Experiment: P2_phage_0.5625_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03370 and ECD_03371 are separated by 410 nucleotides ECD_03371 and ECD_03372 are separated by 181 nucleotides
ECD_03370: ECD_03370 - inner membrane putative BrbK family alternate lipid exporter, at 3,534,550 to 3,535,563
_03370
ECD_03371: ECD_03371 - putative MFS transporter; membrane protein, at 3,535,974 to 3,537,296
_03371
ECD_03372: ECD_03372 - putative inner membrane-anchored periplasmic AsmA family protein, at 3,537,478 to 3,539,538
_03372
Position (kb)
3535
3536
3537
3538 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3535.088 kb on + strand, within ECD_03370 at 3535.188 kb on + strand, within ECD_03370 at 3535.274 kb on - strand, within ECD_03370 at 3535.274 kb on - strand, within ECD_03370 at 3535.274 kb on - strand, within ECD_03370 at 3535.274 kb on - strand, within ECD_03370 at 3535.359 kb on + strand, within ECD_03370 at 3535.393 kb on + strand, within ECD_03370 at 3535.394 kb on - strand, within ECD_03370 at 3535.394 kb on - strand, within ECD_03370 at 3535.664 kb on + strand at 3535.675 kb on + strand at 3535.761 kb on - strand at 3535.836 kb on + strand at 3535.936 kb on - strand at 3535.936 kb on - strand at 3536.013 kb on + strand at 3536.013 kb on + strand at 3536.013 kb on + strand at 3536.013 kb on + strand at 3536.013 kb on + strand at 3536.014 kb on - strand at 3536.036 kb on + strand at 3536.094 kb on + strand at 3536.095 kb on - strand at 3536.095 kb on - strand at 3536.126 kb on + strand, within ECD_03371 at 3536.127 kb on - strand, within ECD_03371 at 3536.164 kb on + strand, within ECD_03371 at 3536.389 kb on + strand, within ECD_03371 at 3536.457 kb on + strand, within ECD_03371 at 3536.458 kb on - strand, within ECD_03371 at 3536.458 kb on - strand, within ECD_03371 at 3536.579 kb on + strand, within ECD_03371 at 3536.579 kb on + strand, within ECD_03371 at 3536.613 kb on + strand, within ECD_03371 at 3536.613 kb on + strand, within ECD_03371 at 3536.614 kb on - strand, within ECD_03371 at 3536.614 kb on - strand, within ECD_03371 at 3536.614 kb on - strand, within ECD_03371 at 3536.614 kb on - strand, within ECD_03371 at 3536.614 kb on - strand, within ECD_03371 at 3536.614 kb on - strand, within ECD_03371 at 3536.614 kb on - strand, within ECD_03371 at 3536.614 kb on - strand, within ECD_03371 at 3536.741 kb on + strand, within ECD_03371 at 3536.742 kb on - strand, within ECD_03371 at 3536.742 kb on - strand, within ECD_03371 at 3536.754 kb on + strand, within ECD_03371 at 3536.754 kb on + strand, within ECD_03371 at 3536.754 kb on + strand, within ECD_03371 at 3536.754 kb on + strand, within ECD_03371 at 3536.754 kb on + strand, within ECD_03371 at 3536.754 kb on + strand, within ECD_03371 at 3536.755 kb on - strand, within ECD_03371 at 3536.755 kb on - strand, within ECD_03371 at 3536.755 kb on - strand, within ECD_03371 at 3536.755 kb on - strand, within ECD_03371 at 3536.755 kb on - strand, within ECD_03371 at 3536.756 kb on + strand, within ECD_03371 at 3536.767 kb on - strand, within ECD_03371 at 3536.781 kb on + strand, within