Strain Fitness in Escherichia coli BL21 around ECD_03719

Experiment: P2_phage_0.5625_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03718 and ECD_03719 are separated by 33 nucleotidesECD_03719 and ECD_03720 are separated by 12 nucleotidesECD_03720 and ECD_03721 are separated by 13 nucleotides ECD_03718: ECD_03718 - uridine phosphorylase, at 3,917,790 to 3,918,554 _03718 ECD_03719: ECD_03719 - hypothetical protein, at 3,918,588 to 3,920,078 _03719 ECD_03720: ECD_03720 - hypothetical protein, at 3,920,091 to 3,920,600 _03720 ECD_03721: ECD_03721 - hypothetical protein, at 3,920,614 to 3,921,588 _03721 Position (kb) 3918 3919 3920 3921Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 3917.648 kb on - strandat 3917.648 kb on - strandat 3917.648 kb on - strandat 3917.648 kb on - strandat 3917.710 kb on + strandat 3917.711 kb on - strandat 3917.711 kb on - strandat 3917.787 kb on + strandat 3917.787 kb on + strandat 3917.787 kb on + strandat 3917.787 kb on + strandat 3917.787 kb on + strandat 3917.787 kb on + strandat 3917.787 kb on + strandat 3917.788 kb on - strandat 3917.788 kb on - strandat 3917.788 kb on - strandat 3917.788 kb on - strandat 3917.788 kb on - strandat 3917.788 kb on - strandat 3917.788 kb on - strandat 3917.788 kb on - strandat 3917.788 kb on - strandat 3917.788 kb on - strandat 3917.788 kb on - strandat 3917.788 kb on - strandat 3917.788 kb on - strandat 3917.788 kb on - strandat 3917.788 kb on - strandat 3917.788 kb on - strandat 3917.789 kb on + strandat 3917.789 kb on + strandat 3917.789 kb on + strandat 3917.789 kb on + strandat 3917.790 kb on - strandat 3917.790 kb on - strandat 3917.790 kb on - strandat 3917.790 kb on - strandat 3917.790 kb on - strandat 3917.825 kb on + strandat 3917.846 kb on + strandat 3917.846 kb on + strandat 3917.966 kb on + strand, within ECD_03718at 3917.966 kb on + strand, within ECD_03718at 3917.966 kb on + strand, within ECD_03718at 3918.008 kb on + strand, within ECD_03718at 3918.008 kb on + strand, within ECD_03718at 3918.009 kb on - strand, within ECD_03718at 3918.015 kb on - strand, within ECD_03718at 3918.015 kb on - strand, within ECD_03718at 3918.015 kb on - strand, within ECD_03718at 3918.092 kb on + strand, within ECD_03718at 3918.093 kb on - strand, within ECD_03718at 3918.095 kb on + strand, within ECD_03718at 3918.095 kb on + strand, within ECD_03718at 3918.096 kb on - strand, within ECD_03718at 3918.197 kb on + strand, within ECD_03718at 3918.198 kb on - strand, within ECD_03718at 3918.269 kb on + strand, within ECD_03718at 3918.270 kb on - strand, within ECD_03718at 3918.276 kb on + strand, within ECD_03718at 3918.276 kb on + strand, within ECD_03718at 3918.277 kb on - strand, within ECD_03718at 3918.299 kb on + strand, within ECD_03718at 3918.300 kb on - strand, within ECD_03718at 3918.300 kb on - strand, within ECD_03718at 3918.303 kb on + strand, within ECD_03718at 3918.304 kb on - strand, within ECD_03718at 3918.304 kb on - strand, within ECD_03718at 3918.304 kb on - strand, within ECD_03718at 3918.330 kb on - strand, within ECD_03718at 3918.330 kb on - strand, within ECD_03718at 3918.338 kb on + strand, within ECD_03718at 3918.338 kb on + strand, within ECD_03718at 3918.338 kb on + strand, within ECD_03718at 3918.338 kb on + strand, within ECD_03718at 3918.339 kb on - strand, within ECD_03718at 3918.339 kb on - strand, within ECD_03718at 3918.339 kb on - strand, within ECD_03718at 3918.372 kb on + strand, within ECD_03718at 3918.372 kb on + strand, within ECD_03718at 3918.372 kb on + strand, within ECD_03718at 3918.373 kb on - strand, within ECD_03718at 3918.373 kb on - strand, within ECD_03718at 3918.432 kb on - strand, within ECD_03718at 3918.589 kb on + strandat 3918.590 kb on - strandat 3918.590 kb on - strandat 3918.610 kb on - strandat 3918.639 kb on - strandat 3918.731 kb on + strandat 3918.831 kb on - strand, within ECD_03719at 3918.865 kb on + strand, within ECD_03719at 3918.865 kb on + strand, within ECD_03719at 3918.866 kb on - strand, within ECD_03719at 3918.908 kb on + strand, within ECD_03719at 3918.909 kb on - strand, within ECD_03719at 3918.909 kb on - strand, within ECD_03719at 3918.966 kb on + strand, within ECD_03719at 3918.966 kb on + strand, within ECD_03719at 3918.966 kb on + strand, within ECD_03719at 3918.966 kb on + strand, within ECD_03719at 3918.966 kb on + strand, within ECD_03719at 3918.969 kb on + strand, within ECD_03719at 3918.970 kb on - strand, within ECD_03719at 3919.007 kb on + strand, within ECD_03719at 3919.007 kb on + strand, within ECD_03719at 3919.007 kb on + strand, within ECD_03719at 3919.007 kb on + strand, within ECD_03719at 3919.007 kb on + strand, within ECD_03719at 3919.008 kb on - strand, within ECD_03719at 3919.008 kb on - strand, within ECD_03719at 3919.008 kb on - strand, within ECD_03719at 3919.008 kb on - strand, within ECD_03719at 3919.008 kb on - strand, within ECD_03719at 3919.008 kb on - strand, within ECD_03719at 3919.008 kb on - strand, within ECD_03719at 3919.008 kb on - strand, within ECD_03719at 3919.008 kb on - strand, within ECD_03719at 3919.009 kb on + strand, within ECD_03719at 3919.009 kb on + strand, within ECD_03719at 3919.009 kb on + strand, within ECD_03719at 3919.010 kb on - strand, within ECD_03719at 3919.010 kb on - strand, within ECD_03719at 3919.010 kb on - strand, within ECD_03719at 3919.010 kb on - strand, within ECD_03719at 3919.010 kb on - strand, within ECD_03719at 3919.124 kb on + strand, within ECD_03719at 3919.124 kb on + strand, within ECD_03719at 3919.124 kb on + strand, within ECD_03719at 3919.125 kb on - strand, within ECD_03719at 3919.125 kb on - strand, within ECD_03719at 3919.125 kb on - strand, within ECD_03719at 3919.125 kb on - strand, within ECD_03719at 3919.125 kb on - strand, within ECD_03719at 3919.125 kb on - strand, within ECD_03719at 3919.128 kb on + strand, within ECD_03719at 3919.129 kb on - strand, within ECD_03719at 3919.196 kb on + strand, within ECD_03719at 3919.217 kb on + strand, within ECD_03719at 3919.339 kb on - strand, within ECD_03719at 3919.460 kb on + strand, within ECD_03719at 3919.497 kb on - strand, within ECD_03719at 3919.531 kb on - strand, within ECD_03719at 3919.575 kb on - strand, within ECD_03719at 3919.674 kb on + strand, within ECD_03719at 3919.674 kb on + strand, within ECD_03719at 3919.847 kb on + strand, within ECD_03719at 3919.847 kb on + strand, within ECD_03719at 3919.848 kb on - strand, within