Experiment: P2_phage_0.5625_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03582 and ECD_03583 are separated by 28 nucleotides ECD_03583 and ECD_03584 overlap by 1 nucleotides
ECD_03582: ECD_03582 - DNA gyrase, subunit B, at 3,766,501 to 3,768,915
_03582
ECD_03583: ECD_03583 - gap repair protein, at 3,768,944 to 3,770,017
_03583
ECD_03584: ECD_03584 - DNA polymerase III, beta subunit, at 3,770,017 to 3,771,117
_03584
Position (kb)
3768
3769
3770
3771 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3769.005 kb on - strand at 3769.115 kb on + strand, within ECD_03583 at 3769.115 kb on + strand, within ECD_03583 at 3769.116 kb on - strand, within ECD_03583 at 3769.123 kb on - strand, within ECD_03583 at 3769.175 kb on + strand, within ECD_03583 at 3769.175 kb on + strand, within ECD_03583 at 3769.176 kb on - strand, within ECD_03583 at 3769.195 kb on + strand, within ECD_03583 at 3769.216 kb on + strand, within ECD_03583 at 3769.216 kb on + strand, within ECD_03583 at 3769.216 kb on + strand, within ECD_03583 at 3769.216 kb on + strand, within ECD_03583 at 3769.217 kb on - strand, within ECD_03583 at 3769.217 kb on - strand, within ECD_03583 at 3769.250 kb on + strand, within ECD_03583 at 3769.250 kb on + strand, within ECD_03583 at 3769.251 kb on - strand, within ECD_03583 at 3769.251 kb on - strand, within ECD_03583 at 3769.281 kb on + strand, within ECD_03583 at 3769.282 kb on - strand, within ECD_03583 at 3769.330 kb on - strand, within ECD_03583 at 3769.330 kb on - strand, within ECD_03583 at 3769.403 kb on - strand, within ECD_03583 at 3769.496 kb on + strand, within ECD_03583 at 3769.496 kb on + strand, within ECD_03583 at 3769.496 kb on + strand, within ECD_03583 at 3769.626 kb on + strand, within ECD_03583 at 3769.627 kb on - strand, within ECD_03583 at 3769.627 kb on - strand, within ECD_03583 at 3769.651 kb on + strand, within ECD_03583 at 3769.652 kb on - strand, within ECD_03583 at 3769.652 kb on - strand, within ECD_03583 at 3769.708 kb on + strand, within ECD_03583 at 3769.708 kb on + strand, within ECD_03583 at 3769.708 kb on + strand, within ECD_03583 at 3769.709 kb on - strand, within ECD_03583 at 3769.709 kb on - strand, within ECD_03583 at 3769.885 kb on + strand, within ECD_03583 at 3769.885 kb on + strand, within ECD_03583 at 3769.887 kb on + strand, within ECD_03583 at 3769.887 kb on + strand, within ECD_03583 at 3769.888 kb on - strand, within ECD_03583 at 3769.888 kb on - strand, within ECD_03583 at 3769.888 kb on - strand, within ECD_03583 at 3769.888 kb on - strand, within ECD_03583 at 3769.931 kb on + strand at 3769.943 kb on - strand at 3769.955 kb on + strand at 3770.018 kb on + strand at 3770.018 kb on + strand at 3770.019 kb on - strand at 3770.019 kb on - strand at 3770.019 kb on - strand at 3770.019 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI remove 3,769,005 - -4.1 3,769,115 + ECD_03583 0.16 -3.8 3,769,115 + ECD_03583 0.16 -1.7 3,769,116 - ECD_03583 0.16 -3.2 3,769,123 - ECD_03583 0.17 -3.4 3,769,175 + ECD_03583 0.22 -2.9 3,769,175 + ECD_03583 0.22 -1.1 3,769,176 - ECD_03583 0.22 -2.2 3,769,195 + ECD_03583 0.23 -3.5 3,769,216 + ECD_03583 0.25 -1.4 3,769,216 + ECD_03583 0.25 -0.5 3,769,216 + ECD_03583 0.25 -4.1 3,769,216 + ECD_03583 0.25 -3.1 3,769,217 - ECD_03583 0.25 -2.4 3,769,217 - ECD_03583 0.25 -3.9 3,769,250 + ECD_03583 0.28 -4.6 3,769,250 + ECD_03583 0.28 -3.3 3,769,251 - ECD_03583 0.29 -1.3 3,769,251 - ECD_03583 0.29 -4.2 3,769,281 + ECD_03583 0.31 -4.7 3,769,282 - ECD_03583 0.31 -2.5 3,769,330 - ECD_03583 0.36 -3.0 3,769,330 - ECD_03583 0.36 -3.1 3,769,403 - ECD_03583 0.43 -3.4 3,769,496 + ECD_03583 0.51 -1.6 3,769,496 + ECD_03583 0.51 -1.1 3,769,496 + ECD_03583 0.51 -1.7 3,769,626 + ECD_03583 0.64 -2.3 3,769,627 - ECD_03583 0.64 -5.4 3,769,627 - ECD_03583 0.64 -4.6 3,769,651 + ECD_03583 0.66 -2.8 3,769,652 - ECD_03583 0.66 -3.9 3,769,652 - ECD_03583 0.66 -3.5 3,769,708 + ECD_03583 0.71 -2.7 3,769,708 + ECD_03583 0.71 -1.1 3,769,708 + ECD_03583 0.71 -4.1 3,769,709 - ECD_03583 0.71 -3.5 3,769,709 - ECD_03583 0.71 -4.4 3,769,885 + ECD_03583 0.88 -4.4 3,769,885 + ECD_03583 0.88 -3.7 3,769,887 + ECD_03583 0.88 -2.8 3,769,887 + ECD_03583 0.88 -3.8 3,769,888 - ECD_03583 0.88 -4.3 3,769,888 - ECD_03583 0.88 -1.9 3,769,888 - ECD_03583 0.88 -3.3 3,769,888 - ECD_03583 0.88 +0.1 3,769,931 + -2.9 3,769,943 - -2.6 3,769,955 + -1.4 3,770,018 + -1.4 3,770,018 + -2.7 3,770,019 - +1.3 3,770,019 - -2.6 3,770,019 - -2.0 3,770,019 - +0.5
Or see this region's nucleotide sequence