ECD_03371 at 3536.781 kb on + strand, within ECD_03371 at 3536.782 kb on - strand, within ECD_03371 at 3536.786 kb on + strand, within ECD_03371 at 3536.786 kb on + strand, within ECD_03371 at 3536.786 kb on + strand, within ECD_03371 at 3536.786 kb on + strand, within ECD_03371 at 3536.787 kb on - strand, within ECD_03371 at 3536.787 kb on - strand, within ECD_03371 at 3536.795 kb on + strand, within ECD_03371 at 3536.868 kb on - strand, within ECD_03371 at 3536.938 kb on + strand, within ECD_03371 at 3536.938 kb on + strand, within ECD_03371 at 3537.132 kb on + strand, within ECD_03371 at 3537.133 kb on - strand, within ECD_03371 at 3537.140 kb on - strand, within ECD_03371 at 3537.140 kb on - strand, within ECD_03371 at 3537.171 kb on + strand at 3537.171 kb on + strand at 3537.172 kb on - strand at 3537.172 kb on - strand at 3537.172 kb on - strand at 3537.173 kb on + strand at 3537.174 kb on - strand at 3537.195 kb on - strand at 3537.195 kb on - strand at 3537.199 kb on - strand at 3537.220 kb on + strand at 3537.220 kb on + strand at 3537.222 kb on + strand at 3537.222 kb on + strand at 3537.222 kb on + strand at 3537.222 kb on + strand at 3537.223 kb on - strand at 3537.295 kb on - strand at 3537.295 kb on - strand at 3537.295 kb on - strand at 3537.297 kb on + strand at 3537.298 kb on - strand at 3537.327 kb on - strand at 3537.350 kb on + strand at 3537.350 kb on + strand at 3537.350 kb on + strand at 3537.351 kb on - strand at 3537.444 kb on + strand at 3537.445 kb on - strand at 3537.473 kb on + strand at 3537.474 kb on - strand at 3537.474 kb on - strand at 3537.762 kb on + strand, within ECD_03372 at 3537.763 kb on - strand, within ECD_03372 at 3537.871 kb on + strand, within ECD_03372 at 3537.871 kb on + strand, within ECD_03372 at 3537.887 kb on + strand, within ECD_03372 at 3537.887 kb on + strand, within ECD_03372 at 3537.887 kb on + strand, within ECD_03372 at 3537.887 kb on + strand, within ECD_03372 at 3537.888 kb on - strand, within ECD_03372 at 3538.000 kb on - strand, within ECD_03372 at 3538.012 kb on + strand, within ECD_03372 at 3538.149 kb on + strand, within ECD_03372 at 3538.149 kb on + strand, within ECD_03372 at 3538.150 kb on - strand, within ECD_03372 at 3538.224 kb on + strand, within ECD_03372 at 3538.224 kb on + strand, within ECD_03372 at 3538.224 kb on + strand, within ECD_03372 at 3538.224 kb on + strand, within ECD_03372 at 3538.225 kb on - strand, within ECD_03372 at 3538.225 kb on - strand, within ECD_03372 at 3538.225 kb on - strand, within ECD_03372 at 3538.230 kb on + strand, within ECD_03372
Per-strain Table
Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI remove 3,535,088 + ECD_03370 0.53 -3.7 3,535,188 + ECD_03370 0.63 +0.5 3,535,274 - ECD_03370 0.71 +0.9 3,535,274 - ECD_03370 0.71 -1.0 3,535,274 - ECD_03370 0.71 +1.5 3,535,274 - ECD_03370 0.71 +0.8 3,535,359 + ECD_03370 0.80 +1.9 3,535,393 + ECD_03370 0.83 +1.3 3,535,394 - ECD_03370 0.83 -1.3 3,535,394 - ECD_03370 0.83 -1.1 3,535,664 + -1.4 3,535,675 + +1.5 3,535,761 - -1.0 3,535,836 + -1.4 3,535,936 - +0.3 3,535,936 - +0.5 3,536,013 + -2.0 