Experiment: P2_phage_0.5625_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03532 and ECD_03533 are separated by 64 nucleotides ECD_03533 and ECD_03534 are separated by 42 nucleotides ECD_03534 and ECD_03535 are separated by 26 nucleotides ECD_03535 and ECD_03536 overlap by 44 nucleotides
ECD_03532: ECD_03532 - hypothetical protein, at 3,720,330 to 3,720,743
_03532
ECD_03533: ECD_03533 - hypothetical protein, at 3,720,808 to 3,720,990
_03533
ECD_03534: ECD_03534 - hypothetical protein, at 3,721,033 to 3,721,179
_03534
ECD_03535: ECD_03535 - putative IS protein, at 3,721,206 to 3,721,562
_03535
ECD_03536: ECD_03536 - IS30 transposase, at 3,721,519 to 3,722,643
_03536
ECD_03537: ECD_03537 - putative uncharacterized protein, yeeV-like protein, at 3,722,541 to 3,722,906
_03537
Position (kb)
3721
3722 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3720.450 kb on + strand, within ECD_03532 at 3720.450 kb on + strand, within ECD_03532 at 3720.499 kb on + strand, within ECD_03532 at 3720.500 kb on - strand, within ECD_03532 at 3720.573 kb on + strand, within ECD_03532 at 3721.061 kb on + strand, within ECD_03534 at 3721.071 kb on + strand, within ECD_03534 at 3721.113 kb on + strand, within ECD_03534 at 3721.162 kb on + strand, within ECD_03534 at 3721.341 kb on + strand, within ECD_03535 at 3721.361 kb on + strand, within ECD_03535 at 3721.364 kb on + strand, within ECD_03535 at 3721.460 kb on - strand, within ECD_03535 at 3721.565 kb on + strand at 3721.565 kb on + strand at 3721.635 kb on + strand, within ECD_03536 at 3721.636 kb on - strand, within ECD_03536 at 3721.658 kb on + strand, within ECD_03536 at 3721.685 kb on + strand, within ECD_03536 at 3721.757 kb on + strand, within ECD_03536 at 3721.761 kb on + strand, within ECD_03536 at 3721.761 kb on + strand, within ECD_03536 at 3721.761 kb on + strand, within ECD_03536 at 3721.761 kb on + strand, within ECD_03536 at 3721.762 kb on - strand, within ECD_03536 at 3721.762 kb on - strand, within ECD_03536 at 3721.762 kb on - strand, within ECD_03536 at 3721.762 kb on - strand, within ECD_03536 at 3721.762 kb on - strand, within ECD_03536 at 3721.826 kb on - strand, within ECD_03536 at 3721.829 kb on - strand, within ECD_03536 at 3721.845 kb on + strand, within ECD_03536 at 3721.845 kb on + strand, within ECD_03536 at 3721.846 kb on - strand, within ECD_03536 at 3721.889 kb on + strand, within ECD_03536 at 3721.905 kb on - strand, within ECD_03536 at 3721.962 kb on - strand, within ECD_03536 at 3721.962 kb on - strand, within ECD_03536 at 3721.962 kb on - strand, within ECD_03536 at 3722.039 kb on - strand, within ECD_03536 at 3722.060 kb on + strand, within ECD_03536 at 3722.073 kb on + strand, within ECD_03536 at 3722.073 kb on + strand, within ECD_03536 at 3722.074 kb on - strand, within ECD_03536 at 3722.074 kb on - strand, within ECD_03536 at 3722.075 kb on + strand, within ECD_03536 at 3722.075 kb on + strand, within ECD_03536 at 3722.075 kb on + strand, within ECD_03536 at 3722.076 kb on - strand, within ECD_03536 at 3722.098 kb on - strand, within ECD_03536 at 3722.142 kb on + strand, within ECD_03536 at 3722.148 kb on + strand, within ECD_03536 at 3722.149 kb on - strand, within ECD_03536 at 3722.149 kb on - strand, within ECD_03536 at 3722.153 kb on + strand, within ECD_03536 at 