ECD_03719at 3919.848 kb on - strand, within ECD_03719at 3919.848 kb on - strand, within ECD_03719at 3919.848 kb on - strand, within ECD_03719at 3919.858 kb on + strand, within ECD_03719at 3920.037 kb on + strandat 3920.037 kb on + strandat 3920.038 kb on - strandat 3920.038 kb on - strandat 3920.219 kb on + strand, within ECD_03720at 3920.243 kb on + strand, within ECD_03720at 3920.243 kb on + strand, within ECD_03720at 3920.244 kb on - strand, within ECD_03720at 3920.244 kb on - strand, within ECD_03720at 3920.244 kb on - strand, within ECD_03720at 3920.244 kb on - strand, within ECD_03720at 3920.244 kb on - strand, within ECD_03720at 3920.246 kb on + strand, within ECD_03720at 3920.247 kb on - strand, within ECD_03720at 3920.247 kb on - strand, within ECD_03720at 3920.247 kb on - strand, within ECD_03720at 3920.263 kb on + strand, within ECD_03720at 3920.263 kb on + strand, within ECD_03720at 3920.264 kb on - strand, within ECD_03720at 3920.279 kb on + strand, within ECD_03720at 3920.279 kb on + strand, within ECD_03720at 3920.280 kb on - strand, within ECD_03720at 3920.281 kb on + strand, within ECD_03720at 3920.281 kb on + strand, within ECD_03720at 3920.281 kb on + strand, within ECD_03720at 3920.282 kb on - strand, within ECD_03720at 3920.282 kb on - strand, within ECD_03720at 3920.282 kb on - strand, within ECD_03720at 3920.282 kb on - strand, within ECD_03720at 3920.282 kb on - strand, within ECD_03720at 3920.379 kb on + strand, within ECD_03720at 3920.419 kb on + strand, within ECD_03720at 3920.419 kb on + strand, within ECD_03720at 3920.419 kb on + strand, within ECD_03720at 3920.419 kb on + strand, within ECD_03720at 3920.419 kb on + strand, within ECD_03720at 3920.419 kb on + strand, within ECD_03720at 3920.419 kb on + strand, within ECD_03720at 3920.419 kb on + strand, within ECD_03720at 3920.420 kb on - strand, within ECD_03720at 3920.420 kb on - strand, within ECD_03720at 3920.420 kb on - strand, within ECD_03720at 3920.420 kb on - strand, within ECD_03720at 3920.427 kb on - strand, within ECD_03720at 3920.427 kb on - strand, within ECD_03720at 3920.487 kb on - strand, within ECD_03720at 3920.517 kb on + strand, within ECD_03720at 3920.517 kb on + strand, within ECD_03720at 3920.518 kb on - strand, within ECD_03720at 3920.518 kb on - strand, within ECD_03720at 3920.604 kb on + strandat 3920.708 kb on + strandat 3920.708 kb on + strandat 3920.708 kb on + strandat 3920.708 kb on + strandat 3920.708 kb on + strandat 3920.708 kb on + strandat 3920.708 kb on + strandat 3920.708 kb on + strandat 3920.708 kb on + strandat 3920.708 kb on + strandat 3920.708 kb on + strandat 3920.708 kb on + strandat 3920.709 kb on - strandat 3920.709 kb on - strandat 3920.709 kb on - strandat 3920.709 kb on - strandat 3920.709 kb on - strandat 3920.709 kb on - strandat 3920.709 kb on - strandat 3920.709 kb on - strandat 3920.709 kb on - strandat 3920.709 kb on - strandat 3920.952 kb on + strand, within ECD_03721at 3920.952 kb on + strand, within ECD_03721at 3920.953 kb on - strand, within ECD_03721at 3920.968 kb on + strand, within ECD_03721at 3921.007 kb on - strand, within ECD_03721

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Per-strain Table

Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI
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3,917,648 - +1.0
3,917,648 - +0.5
3,917,648 - +0.7
3,917,648 - +1.1
3,917,710 + -1.4
3,917,711 - +2.1
3,917,711 - +0.6
3,917,787 + +1.3
3,917,787 + -1.1
3,917,787 + +0.2
3,917,787 + +1.8
3,917,787 + +2.4
3,917,787 + +0.6
3,917,787 + -1.5
3,917,788 - -1.2
3,917,788 - +0.3
3,917,788 - +0.8
3,917,788 - -0.9
3,917,788 - -1.3
3,917,788 - +0.4
3,917,788 - +0.5
3,917,788 - +1.4
3,917,788 - +0.2
3,917,788 - +1.2
3,917,788 - +1.1
3,917,788 - +1.9
3,917,788 - +0.5
3,917,788 - -0.7
3,917,788 - +1.7
3,917,788 - -0.3
3,917,789 + +0.4
3,917,789 + +1.9
3,917,789 + +2.1
3,917,789 + -0.9
3,917,790 - +2.0
3,917,790 - -0.6
3,917,790 - +1.3
3,917,790 - -0.7
3,917,790 - -1.3
3,917,825 + +0.9
3,917,846 + +0.3
3,917,846 + +0.0
3,917,966 + ECD_03718 0.23 +0.6
3,917,966 + ECD_03718 0.23 +0.5
3,917,966 + ECD_03718 0.23 -2.8
3,918,008 + ECD_03718 0.28 +0.9
3,918,008 + ECD_03718 0.28 +1.6
3,918,009 - ECD_03718 0.29 +0.1
3,918,015 - ECD_03718 0.29 +1.2
3,918,015 - ECD_03718 0.29 +0.0
3,918,015 - ECD_03718 0.29 -2.3
3,918,092 + ECD_03718 0.39 -1.1
3,918,093 - ECD_03718 0.40 +1.0
3,918,095 + ECD_03718 0.40 +0.5
3,918,095 + ECD_03718 0.40 -1.3
3,918,096 - ECD_03718 0.40 -3.4
3,918,197 + ECD_03718 0.53 -0.0
3,918,198 - ECD_03718 0.53 -0.5
3,918,269 + ECD_03718 0.63 -0.9
3,918,270 - ECD_03718 0.63 +0.1
3,918,276 + ECD_03718 0.64 +0.5
3,918,276 + ECD_03718 0.64 -0.9
3,918,277 - ECD_03718 0.64 -1.2
3,918,299 + ECD_03718 0.67 +1.3
3,918,300 - ECD_03718 0.67 -0.6
3,918,300 - ECD_03718 0.67 -1.8
3,918,303 + ECD_03718 0.67 -1.0
3,918,304 - ECD_03718 0.67 +0.8
3,918,304 - ECD_03718 0.67 -0.2
3,918,304 - ECD_03718 0.67 +0.0
3,918,330 - ECD_03718 0.71 +0.9
3,918,330 - ECD_03718 0.71 +1.1
3,918,338 + ECD_03718 0.72 +1.4
3,918,338 + ECD_03718 0.72 +0.7
3,918,338 + ECD_03718 0.72 +0.3
3,918,338 + ECD_03718 0.72 +0.7
3,918,339 - ECD_03718 0.72 -1.2
3,918,339 - ECD_03718 0.72 -0.9
3,918,339 - ECD_03718 0.72 +0.3
3,918,372 + ECD_03718 0.76 -0.5
3,918,372 + ECD_03718 0.76 -0.9
3,918,372 + ECD_03718 0.76 +0.3
3,918,373 - ECD_03718 0.76 -0.1
3,918,373 - ECD_03718 0.76 -0.4
3,918,432 - ECD_03718 0.84 +0.5
3,918,589 + +0.7
3,918,590 - -2.3
3,918,590 - +2.4
3,918,610 - +0.8
3,918,639 - +0.3
3,918,731 + -0.1
3,918,831 - ECD_03719 0.16 +1.3
3,918,865 + ECD_03719 0.19 +0.7
3,918,865 + ECD_03719 0.19 -0.3
3,918,866 - ECD_03719 0.19 -1.5
3,918,908 + ECD_03719 0.21 +0.2
3,918,909 - ECD_03719 0.22 +0.3
3,918,909 - ECD_03719 0.22 -2.3
3,918,966 + ECD_03719 0.25 -0.8
3,918,966 + ECD_03719 0.25 +2.5
3,918,966 + ECD_03719 0.25 +2.2
3,918,966 + ECD_03719 0.25 -1.1
3,918,966 + ECD_03719 0.25 -0.4
3,918,969 + ECD_03719 0.26 -0.3
3,918,970 - ECD_03719 0.26 +0.5
3,919,007 + ECD_03719 0.28 -0.3
3,919,007 + ECD_03719 0.28 -2.8
3,919,007 + ECD_03719 0.28 +0.3
3,919,007 + ECD_03719 0.28 -1.3
3,919,007 + ECD_03719 0.28 +1.2
3,919,008 - ECD_03719 0.28 -3.7
3,919,008 - ECD_03719 0.28 +1.7
3,919,008 - ECD_03719 0.28 +0.8
3,919,008 - ECD_03719 0.28 +1.5
3,919,008 - ECD_03719 0.28 +1.7
3,919,008 - ECD_03719 0.28 -1.8
3,919,008 - ECD_03719 0.28 -4.1
3,919,008 - ECD_03719 0.28 +1.6
3,919,008 - ECD_03719 0.28 +2.4
3,919,009 + ECD_03719 0.28 -1.9