3,536,013 + -0.4 3,536,013 + -0.3 3,536,013 + -1.1 3,536,013 + -1.6 3,536,014 - -0.3 3,536,036 + -3.2 3,536,094 + +0.5 3,536,095 - -0.3 3,536,095 - +1.3 3,536,126 + ECD_03371 0.11 -2.1 3,536,127 - ECD_03371 0.12 -0.8 3,536,164 + ECD_03371 0.14 -0.7 3,536,389 + ECD_03371 0.31 -3.3 3,536,457 + ECD_03371 0.37 +0.7 3,536,458 - ECD_03371 0.37 -3.1 3,536,458 - ECD_03371 0.37 +0.1 3,536,579 + ECD_03371 0.46 -3.1 3,536,579 + ECD_03371 0.46 +0.7 3,536,613 + ECD_03371 0.48 +1.9 3,536,613 + ECD_03371 0.48 -1.0 3,536,614 - ECD_03371 0.48 +0.5 3,536,614 - ECD_03371 0.48 -1.4 3,536,614 - ECD_03371 0.48 +1.6 3,536,614 - ECD_03371 0.48 -1.1 3,536,614 - ECD_03371 0.48 +0.3 3,536,614 - ECD_03371 0.48 -2.1 3,536,614 - ECD_03371 0.48 -0.7 3,536,614 - ECD_03371 0.48 -0.6 3,536,741 + ECD_03371 0.58 +0.4 3,536,742 - ECD_03371 0.58 -3.0 3,536,742 - ECD_03371 0.58 +2.9 3,536,754 + ECD_03371 0.59 +0.8 3,536,754 + ECD_03371 0.59 +0.1 3,536,754 + ECD_03371 0.59 -0.3 3,536,754 + ECD_03371 0.59 +0.0 3,536,754 + ECD_03371 0.59 +0.4 3,536,754 + ECD_03371 0.59 +0.8 3,536,755 - ECD_03371 0.59 +1.4 3,536,755 - ECD_03371 0.59 -1.6 3,536,755 - ECD_03371 0.59 +1.8 3,536,755 - ECD_03371 0.59 -0.3 3,536,755 - ECD_03371 0.59 -2.2 3,536,756 + ECD_03371 0.59 +0.7 3,536,767 - ECD_03371 0.60 +0.3 3,536,781 + ECD_03371 0.61 +0.2 3,536,781 + ECD_03371 0.61 -1.0 3,536,782 - ECD_03371 0.61 -1.9 3,536,786 + ECD_03371 0.61 +0.7 3,536,786 + ECD_03371 0.61 -0.5 3,536,786 + ECD_03371 0.61 -0.4 3,536,786 + ECD_03371 0.61 +2.1 3,536,787 - ECD_03371 0.61 -2.8 3,536,787 - ECD_03371 0.61 -0.9 3,536,795 + ECD_03371 0.62 -0.9 3,536,868 - ECD_03371 0.68 +0.8 3,536,938 + ECD_03371 0.73 -4.0 3,536,938 + ECD_03371 0.73 +1.5 3,537,132 + ECD_03371 0.88 +1.4 3,537,133 - ECD_03371 0.88 +0.2 3,537,140 - ECD_03371 0.88 +0.2 3,537,140 - ECD_03371 0.88 +1.3 3,537,171 + +1.2 3,537,171 + -0.5 3,537,172 - +0.4 3,537,172 - +1.9 3,537,172 - +1.7 3,537,173 + -4.5 3,537,174 - -1.1 3,537,195 - -1.6 3,537,195 - +2.0 3,537,199 - +1.1 3,537,220 + +0.4 3,537,220 + +0.5 3,537,222 + -2.7 3,537,222 + -0.4 3,537,222 + +1.0 3,537,222 + -1.5 3,537,223 - +0.4 3,537,295 - +0.7 3,537,295 - -1.4 3,537,295 - -1.3 3,537,297 + -2.5 3,537,298 - -0.2 3,537,327 - -0.8 3,537,350 + +1.0 3,537,350 + -0.0 3,537,350 + +0.6 3,537,351 - +0.2 3,537,444 + -1.5 3,537,445 - -1.7 3,537,473 + +0.5 3,537,474 - +0.4 3,537,474 - -2.3 3,537,762 + ECD_03372 0.14 -1.3 3,537,763 - ECD_03372 0.14 +1.1 3,537,871 + ECD_03372 0.19 -1.7 3,537,871 + ECD_03372 0.19 -1.5 3,537,887 + ECD_03372 0.20 -1.6 3,537,887 + ECD_03372 0.20 +2.4 3,537,887 + ECD_03372 0.20 -0.4 3,537,887 + ECD_03372 0.20 -2.2 3,537,888 - ECD_03372 0.20 -1.9 3,538,000 - ECD_03372 0.25 -2.7 3,538,012 + ECD_03372 0.26 -3.4 3,538,149 + ECD_03372 0.33 +0.2 3,538,149 + ECD_03372 0.33 -1.2 3,538,150 - ECD_03372 0.33 -0.8 3,538,224 + ECD_03372 0.36 +2.8 3,538,224 + ECD_03372 0.36 +1.3 3,538,224 + ECD_03372 0.36 -1.2 3,538,224 + ECD_03372 0.36 +1.1 3,538,225 - ECD_03372 0.36 -0.6 3,538,225 - ECD_03372 0.36 +2.7 3,538,225 - ECD_03372 0.36 +0.9 3,538,230 + ECD_03372 0.36 +0.1
Or see this region's nucleotide sequence