3722.153 kb on + strand, within ECD_03536 at 3722.153 kb on + strand, within ECD_03536 at 3722.154 kb on - strand, within ECD_03536 at 3722.154 kb on - strand, within ECD_03536 at 3722.154 kb on - strand, within ECD_03536 at 3722.231 kb on + strand, within ECD_03536 at 3722.232 kb on - strand, within ECD_03536 at 3722.256 kb on + strand, within ECD_03536 at 3722.257 kb on - strand, within ECD_03536 at 3722.258 kb on + strand, within ECD_03536 at 3722.258 kb on + strand, within ECD_03536 at 3722.259 kb on - strand, within ECD_03536 at 3722.288 kb on - strand, within ECD_03536 at 3722.289 kb on + strand, within ECD_03536 at 3722.289 kb on + strand, within ECD_03536 at 3722.424 kb on - strand, within ECD_03536 at 3722.430 kb on + strand, within ECD_03536 at 3722.513 kb on + strand, within ECD_03536 at 3722.524 kb on + strand, within ECD_03536
Per-strain Table
Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI remove 3,720,450 + ECD_03532 0.29 +0.1 3,720,450 + ECD_03532 0.29 +2.6 3,720,499 + ECD_03532 0.41 +1.1 3,720,500 - ECD_03532 0.41 -1.1 3,720,573 + ECD_03532 0.59 -0.8 3,721,061 + ECD_03534 0.19 -1.2 3,721,071 + ECD_03534 0.26 -0.2 3,721,113 + ECD_03534 0.54 -3.8 3,721,162 + ECD_03534 0.88 -1.2 3,721,341 + ECD_03535 0.38 -0.2 3,721,361 + ECD_03535 0.43 +2.1 3,721,364 + ECD_03535 0.44 +0.3 3,721,460 - ECD_03535 0.71 +0.4 3,721,565 + -0.4 3,721,565 + -4.1 3,721,635 + ECD_03536 0.10 -3.1 3,721,636 - ECD_03536 0.10 -2.8 3,721,658 + ECD_03536 0.12 +2.5 3,721,685 + ECD_03536 0.15 -2.4 3,721,757 + ECD_03536 0.21 +1.2 3,721,761 + ECD_03536 0.22 -0.1 3,721,761 + ECD_03536 0.22 -1.0 3,721,761 + ECD_03536 0.22 -0.1 3,721,761 + ECD_03536 0.22 +1.8 3,721,762 - ECD_03536 0.22 -0.4 3,721,762 - ECD_03536 0.22 -0.4 3,721,762 - ECD_03536 0.22 +1.4 3,721,762 - ECD_03536 0.22 -1.5 3,721,762 - ECD_03536 0.22 -0.5 3,721,826 - ECD_03536 0.27 +1.6 3,721,829 - ECD_03536 0.28 +0.7 3,721,845 + ECD_03536 0.29 +0.2 3,721,845 + ECD_03536 0.29 +0.8 3,721,846 - ECD_03536 0.29 -0.9 3,721,889 + ECD_03536 0.33 +1.2 3,721,905 - ECD_03536 0.34 -1.2 3,721,962 - ECD_03536 0.39 +0.4 3,721,962 - ECD_03536 0.39 -2.7 3,721,962 - ECD_03536 0.39 +0.1 3,722,039 - ECD_03536 0.46 +0.2 3,722,060 + ECD_03536 0.48 -0.4 3,722,073 + ECD_03536 0.49 -2.1 3,722,073 + ECD_03536 0.49 +0.8 3,722,074 - ECD_03536 0.49 -3.2 3,722,074 - ECD_03536 0.49 -2.8 3,722,075 + ECD_03536 0.49 +0.6 3,722,075 + ECD_03536 0.49 +0.5 3,722,075 + ECD_03536 0.49 -2.0 3,722,076 - ECD_03536 0.50 +0.8 3,722,098 - ECD_03536 0.51 -2.6 3,722,142 + ECD_03536 0.55 +1.8 3,722,148 + ECD_03536 0.56 +0.8 3,722,149 - ECD_03536 0.56 -1.2 3,722,149 - ECD_03536 0.56 -0.6 3,722,153 + ECD_03536 0.56 +1.8 3,722,153 + ECD_03536 0.56 -0.9 3,722,153 + ECD_03536 0.56 +1.2 3,722,154 - ECD_03536 0.56 -1.0 3,722,154 - ECD_03536 0.56 +0.9 3,722,154 - ECD_03536 0.56 +0.3 3,722,231 + ECD_03536 0.63 +0.2 3,722,232 - ECD_03536 0.63 +0.7 3,722,256 + ECD_03536 0.66 -2.0 3,722,257 - ECD_03536 0.66 +1.0 3,722,258 + ECD_03536 0.66 +0.3 3,722,258 + ECD_03536 0.66 +2.2 3,722,259 - ECD_03536 0.66 -0.5 3,722,288 - ECD_03536 0.68 +0.9 3,722,289 + ECD_03536 0.68 -0.7 3,722,289 + ECD_03536 0.68 -2.0 3,722,424 - ECD_03536 0.80 +1.6 3,722,430 + ECD_03536 0.81 +0.4 3,722,513 + ECD_03536 0.88 +0.0 3,722,524 + ECD_03536 0.89 -2.8
Or see this region's nucleotide sequence