Experiment: P2_phage_0.5625_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03914 and ECD_03915 are separated by 109 nucleotides ECD_03915 and ECD_03916 are separated by 18 nucleotides ECD_03916 and ECD_03917 are separated by 115 nucleotides ECD_03917 and ECD_03918 are separated by 41 nucleotides
ECD_03914: ECD_03914 - diacylglycerol kinase, at 4,164,009 to 4,164,377
_03914
ECD_03915: ECD_03915 - transcriptional repressor of SOS regulon, at 4,164,487 to 4,165,095
_03915
ECD_03916: ECD_03916 - oxidative stress resistance protein; putative MATE family efflux pump; UV and mitomycin C inducible protein, at 4,165,114 to 4,166,493
_03916
ECD_03917: ECD_03917 - stress-induced protein, UPF0337 family, at 4,166,609 to 4,166,818
_03917
ECD_03918: ECD_03918 - transcriptional repressor, Zn(II)-binding, at 4,166,860 to 4,167,375
_03918
Position (kb)
4165
4166
4167 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4164.296 kb on + strand, within ECD_03914 at 4164.407 kb on + strand at 4165.094 kb on - strand at 4165.098 kb on + strand at 4165.098 kb on + strand at 4165.098 kb on + strand at 4165.098 kb on + strand at 4165.098 kb on + strand at 4165.099 kb on - strand at 4165.361 kb on + strand, within ECD_03916 at 4165.396 kb on + strand, within ECD_03916 at 4165.397 kb on - strand, within ECD_03916 at 4165.397 kb on - strand, within ECD_03916 at 4165.397 kb on - strand, within ECD_03916 at 4165.397 kb on - strand, within ECD_03916 at 4165.397 kb on - strand, within ECD_03916 at 4165.473 kb on - strand, within ECD_03916 at 4165.489 kb on - strand, within ECD_03916 at 4165.527 kb on + strand, within ECD_03916 at 4165.611 kb on - strand, within ECD_03916 at 4165.623 kb on - strand, within ECD_03916 at 4165.636 kb on + strand, within ECD_03916 at 4165.662 kb on - strand, within ECD_03916 at 4165.719 kb on + strand, within ECD_03916 at 4165.719 kb on + strand, within ECD_03916 at 4165.720 kb on - strand, within ECD_03916 at 4165.788 kb on - strand, within ECD_03916 at 4165.797 kb on + strand, within ECD_03916 at 4165.937 kb on + strand, within ECD_03916 at 4165.937 kb on + strand, within ECD_03916 at 4165.937 kb on + strand, within ECD_03916 at 4165.937 kb on + strand, within ECD_03916 at 4166.011 kb on + strand, within ECD_03916 at 4166.062 kb on + strand, within ECD_03916 at 4166.063 kb on - strand, within ECD_03916 at 4166.063 kb on - strand, within ECD_03916 at 4166.063 kb on - strand, within ECD_03916 at 4166.152 kb on + strand, within ECD_03916 at 4166.152 kb on + strand, within ECD_03916 at 4166.229 kb on + strand, within ECD_03916 at 4166.229 kb on + strand, within ECD_03916 at 4166.270 kb on - strand, within ECD_03916 at 4166.289 kb on + strand, within ECD_03916 at 4166.289 kb on + strand, within ECD_03916 at 4166.291 kb on + strand, within ECD_03916 at 4166.538 kb on + strand at 4166.538 kb on + strand at 4166.544 kb on + strand at 4166.544 kb on + strand at 4166.545 kb on - strand at 4166.573 kb on + strand at 4166.574 kb on - strand at 4166.574 kb on - strand at 4166.574 kb on - strand at 4166.590 kb on + strand at 4166.653 kb on + strand, within ECD_03917 at 4166.653 kb on + strand, within ECD_03917 at 4166.654 kb on - strand, within ECD_03917 at 4166.692 kb on + strand, within ECD_03917 at 4166.692 kb on + strand, within ECD_03917 at 4166.693 kb on - strand, within ECD_03917 at 4166.693 kb on - strand, within ECD_03917 at 4166.710 kb on + strand, within ECD_03917 at 4166.711 kb on - strand, within