Experiment: P2_phage_0.5625_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03845 and ECD_03846 are separated by 266 nucleotides ECD_03846 and ECD_03847 overlap by 18 nucleotides
ECD_03845: ECD_03845 - argininosuccinate lyase, at 4,065,151 to 4,066,524
_03845
ECD_03846: ECD_03846 - oxidative and nitrosative stress transcriptional regulator, at 4,066,791 to 4,067,708
_03846
ECD_03847: ECD_03847 - pyridine nucleotide transhydrogenase, soluble, at 4,067,691 to 4,069,091
_03847
Position (kb)
4066
4067
4068 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 4065.820 kb on - strand, within ECD_03845 at 4066.099 kb on + strand, within ECD_03845 at 4066.099 kb on + strand, within ECD_03845 at 4066.110 kb on + strand, within ECD_03845 at 4066.110 kb on + strand, within ECD_03845 at 4066.110 kb on + strand, within ECD_03845 at 4066.111 kb on - strand, within ECD_03845 at 4066.149 kb on + strand, within ECD_03845 at 4066.308 kb on + strand, within ECD_03845 at 4066.309 kb on - strand, within ECD_03845 at 4066.309 kb on - strand, within ECD_03845 at 4066.523 kb on - strand at 4066.532 kb on + strand at 4066.533 kb on - strand at 4066.533 kb on - strand at 4066.533 kb on - strand at 4066.534 kb on + strand at 4066.534 kb on + strand at 4066.535 kb on - strand at 4066.535 kb on - strand at 4066.535 kb on - strand at 4066.535 kb on - strand at 4066.535 kb on - strand at 4066.539 kb on - strand at 4066.541 kb on - strand at 4066.574 kb on - strand at 4066.625 kb on - strand at 4066.628 kb on + strand at 4066.629 kb on - strand at 4066.673 kb on + strand at 4066.673 kb on + strand at 4066.674 kb on - strand at 4066.707 kb on - strand at 4066.745 kb on + strand at 4066.751 kb on - strand at 4066.767 kb on + strand at 4066.796 kb on + strand at 4066.997 kb on + strand, within ECD_03846 at 4067.114 kb on + strand, within ECD_03846 at 4067.114 kb on + strand, within ECD_03846 at 4067.114 kb on + strand, within ECD_03846 at 4067.114 kb on + strand, within ECD_03846 at 4067.114 kb on + strand, within ECD_03846 at 4067.114 kb on + strand, within ECD_03846 at 4067.115 kb on - strand, within ECD_03846 at 4067.117 kb on + strand, within ECD_03846 at 4067.117 kb on + strand, within ECD_03846 at 4067.158 kb on - strand, within ECD_03846 at 4067.186 kb on - strand, within ECD_03846 at 4067.294 kb on + strand, within ECD_03846 at 4067.294 kb on + strand, within ECD_03846 at 4067.295 kb on - strand, within ECD_03846 at 4067.298 kb on + strand, within ECD_03846 at 4067.298 kb on + strand, within ECD_03846 at 4067.298 kb on + strand, within ECD_03846 at 4067.299 kb on - strand, within ECD_03846 at 4067.299 kb on - strand, within ECD_03846 at 4067.492 kb on + strand, within ECD_03846 at 4067.556 kb on + strand, within ECD_03846 at 4067.557 kb on - strand, within ECD_03846 at 4067.604 kb on + strand, within ECD_03846 at 4067.635 kb on - strand at 4067.756 kb on + strand at 4067.756 kb on + strand at 4067.756 kb on + strand at 4067.757 kb on - strand at 4067.757 kb on - strand at 4067.757 kb on - strand at 4067.757 kb on - strand at 4068.041 kb on - strand, within ECD_03847 at 4068.056 kb on + strand, within