Experiment: P2_phage_0.5625_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03761 and ECD_03762 are separated by 39 nucleotides ECD_03762 and ECD_03763 are separated by 24 nucleotides
ECD_03761: ECD_03761 - putative sulfoquinovose importer, at 3,971,060 to 3,972,463
_03761
ECD_03762: ECD_03762 - putative 2,3-dihydroxypropane-1-sulfonate exporter, membrane protein, at 3,972,503 to 3,973,909
_03762
ECD_03763: ECD_03763 - putative sulfolipid alpha-glucosidase; alpha-glucosyl fluoride glucosidase, at 3,973,934 to 3,975,937
_03763
Position (kb)
3972
3973
3974 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3971.534 kb on + strand, within ECD_03761 at 3971.656 kb on + strand, within ECD_03761 at 3971.671 kb on - strand, within ECD_03761 at 3971.679 kb on + strand, within ECD_03761 at 3971.682 kb on + strand, within ECD_03761 at 3971.800 kb on + strand, within ECD_03761 at 3971.826 kb on + strand, within ECD_03761 at 3971.847 kb on + strand, within ECD_03761 at 3971.887 kb on + strand, within ECD_03761 at 3971.887 kb on + strand, within ECD_03761 at 3971.888 kb on - strand, within ECD_03761 at 3971.972 kb on + strand, within ECD_03761 at 3972.032 kb on - strand, within ECD_03761 at 3972.054 kb on + strand, within ECD_03761 at 3972.095 kb on - strand, within ECD_03761 at 3972.121 kb on + strand, within ECD_03761 at 3972.189 kb on + strand, within ECD_03761 at 3972.190 kb on - strand, within ECD_03761 at 3972.190 kb on - strand, within ECD_03761 at 3972.191 kb on + strand, within ECD_03761 at 3972.196 kb on + strand, within ECD_03761 at 3972.217 kb on + strand, within ECD_03761 at 3972.218 kb on - strand, within ECD_03761 at 3972.315 kb on + strand, within ECD_03761 at 3972.315 kb on + strand, within ECD_03761 at 3972.315 kb on + strand, within ECD_03761 at 3972.373 kb on + strand at 3972.373 kb on + strand at 3972.373 kb on + strand at 3972.381 kb on - strand at 3972.437 kb on + strand at 3972.437 kb on + strand at 3972.473 kb on + strand at 3972.475 kb on - strand at 3972.475 kb on - strand at 3972.475 kb on - strand at 3972.475 kb on - strand at 3972.476 kb on + strand at 3972.498 kb on + strand at 3972.502 kb on - strand at 3972.502 kb on - strand at 3972.528 kb on - strand at 3972.549 kb on + strand at 3972.549 kb on + strand at 3972.549 kb on + strand at 3972.549 kb on + strand at 3972.549 kb on + strand at 3972.549 kb on + strand at 3972.550 kb on - strand at 3972.550 kb on - strand at 3972.550 kb on - strand at 3972.550 kb on - strand at 3972.550 kb on - strand at 3972.550 kb on - strand at 3972.550 kb on - strand at 3972.570 kb on + strand at 3972.571 kb on - strand at 3972.587 kb on + strand at 3972.588 kb on - strand at 3972.618 kb on + strand at 3972.619 kb on - strand at 3972.763 kb on - strand, within ECD_03762 at 3972.961 kb on - strand, within ECD_03762 at 3973.007 kb on + strand, within ECD_03762 at 3973.114 kb on + strand, within