ECD_03917 at 4166.807 kb on + strand at 4166.816 kb on + strand at 4166.817 kb on - strand at 4166.820 kb on + strand at 4166.821 kb on - strand at 4166.974 kb on - strand, within ECD_03918 at 4167.010 kb on - strand, within ECD_03918 at 4167.010 kb on - strand, within ECD_03918 at 4167.010 kb on - strand, within ECD_03918 at 4167.072 kb on + strand, within ECD_03918 at 4167.073 kb on - strand, within ECD_03918 at 4167.078 kb on + strand, within ECD_03918 at 4167.078 kb on + strand, within ECD_03918 at 4167.078 kb on + strand, within ECD_03918 at 4167.079 kb on - strand, within ECD_03918 at 4167.079 kb on - strand, within ECD_03918 at 4167.079 kb on - strand, within ECD_03918 at 4167.087 kb on + strand, within ECD_03918 at 4167.088 kb on - strand, within ECD_03918 at 4167.123 kb on - strand, within ECD_03918 at 4167.242 kb on + strand, within ECD_03918 at 4167.347 kb on - strand at 4167.347 kb on - strand at 4167.409 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI remove 4,164,296 + ECD_03914 0.78 +0.6 4,164,407 + -2.6 4,165,094 - -1.4 4,165,098 + +0.4 4,165,098 + -1.9 4,165,098 + -0.1 4,165,098 + -1.9 4,165,098 + -0.2 4,165,099 - -2.4 4,165,361 + ECD_03916 0.18 -2.2 4,165,396 + ECD_03916 0.20 -0.6 4,165,397 - ECD_03916 0.21 -2.5 4,165,397 - ECD_03916 0.21 +0.3 4,165,397 - ECD_03916 0.21 -0.1 4,165,397 - ECD_03916 0.21 +1.2 4,165,397 - ECD_03916 0.21 +1.2 4,165,473 - ECD_03916 0.26 +0.6 4,165,489 - ECD_03916 0.27 -0.7 4,165,527 + ECD_03916 0.30 -1.4 4,165,611 - ECD_03916 0.36 +0.7 4,165,623 - ECD_03916 0.37 -1.4 4,165,636 + ECD_03916 0.38 +0.6 4,165,662 - ECD_03916 0.40 -3.4 4,165,719 + ECD_03916 0.44 -0.1 4,165,719 + ECD_03916 0.44 +0.1 4,165,720 - ECD_03916 0.44 +1.2 4,165,788 - ECD_03916 0.49 -0.3 4,165,797 + ECD_03916 0.49 -2.7 4,165,937 + ECD_03916 0.60 -0.5 4,165,937 + ECD_03916 0.60 -1.9 4,165,937 + ECD_03916 0.60 +0.0 4,165,937 + ECD_03916 0.60 -0.9 4,166,011 + ECD_03916 0.65 -2.2 4,166,062 + ECD_03916 0.69 -0.3 4,166,063 - ECD_03916 0.69 -1.2 4,166,063 - ECD_03916 0.69 -0.1 4,166,063 - ECD_03916 0.69 +1.6 4,166,152 + ECD_03916 0.75 +0.1 4,166,152 + ECD_03916 0.75 -2.4 4,166,229 + ECD_03916 0.81 -1.2 4,166,229 + ECD_03916 0.81 +1.3 4,166,270 - ECD_03916 0.84 -1.2 4,166,289 + ECD_03916 0.85 +0.1 4,166,289 + ECD_03916 0.85 -1.3 4,166,291 + ECD_03916 0.85 -0.7 4,166,538 + -3.1 4,166,538 + +0.0 4,166,544 + +1.3 4,166,544 + -0.1 4,166,545 - -1.0 4,166,573 + +0.6 4,166,574 - -0.8 4,166,574 - -2.1 4,166,574 - +1.2 4,166,590 + -0.2 4,166,653 + ECD_03917 0.21 +0.6 4,166,653 + ECD_03917 0.21 -1.4 4,166,654 - ECD_03917 0.21 -2.5 4,166,692 + ECD_03917 0.40 +1.0 4,166,692 + ECD_03917 0.40 +1.5 4,166,693 - ECD_03917 0.40 -1.0 4,166,693 - ECD_03917 0.40 -0.2 4,166,710 + ECD_03917 0.48 +1.8 4,166,711 - ECD_03917 0.49 -3.1 4,166,807 + -0.4 4,166,816 + -2.2 4,166,817 - -0.3 4,166,820 + -0.4 4,166,821 - +0.4 4,166,974 - ECD_03918 0.22 -0.2 4,167,010 - ECD_03918 0.29 +1.0 4,167,010 - ECD_03918 0.29 +0.9 4,167,010 - ECD_03918 0.29 +2.0 4,167,072 + ECD_03918 0.41 +2.0 4,167,073 - ECD_03918 0.41 +1.1 4,167,078 + ECD_03918 0.42 -2.5 4,167,078 + ECD_03918 0.42 +0.5 4,167,078 + ECD_03918 0.42 -2.3 4,167,079 - ECD_03918 0.42 +0.9 4,167,079 - ECD_03918 0.42 +2.0 4,167,079 - ECD_03918 0.42 -0.5 4,167,087 + ECD_03918 0.44 +1.3 4,167,088 - ECD_03918 0.44 +0.1 4,167,123 - ECD_03918 0.51 +1.1 4,167,242 + ECD_03918 0.74 -0.2 4,167,347 - -2.3 4,167,347 - +3.5 4,167,409 + -1.5
Or see this region's nucleotide sequence