ECD_03847 at 4068.196 kb on + strand, within ECD_03847 at 4068.197 kb on - strand, within ECD_03847 at 4068.197 kb on - strand, within ECD_03847 at 4068.197 kb on - strand, within ECD_03847 at 4068.418 kb on + strand, within ECD_03847 at 4068.547 kb on + strand, within ECD_03847 at 4068.548 kb on - strand, within ECD_03847 at 4068.548 kb on - strand, within ECD_03847 at 4068.551 kb on + strand, within ECD_03847 at 4068.551 kb on + strand, within ECD_03847 at 4068.552 kb on - strand, within ECD_03847 at 4068.556 kb on - strand, within ECD_03847 at 4068.556 kb on - strand, within ECD_03847 at 4068.556 kb on - strand, within ECD_03847 at 4068.556 kb on - strand, within ECD_03847 at 4068.601 kb on + strand, within ECD_03847
Per-strain Table
Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI remove 4,065,820 - ECD_03845 0.49 +0.2 4,066,099 + ECD_03845 0.69 +1.4 4,066,099 + ECD_03845 0.69 -0.5 4,066,110 + ECD_03845 0.70 -1.3 4,066,110 + ECD_03845 0.70 -0.9 4,066,110 + ECD_03845 0.70 +2.1 4,066,111 - ECD_03845 0.70 -2.4 4,066,149 + ECD_03845 0.73 +1.4 4,066,308 + ECD_03845 0.84 -0.8 4,066,309 - ECD_03845 0.84 -0.2 4,066,309 - ECD_03845 0.84 -1.8 4,066,523 - +0.2 4,066,532 + +1.4 4,066,533 - -1.2 4,066,533 - +0.2 4,066,533 - -2.8 4,066,534 + +0.5 4,066,534 + +1.5 4,066,535 - +1.3 4,066,535 - +0.8 4,066,535 - +0.0 4,066,535 - -2.0 4,066,535 - -3.3 4,066,539 - -0.3 4,066,541 - +1.0 4,066,574 - -0.8 4,066,625 - +1.4 4,066,628 + -0.6 4,066,629 - +0.4 4,066,673 + +0.2 4,066,673 + -1.1 4,066,674 - +1.8 4,066,707 - +1.2 4,066,745 + -1.1 4,066,751 - -3.7 4,066,767 + -2.8 4,066,796 + -3.5 4,066,997 + ECD_03846 0.22 -5.1 4,067,114 + ECD_03846 0.35 -4.0 4,067,114 + ECD_03846 0.35 -2.8 4,067,114 + ECD_03846 0.35 -4.0 4,067,114 + ECD_03846 0.35 -2.5 4,067,114 + ECD_03846 0.35 -3.1 4,067,114 + ECD_03846 0.35 -3.9 4,067,115 - ECD_03846 0.35 -4.2 4,067,117 + ECD_03846 0.36 -3.2 4,067,117 + ECD_03846 0.36 -5.1 4,067,158 - ECD_03846 0.40 -2.7 4,067,186 - ECD_03846 0.43 -4.0 4,067,294 + ECD_03846 0.55 -4.1 4,067,294 + ECD_03846 0.55 -5.5 4,067,295 - ECD_03846 0.55 -1.4 4,067,298 + ECD_03846 0.55 -2.2 4,067,298 + ECD_03846 0.55 -3.7 4,067,298 + ECD_03846 0.55 -2.0 4,067,299 - ECD_03846 0.55 -0.8 4,067,299 - ECD_03846 0.55 -3.6 4,067,492 + ECD_03846 0.76 -2.0 4,067,556 + ECD_03846 0.83 -2.9 4,067,557 - ECD_03846 0.83 -3.1 4,067,604 + ECD_03846 0.89 -3.8 4,067,635 - -1.5 4,067,756 + -2.4 4,067,756 + -0.5 4,067,756 + -3.3 4,067,757 - -3.2 4,067,757 - -2.4 4,067,757 - -1.0 4,067,757 - -0.9 4,068,041 - ECD_03847 0.25 -3.4 4,068,056 + ECD_03847 0.26 -1.0 4,068,196 + ECD_03847 0.36 -1.7 4,068,197 - ECD_03847 0.36 -2.2 4,068,197 - ECD_03847 0.36 -0.5 4,068,197 - ECD_03847 0.36 -1.5 4,068,418 + ECD_03847 0.52 -1.1 4,068,547 + ECD_03847 0.61 -1.2 4,068,548 - ECD_03847 0.61 -0.8 4,068,548 - ECD_03847 0.61 -0.5 4,068,551 + ECD_03847 0.61 -0.9 4,068,551 + ECD_03847 0.61 -0.8 4,068,552 - ECD_03847 0.61 -2.0 4,068,556 - ECD_03847 0.62 -0.8 4,068,556 - ECD_03847 0.62 +0.1 4,068,556 - ECD_03847 0.62 -2.4 4,068,556 - ECD_03847 0.62 -2.4 4,068,601 + ECD_03847 0.65 -0.5
Or see this region's nucleotide sequence