ECD_03762 at 3973.239 kb on + strand, within ECD_03762 at 3973.239 kb on + strand, within ECD_03762 at 3973.239 kb on + strand, within ECD_03762 at 3973.274 kb on - strand, within ECD_03762 at 3973.470 kb on + strand, within ECD_03762 at 3973.503 kb on + strand, within ECD_03762 at 3973.583 kb on + strand, within ECD_03762 at 3973.584 kb on - strand, within ECD_03762 at 3973.584 kb on - strand, within ECD_03762 at 3973.606 kb on - strand, within ECD_03762 at 3973.628 kb on - strand, within ECD_03762 at 3973.663 kb on + strand, within ECD_03762 at 3973.664 kb on - strand, within ECD_03762 at 3973.773 kb on + strand at 3973.801 kb on + strand at 3973.802 kb on - strand at 3973.819 kb on + strand at 3973.935 kb on + strand at 3973.935 kb on + strand at 3973.935 kb on + strand at 3973.935 kb on + strand at 3973.935 kb on + strand at 3973.936 kb on - strand at 3973.936 kb on - strand at 3973.936 kb on - strand at 3973.946 kb on + strand at 3974.071 kb on + strand at 3974.072 kb on - strand at 3974.144 kb on + strand, within ECD_03763 at 3974.151 kb on + strand, within ECD_03763 at 3974.151 kb on + strand, within ECD_03763 at 3974.151 kb on + strand, within ECD_03763 at 3974.152 kb on - strand, within ECD_03763 at 3974.157 kb on + strand, within ECD_03763 at 3974.169 kb on + strand, within ECD_03763 at 3974.169 kb on + strand, within ECD_03763 at 3974.170 kb on - strand, within ECD_03763 at 3974.170 kb on - strand, within ECD_03763 at 3974.290 kb on + strand, within ECD_03763 at 3974.580 kb on + strand, within ECD_03763 at 3974.580 kb on + strand, within ECD_03763 at 3974.658 kb on + strand, within ECD_03763 at 3974.658 kb on + strand, within ECD_03763 at 3974.659 kb on - strand, within ECD_03763 at 3974.659 kb on - strand, within ECD_03763 at 3974.662 kb on + strand, within ECD_03763 at 3974.663 kb on - strand, within ECD_03763 at 3974.663 kb on - strand, within ECD_03763 at 3974.693 kb on - strand, within ECD_03763 at 3974.698 kb on + strand, within ECD_03763 at 3974.727 kb on + strand, within ECD_03763 at 3974.727 kb on + strand, within ECD_03763 at 3974.728 kb on - strand, within ECD_03763 at 3974.728 kb on - strand, within ECD_03763 at 3974.746 kb on - strand, within ECD_03763 at 3974.823 kb on + strand, within ECD_03763 at 3974.883 kb on + strand, within ECD_03763 at 3974.883 kb on + strand, within ECD_03763 at 3974.883 kb on + strand, within ECD_03763 at 3974.884 kb on - strand, within ECD_03763
Per-strain Table
Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI remove 3,971,534 + ECD_03761 0.34 +0.1 3,971,656 + ECD_03761 0.42 +0.8 3,971,671 - ECD_03761 0.44 -1.8 3,971,679 + ECD_03761 0.44 +0.8 3,971,682 + ECD_03761 0.44 -2.7 3,971,800 + ECD_03761 0.53 -0.2 3,971,826 + ECD_03761 0.55 +1.1 3,971,847 + ECD_03761 0.56 -3.7 3,971,887 + ECD_03761 0.59 +0.4 3,971,887 + ECD_03761 0.59 +1.3 3,971,888 - ECD_03761 0.59 -0.9 3,971,972 + ECD_03761 0.65 +1.7 