Strain Fitness in Escherichia coli BL21 around ECD_03286

Experiment: P2_phage_0.5625_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03285 and ECD_03286 are separated by 191 nucleotidesECD_03286 and ECD_03287 are separated by 56 nucleotides ECD_03285: ECD_03285 - aspartate-semialdehyde dehydrogenase, NAD(P)-binding, at 3,436,925 to 3,438,028 _03285 ECD_03286: ECD_03286 - UPF0056 family inner membrane protein, at 3,438,220 to 3,438,813 _03286 ECD_03287: ECD_03287 - gluconate transporter, low affinity GNT 1 system, at 3,438,870 to 3,440,210 _03287 Position (kb) 3438 3439Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 3438.059 kb on + strandat 3438.060 kb on - strandat 3438.060 kb on - strandat 3438.060 kb on - strandat 3438.062 kb on - strandat 3438.062 kb on - strandat 3438.062 kb on - strandat 3438.164 kb on + strandat 3438.177 kb on + strandat 3438.178 kb on - strandat 3438.202 kb on + strandat 3438.203 kb on - strandat 3438.220 kb on - strandat 3438.220 kb on - strandat 3438.248 kb on + strandat 3438.281 kb on + strand, within ECD_03286at 3438.285 kb on + strand, within ECD_03286at 3438.285 kb on + strand, within ECD_03286at 3438.286 kb on - strand, within ECD_03286at 3438.309 kb on + strand, within ECD_03286at 3438.310 kb on - strand, within ECD_03286at 3438.310 kb on - strand, within ECD_03286at 3438.354 kb on + strand, within ECD_03286at 3438.420 kb on - strand, within ECD_03286at 3438.420 kb on - strand, within ECD_03286at 3438.504 kb on + strand, within ECD_03286at 3438.576 kb on + strand, within ECD_03286at 3438.577 kb on - strand, within ECD_03286at 3438.681 kb on - strand, within ECD_03286at 3438.698 kb on + strand, within ECD_03286at 3438.871 kb on + strandat 3438.871 kb on + strandat 3439.237 kb on - strand, within ECD_03287at 3439.375 kb on + strand, within ECD_03287at 3439.376 kb on - strand, within ECD_03287at 3439.376 kb on - strand, within ECD_03287at 3439.425 kb on - strand, within ECD_03287at 3439.449 kb on - strand, within ECD_03287at 3439.600 kb on + strand, within ECD_03287at 3439.617 kb on - strand, within ECD_03287at 3439.617 kb on - strand, within ECD_03287

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Per-strain Table

Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI
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3,438,059 + -0.6
3,438,060 - -0.9
3,438,060 - +0.9
3,438,060 - -0.3
3,438,062 - +1.9
3,438,062 - +2.2
3,438,062 - +0.1
3,438,164 + +0.6
3,438,177 + -2.7
3,438,178 - -1.3
3,438,202 + +1.0
3,438,203 - +1.0
3,438,220 - +2.4
3,438,220 - -0.4
3,438,248 + -1.9
3,438,281 + ECD_03286 0.10 +1.5
3,438,285 + ECD_03286 0.11 +0.6
3,438,285 + ECD_03286 0.11 +2.7
3,438,286 - ECD_03286 0.11 +3.6
3,438,309 + ECD_03286 0.15 +0.4
3,438,310 - ECD_03286 0.15 +0.8
3,438,310 - ECD_03286 0.15 -4.6
3,438,354 + ECD_03286 0.23 -0.5
3,438,420 - ECD_03286 0.34 -0.5
3,438,420 - ECD_03286 0.34 -1.0
3,438,504 + ECD_03286 0.48 +2.2
3,438,576 + ECD_03286 0.60 +1.2
3,438,577 - ECD_03286 0.60 -0.3
3,438,681 - ECD_03286 0.78 -1.9
3,438,698 + ECD_03286 0.80 +0.8
3,438,871 + +0.8
3,438,871 + +0.4
3,439,237 - ECD_03287 0.27 -0.3
3,439,375 + ECD_03287 0.38 +0.5
3,439,376 - ECD_03287 0.38 -2.6
3,439,376 - ECD_03287 0.38 +0.1
3,439,425 - ECD_03287 0.41 +0.5
3,439,449 - ECD_03287 0.43 +1.6
3,439,600 + ECD_03287 0.54 -4.5
3,439,617 - ECD_03287 0.56 -0.8
3,439,617 - ECD_03287 0.56 +0.2

Or see this region's nucleotide sequence