3,919,009 + ECD_03719 0.28 -2.7
3,919,009 + ECD_03719 0.28 -0.3
3,919,010 - ECD_03719 0.28 +2.1
3,919,010 - ECD_03719 0.28 -0.1
3,919,010 - ECD_03719 0.28 +0.0
3,919,010 - ECD_03719 0.28 -0.7
3,919,010 - ECD_03719 0.28 -1.2
3,919,124 + ECD_03719 0.36 -0.3
3,919,124 + ECD_03719 0.36 -1.7
3,919,124 + ECD_03719 0.36 +0.2
3,919,125 - ECD_03719 0.36 -2.1
3,919,125 - ECD_03719 0.36 -0.8
3,919,125 - ECD_03719 0.36 +1.6
3,919,125 - ECD_03719 0.36 -1.4
3,919,125 - ECD_03719 0.36 +2.7
3,919,125 - ECD_03719 0.36 +2.9
3,919,128 + ECD_03719 0.36 -1.1
3,919,129 - ECD_03719 0.36 -1.8
3,919,196 + ECD_03719 0.41 -0.1
3,919,217 + ECD_03719 0.42 -0.5
3,919,339 - ECD_03719 0.50 +0.1
3,919,460 + ECD_03719 0.58 +0.2
3,919,497 - ECD_03719 0.61 +0.9
3,919,531 - ECD_03719 0.63 +0.2
3,919,575 - ECD_03719 0.66 -0.7
3,919,674 + ECD_03719 0.73 +0.6
3,919,674 + ECD_03719 0.73 +0.3
3,919,847 + ECD_03719 0.84 +0.6
3,919,847 + ECD_03719 0.84 -0.2
3,919,848 - ECD_03719 0.85 +0.5
3,919,848 - ECD_03719 0.85 -0.4
3,919,848 - ECD_03719 0.85 +0.3
3,919,848 - ECD_03719 0.85 +0.5
3,919,858 + ECD_03719 0.85 -2.5
3,920,037 + +1.2
3,920,037 + +1.3
3,920,038 - -0.9
3,920,038 - +1.8
3,920,219 + ECD_03720 0.25 +1.2
3,920,243 + ECD_03720 0.30 -2.4
3,920,243 + ECD_03720 0.30 +1.7
3,920,244 - ECD_03720 0.30 -0.5
3,920,244 - ECD_03720 0.30 +0.8
3,920,244 - ECD_03720 0.30 -1.7
3,920,244 - ECD_03720 0.30 +0.1
3,920,244 - ECD_03720 0.30 -0.9
3,920,246 + ECD_03720 0.30 +0.1
3,920,247 - ECD_03720 0.31 +1.1
3,920,247 - ECD_03720 0.31 +0.3
3,920,247 - ECD_03720 0.31 -2.8
3,920,263 + ECD_03720 0.34 +0.7
3,920,263 + ECD_03720 0.34 -1.3
3,920,264 - ECD_03720 0.34 -0.3
3,920,279 + ECD_03720 0.37 -0.3
3,920,279 + ECD_03720 0.37 -3.4
3,920,280 - ECD_03720 0.37 +1.7
3,920,281 + ECD_03720 0.37 +2.1
3,920,281 + ECD_03720 0.37 +1.8
3,920,281 + ECD_03720 0.37 +0.8
3,920,282 - ECD_03720 0.37 +1.7
3,920,282 - ECD_03720 0.37 +2.0
3,920,282 - ECD_03720 0.37 +1.3
3,920,282 - ECD_03720 0.37 -0.5
3,920,282 - ECD_03720 0.37 +0.6
3,920,379 + ECD_03720 0.56 -1.8
3,920,419 + ECD_03720 0.64 +0.8
3,920,419 + ECD_03720 0.64 +2.9
3,920,419 + ECD_03720 0.64 -1.5
3,920,419 + ECD_03720 0.64 +2.6
3,920,419 + ECD_03720 0.64 +0.8
3,920,419 + ECD_03720 0.64 +0.2
3,920,419 + ECD_03720 0.64 +1.6
3,920,419 + ECD_03720 0.64 +0.0
3,920,420 - ECD_03720 0.65 +1.7
3,920,420 - ECD_03720 0.65 +0.9
3,920,420 - ECD_03720 0.65 -1.8
3,920,420 - ECD_03720 0.65 +1.6
3,920,427 - ECD_03720 0.66 +1.9
3,920,427 - ECD_03720 0.66 -2.1
3,920,487 - ECD_03720 0.78 +1.1
3,920,517 + ECD_03720 0.84 +0.3
3,920,517 + ECD_03720 0.84 +0.4
3,920,518 - ECD_03720 0.84 +2.4
3,920,518 - ECD_03720 0.84 +0.3
3,920,604 + +0.6
3,920,708 + -1.9
3,920,708 + -1.5
3,920,708 + +2.6
3,920,708 + -3.7
3,920,708 + -0.8
3,920,708 + +2.2
3,920,708 + -0.5
3,920,708 + +1.1
3,920,708 + -0.5
3,920,708 + -2.1
3,920,708 + -1.0
3,920,708 + +2.4
3,920,709 - +1.4
3,920,709 - -1.3
3,920,709 - -0.9
3,920,709 - +1.0
3,920,709 - +1.4
3,920,709 - +0.8
3,920,709 - +0.6
3,920,709 - +0.5
3,920,709 - +0.4
3,920,709 - +0.8
3,920,952 + ECD_03721 0.35 +0.3
3,920,952 + ECD_03721 0.35 -1.0
3,920,953 - ECD_03721 0.35 +0.9
3,920,968 + ECD_03721 0.36 -0.8
3,921,007 - ECD_03721 0.40 -0.5

Or see this region's nucleotide sequence