3,972,032 - ECD_03761 0.69 +0.4 3,972,054 + ECD_03761 0.71 +0.1 3,972,095 - ECD_03761 0.74 -1.8 3,972,121 + ECD_03761 0.76 -1.0 3,972,189 + ECD_03761 0.80 +1.3 3,972,190 - ECD_03761 0.80 -3.2 3,972,190 - ECD_03761 0.80 +0.8 3,972,191 + ECD_03761 0.81 +1.7 3,972,196 + ECD_03761 0.81 -0.2 3,972,217 + ECD_03761 0.82 -0.1 3,972,218 - ECD_03761 0.82 +1.4 3,972,315 + ECD_03761 0.89 +2.0 3,972,315 + ECD_03761 0.89 -3.0 3,972,315 + ECD_03761 0.89 -0.7 3,972,373 + +0.7 3,972,373 + +1.1 3,972,373 + -1.7 3,972,381 - -1.7 3,972,437 + +1.0 3,972,437 + +0.7 3,972,473 + +2.9 3,972,475 - +0.1 3,972,475 - -0.0 3,972,475 - +2.7 3,972,475 - +1.7 3,972,476 + -0.5 3,972,498 + +0.5 3,972,502 - -1.1 3,972,502 - +2.7 3,972,528 - -2.0 3,972,549 + +0.8 3,972,549 + +0.8 3,972,549 + -0.4 3,972,549 + -0.4 3,972,549 + +1.1 3,972,549 + +1.8 3,972,550 - -0.4 3,972,550 - -3.2 3,972,550 - -0.6 3,972,550 - +1.5 3,972,550 - +1.6 3,972,550 - -0.1 3,972,550 - -1.9 3,972,570 + +1.9 3,972,571 - -1.4 3,972,587 + +1.9 3,972,588 - -2.2 3,972,618 + +1.1 3,972,619 - +1.5 3,972,763 - ECD_03762 0.18 +0.4 3,972,961 - ECD_03762 0.33 +1.3 3,973,007 + ECD_03762 0.36 -2.0 3,973,114 + ECD_03762 0.43 +0.7 3,973,239 + ECD_03762 0.52 -0.1 3,973,239 + ECD_03762 0.52 -0.4 3,973,239 + ECD_03762 0.52 +0.7 3,973,274 - ECD_03762 0.55 -2.3 3,973,470 + ECD_03762 0.69 +0.0 3,973,503 + ECD_03762 0.71 -2.2 3,973,583 + ECD_03762 0.77 -1.1 3,973,584 - ECD_03762 0.77 +2.5 3,973,584 - ECD_03762 0.77 +0.9 3,973,606 - ECD_03762 0.78 +3.5 3,973,628 - ECD_03762 0.80 +1.2 3,973,663 + ECD_03762 0.82 -3.2 3,973,664 - ECD_03762 0.83 +0.9 3,973,773 + +0.5 3,973,801 + +0.2 3,973,802 - +1.6 3,973,819 + +1.2 3,973,935 + +2.3 3,973,935 + -0.4 3,973,935 + +0.4 3,973,935 + +1.1 3,973,935 + -0.4 3,973,936 - -1.7 3,973,936 - +0.7 3,973,936 - -0.9 3,973,946 + -2.7 3,974,071 + +1.3 3,974,072 - -2.2 3,974,144 + ECD_03763 0.10 +2.0 3,974,151 + ECD_03763 0.11 +1.4 3,974,151 + ECD_03763 0.11 +1.9 3,974,151 + ECD_03763 0.11 -0.9 3,974,152 - ECD_03763 0.11 +0.4 3,974,157 + ECD_03763 0.11 +0.6 3,974,169 + ECD_03763 0.12 -0.8 3,974,169 + ECD_03763 0.12 +0.9 3,974,170 - ECD_03763 0.12 -0.2 3,974,170 - ECD_03763 0.12 +0.5 3,974,290 + ECD_03763 0.18 -1.2 3,974,580 + ECD_03763 0.32 -0.8 3,974,580 + ECD_03763 0.32 +0.7 3,974,658 + ECD_03763 0.36 +3.7 3,974,658 + ECD_03763 0.36 -2.1 3,974,659 - ECD_03763 0.36 +0.2 3,974,659 - ECD_03763 0.36 -2.3 3,974,662 + ECD_03763 0.36 +1.2 3,974,663 - ECD_03763 0.36 +1.8 3,974,663 - ECD_03763 0.36 -1.2 3,974,693 - ECD_03763 0.38 +0.5 3,974,698 + ECD_03763 0.38 +1.6 3,974,727 + ECD_03763 0.40 +0.5 3,974,727 + ECD_03763 0.40 +1.8 3,974,728 - ECD_03763 0.40 -0.9 3,974,728 - ECD_03763 0.40 -1.8 3,974,746 - ECD_03763 0.41 +2.1 3,974,823 + ECD_03763 0.44 +1.9 3,974,883 + ECD_03763 0.47 -3.1 3,974,883 + ECD_03763 0.47 -2.2 3,974,883 + ECD_03763 0.47 +2.3 3,974,884 - ECD_03763 0.47 +1.0
Or see this region's nucleotide sequence