at 614.011 kb on - strand, within Echvi_0546 at 614.011 kb on - strand, within Echvi_0546 at 614.054 kb on - strand at 614.110 kb on - strand at 614.110 kb on - strand at 614.113 kb on + strand at 614.114 kb on - strand at 614.114 kb on - strand at 614.114 kb on - strand at 614.114 kb on - strand at 614.114 kb on - strand at 614.114 kb on - strand at 614.153 kb on + strand at 614.157 kb on - strand at 614.224 kb on + strand at 614.224 kb on + strand at 614.237 kb on + strand at 614.242 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 610,053 + Echvi_0544 0.67 +2.5 610,054 - Echvi_0544 0.67 +0.2 610,078 - Echvi_0544 0.68 -0.5 610,092 - Echvi_0544 0.68 +1.3 610,092 - Echvi_0544 0.68 +0.1 610,092 - Echvi_0544 0.68 -0.0 610,126 + Echvi_0544 0.69 +0.8 610,126 + Echvi_0544 0.69 -0.1 610,159 + Echvi_0544 0.71 -1.4 610,203 + Echvi_0544 0.72 +0.8 610,204 - Echvi_0544 0.73 -0.7 610,250 + Echvi_0544 0.74 -0.0 610,250 + Echvi_0544 0.74 -0.6 610,250 + Echvi_0544 0.74 -0.2 610,250 + Echvi_0544 0.74 +1.2 610,250 + Echvi_0544 0.74 -0.2 610,250 + Echvi_0544 0.74 +0.2 610,250 + Echvi_0544 0.74 +0.0 610,250 + Echvi_0544 0.74 -0.7 610,250 + Echvi_0544 0.74 +0.3 610,251 - Echvi_0544 0.74 -0.4 610,251 - Echvi_0544 0.74 +0.2 610,251 - Echvi_0544 0.74 -1.2 610,251 - Echvi_0544 0.74 -0.7 610,251 - Echvi_0544 0.74 +0.7 610,251 - Echvi_0544 0.74 +0.4 610,251 - Echvi_0544 0.74 +0.5 610,270 + Echvi_0544 0.75 -1.0 610,271 - Echvi_0544 0.75 +0.7 610,357 + Echvi_0544 0.79 +1.8 610,357 + Echvi_0544 0.79 +0.4 610,358 - Echvi_0544 0.79 -0.7 610,358 - Echvi_0544 0.79 +0.5 610,392 + Echvi_0544 0.80 +0.7 610,402 + Echvi_0544 0.80 +0.1 610,402 + Echvi_0544 0.80 -1.6 610,471 + Echvi_0544 0.83 -0.8 610,472 - Echvi_0544 0.83 -1.1 610,491 - Echvi_0544 0.84 -0.5 610,491 - Echvi_0544 0.84 +0.2 610,499 + Echvi_0544 0.84 +2.2 610,499 + Echvi_0544 0.84 +0.4 610,519 + Echvi_0544 0.85 -0.7 610,519 + Echvi_0544 0.85 -0.8 610,520 - Echvi_0544 0.85 +1.0 610,526 - Echvi_0544 0.85 -0.5 610,531 + Echvi_0544 0.86 +0.0 610,547 - Echvi_0544 0.86 -0.0 610,547 - Echvi_0544 0.86 +2.0 610,588 - Echvi_0544 0.88 +2.0 610,589 + Echvi_0544 0.88 -2.0 610,590 - Echvi_0544 0.88 +1.3 610,617 + Echvi_0544 0.89 -0.4 610,618 - Echvi_0544 0.89 +2.1 610,662 + +0.7 610,696 + -0.7 610,697 - -1.1 610,700 - -0.8 610,703 - +0.6 610,743 + +0.4 610,744 - +0.3 610,763 + -0.2 610,771 + +0.2 610,771 + -1.0 610,793 - -0.5 610,797 + -0.6 610,797 + +1.1 610,797 + +1.2 610,798 - +0.0 610,798 - -2.0 610,798 - -1.2 610,798 - -0.9 610,798 - +1.0 610,798 - -0.7 610,838 + +2.5 610,892 + -0.0 610,904 + +0.6 610,914 - +0.6 610,939 + -0.0 610,940 - +0.8 610,940 - -0.1 610,941 + -0.6 610,942 - -0.6 610,942 - -1.2 610,962 - -0.8 610,970 - +0.6 611,159 - -0.7 611,269 - Echvi_0545 0.10 +1.3 611,269 - Echvi_0545 0.10 +0.2 611,269 - Echvi_0545 0.10 -0.2 611,269 - Echvi_0545 0.10 -0.6 611,332 - Echvi_0545 0.13 -0.4 611,396 + Echvi_0545 0.16 -0.1 611,423 - Echvi_0545 0.17 -0.1 611,423 - Echvi_0545 0.17 +0.9 611,423 - Echvi_0545 0.17 -0.2 611,424 + Echvi_0545 0.17 -0.7 611,425 - Echvi_0545 0.17 +0.8 611,425 - Echvi_0545 0.17 -1.2 611,470 - Echvi_0545 0.19 -0.9 611,470 - Echvi_0545 0.19 +1.0 611,470 - Echvi_0545 0.19 +0.9 611,500 + Echvi_0545 0.21 -0.5 611,505 - Echvi_0545 0.21 -0.8 611,619 - Echvi_0545 0.26 -0.0 611,684 + Echvi_0545 0.29 +0.8 611,710 + Echvi_0545 0.30 -0.4 611,711 - Echvi_0545 0.30 -1.9 611,713 + Echvi_0545 0.30 -0.9 611,714 - Echvi_0545 0.31 +1.3 611,714 - Echvi_0545 0.31 +0.8 611,714 - Echvi_0545 0.31 +0.2 611,758 + Echvi_0545 0.33 +2.1 611,772 + Echvi_0545 0.33 -0.5 611,989 - Echvi_0545 0.43 -0.6 612,067 + Echvi_0545 0.47 -0.6 612,068 - Echvi_0545 0.47 -1.0 612,086 - Echvi_0545 0.47 -0.0 612,086 - Echvi_0545 0.47 -0.8 612,157 + Echvi_0545 0.51 +0.9 612,158 - Echvi_0545 0.51 +1.2 612,186 + Echvi_0545 0.52 +0.5 612,186 + Echvi_0545 0.52 +0.0 612,187 - Echvi_0545 0.52 +0.4 612,187 - Echvi_0545 0.52 +0.4 612,217 - Echvi_0545 0.53 +1.8 612,276 + Echvi_0545 0.56 -0.7 612,276 + Echvi_0545 0.56 -0.1 612,415 + Echvi_0545 0.62 -1.2 612,415 + Echvi_0545 0.62 +0.6 612,415 + Echvi_0545 0.62 -0.1 612,415 + Echvi_0545 0.62 +1.2 612,416 - Echvi_0545 0.62 +1.8 612,417 + Echvi_0545 0.62 +1.3 612,420 + Echvi_0545 0.63 +0.7 612,420 + Echvi_0545 0.63 +0.2 612,460 + Echvi_0545 0.64 -0.2 612,460 + Echvi_0545 0.64 +0.1 612,461 - Echvi_0545 0.64 -0.6 612,462 + Echvi_0545 0.64 +1.8 612,494 - Echvi_0545 0.66 -0.8 612,525 + Echvi_0545 0.67 +0.4 612,548 + Echvi_0545 0.68 +0.3 612,553 - Echvi_0545 0.69 -0.1 612,569 - Echvi_0545 0.69 +1.0 612,569 - Echvi_0545 0.69 -0.5 612,569 - Echvi_0545 0.69 -0.5 612,624 + Echvi_0545 0.72 -0.9 612,625 - Echvi_0545 0.72 -0.0 612,625 - Echvi_0545 0.72 -0.3 612,627 + Echvi_0545 0.72 +0.4 612,628 - Echvi_0545 0.72 -0.1 612,636 + Echvi_0545 0.72 -0.6 612,637 - Echvi_0545 0.72 -0.2 612,637 - Echvi_0545 0.72 +0.6 612,647 - Echvi_0545 0.73 -0.7 612,658 - Echvi_0545 0.73 +1.2 612,658 - Echvi_0545 0.73 +0.3 612,662 - Echvi_0545 0.74 +0.8 612,705 + Echvi_0545 0.76 +1.2 612,736 + Echvi_0545 0.77 +1.1 612,736 + Echvi_0545 0.77 -0.8 612,737 - Echvi_0545 0.77 +0.5 612,737 - Echvi_0545 0.77 -1.1 612,737 - Echvi_0545 0.77 +0.2 612,737 - Echvi_0545 0.77 -1.5 612,739 - Echvi_0545 0.77 -0.7 612,775 - Echvi_0545 0.79 +0.8 612,792 - Echvi_0545 0.79 -0.8 612,858 + Echvi_0545 0.82 +0.1 612,858 + Echvi_0545 0.82 +0.0 612,859 - Echvi_0545 0.83 +1.8 612,859 - Echvi_0545 0.83 +1.3 612,868 + Echvi_0545 0.83 +1.8 612,869 - Echvi_0545 0.83 +1.8 612,869 - Echvi_0545 0.83 -0.0 612,887 - Echvi_0545 0.84 +0.3 613,043 - +1.3 613,043 - -0.7 613,190 - -1.8 613,221 + +0.2 613,222 - +0.4 613,227 - +0.3 613,304 - -0.6 613,314 + -0.3 613,315 - -0.7 613,348 + +0.3 613,349 - -0.8 613,391 + -1.7 613,392 - +0.1 613,511 + Echvi_0546 0.24 -0.8 613,511 + Echvi_0546 0.24 +0.3 613,556 - Echvi_0546 0.29 -1.4 613,560 + Echvi_0546 0.30 +1.2 613,560 + Echvi_0546 0.30 +1.4 613,561 - Echvi_0546 0.30 +1.5 613,601 + Echvi_0546 0.35 +0.3 613,602 - Echvi_0546 0.35 -0.2 613,603 + Echvi_0546 0.35 -0.6 613,745 + Echvi_0546 0.53 +0.2 613,745 + Echvi_0546 0.53 -0.4 613,763 + Echvi_0546 0.55 -0.4 613,820 + Echvi_0546 0.62 -1.6 613,820 + Echvi_0546 0.62 +0.3 613,853 + Echvi_0546 0.66 -0.1 613,853 + Echvi_0546 0.66 -1.4 613,855 + Echvi_0546 0.66 +0.0 613,965 + Echvi_0546 0.80 +0.8 613,966 - Echvi_0546 0.80 -0.9 614,010 + Echvi_0546 0.85 +2.1 614,010 + Echvi_0546 0.85 -0.7 614,010 + Echvi_0546 0.85 +0.6 614,011 - Echvi_0546 0.85 -1.0 614,011 - Echvi_0546 0.85 -0.3 614,054 - -1.0 614,110 - +1.1 614,110 - -0.9 614,113 + +0.4 614,114 - +0.2 614,114 - -0.6 614,114 - -0.3 614,114 - -0.0 614,114 - -2.3 614,114 - +0.8 614,153 + -0.1 614,157 - +0.6 614,224 + +1.1 614,224 + -1.6 614,237 + -0.0 614,242 + +0.8
Or see this region's nucleotide sequence