Strain Fitness in Escherichia coli BL21 around ECD_03207

Experiment: P2_phage_0.5625_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03205 and ECD_03206 are separated by 53 nucleotidesECD_03206 and ECD_03207 are separated by 54 nucleotidesECD_03207 and ECD_03208 are separated by 301 nucleotidesECD_03208 and ECD_03209 are separated by 38 nucleotides ECD_03205: ECD_03205 - UPF0270 family protein, at 3,343,819 to 3,344,037 _03205 ECD_03206: ECD_03206 - putative phosphoribulokinase, at 3,344,091 to 3,344,960 _03206 ECD_03207: ECD_03207 - OsmC family protein, at 3,345,015 to 3,345,419 _03207 ECD_03208: ECD_03208 - cAMP-activated global transcription factor, mediator of catabolite repression, at 3,345,721 to 3,346,353 _03208 ECD_03209: ECD_03209 - putative transporter, FUSC superfamily inner membrane protein, at 3,346,392 to 3,348,494 _03209 Position (kb) 3345 3346Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3344.061 kb on + strandat 3344.062 kb on - strandat 3344.070 kb on + strandat 3344.074 kb on + strandat 3344.074 kb on + strandat 3344.074 kb on + strandat 3344.088 kb on - strandat 3344.090 kb on + strandat 3344.091 kb on - strandat 3344.091 kb on - strandat 3344.174 kb on - strandat 3344.229 kb on + strand, within ECD_03206at 3344.285 kb on + strand, within ECD_03206at 3344.286 kb on - strand, within ECD_03206at 3344.379 kb on + strand, within ECD_03206at 3344.387 kb on + strand, within ECD_03206at 3344.387 kb on + strand, within ECD_03206at 3344.388 kb on - strand, within ECD_03206at 3344.388 kb on - strand, within ECD_03206at 3344.391 kb on + strand, within ECD_03206at 3344.467 kb on + strand, within ECD_03206at 3344.467 kb on + strand, within ECD_03206at 3344.476 kb on - strand, within ECD_03206at 3344.485 kb on + strand, within ECD_03206at 3344.513 kb on + strand, within ECD_03206at 3344.513 kb on + strand, within ECD_03206at 3344.513 kb on + strand, within ECD_03206at 3344.536 kb on + strand, within ECD_03206at 3344.537 kb on - strand, within ECD_03206at 3344.639 kb on - strand, within ECD_03206at 3344.658 kb on + strand, within ECD_03206at 3344.659 kb on - strand, within ECD_03206at 3344.659 kb on - strand, within ECD_03206at 3344.659 kb on - strand, within ECD_03206at 3344.659 kb on - strand, within ECD_03206at 3344.659 kb on - strand, within ECD_03206at 3344.659 kb on - strand, within ECD_03206at 3344.660 kb on + strand, within ECD_03206at 3344.660 kb on + strand, within ECD_03206at 3344.660 kb on + strand, within ECD_03206at 3344.661 kb on - strand, within ECD_03206at 3344.667 kb on + strand, within ECD_03206at 3344.667 kb on + strand, within ECD_03206at 3344.668 kb on - strand, within ECD_03206at 3344.753 kb on + strand, within ECD_03206at 3344.864 kb on + strand, within ECD_03206at 3344.864 kb on + strand, within ECD_03206at 3344.864 kb on + strand, within ECD_03206at 3344.864 kb on + strand, within ECD_03206at 3344.865 kb on - strand, within ECD_03206at 3344.865 kb on - strand, within ECD_03206at 3344.865 kb on - strand, within ECD_03206at 3344.865 kb on - strand, within ECD_03206at 3344.869 kb on + strand, within ECD_03206at 3344.869 kb on + strand, within ECD_03206at 3344.875 kb on + strandat 3344.908 kb on + strandat 3344.909 kb on - strandat 3344.909 kb on - strandat 3344.913 kb on - strandat 3344.958 kb on + strandat 3344.959 kb on - strandat 3345.011 kb on + strandat 3345.011 kb on + strandat 3345.011 kb on + strandat 3345.012 kb on - strandat 3345.012 kb on - strandat 3345.085 kb on + strand, within ECD_03207at 3345.164 kb on + strand, within ECD_03207at 3345.456 kb on + strandat 3345.462 kb on + strandat 3345.462 kb on + strandat 3345.463 kb on - strandat 3345.463 kb on - strandat 3345.542 kb on + strandat 3345.542 kb on + strandat 3345.559 kb on + strandat 3345.559 kb on + strandat 3345.564 kb on + strandat 3345.567 kb on + strandat 3345.567 kb on + strandat 3345.567 kb on + strandat 3345.577 kb on + strandat 3345.577 kb on + strandat 3345.577 kb on + strandat 3345.577 kb on + strandat 3345.577 kb on + strandat 3345.577 kb on + strandat 3345.586 kb on + strandat 3345.586 kb on + strandat 3345.586 kb on + strandat 3345.586 kb on + strandat 3345.586 kb on + strandat 3345.586 kb on + strandat 3345.586 kb on + strandat 3345.586 kb on + strandat 3345.615 kb on + strandat 3345.702 kb on + strandat 3345.702 kb on + strandat 3345.702 kb on + strandat 3346.374 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI
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3,344,061 + +0.9
3,344,062 - -1.0
3,344,070 + -1.2
3,344,074 + -0.2
3,344,074 + -0.2
3,344,074 + -0.4
3,344,088 - -1.6
3,344,090 + +1.2
3,344,091 - +0.3
3,344,091 - +0.6
3,344,174 - +1.0
3,344,229 + ECD_03206 0.16 +0.5
3,344,285 + ECD_03206 0.22 -0.3
3,344,286 - ECD_03206 0.22 +1.4
3,344,379 + ECD_03206 0.33 -2.5
3,344,387 + ECD_03206 0.34 -1.4
3,344,387 + ECD_03206 0.34 +2.1
3,344,388 - ECD_03206 0.34 -0.6
3,344,388 - ECD_03206 0.34 +1.7
3,344,391 + ECD_03206 0.34 -1.8
3,344,467 + ECD_03206 0.43 +0.1
3,344,467 + ECD_03206 0.43 -1.1
3,344,476 - ECD_03206 0.44 +0.2
3,344,485 + ECD_03206 0.45 -1.6
3,344,513 + ECD_03206 0.49 -0.5
3,344,513 + ECD_03206 0.49 +1.1
3,344,513 + ECD_03206 0.49 -0.5
3,344,536 + ECD_03206 0.51 +0.3
3,344,537 - ECD_03206 0.51 +2.9
3,344,639 - ECD_03206 0.63 +0.4
3,344,658 + ECD_03206 0.65 +1.0
3,344,659 - ECD_03206 0.65 +0.7
3,344,659 - ECD_03206 0.65 -2.9
3,344,659 - ECD_03206 0.65 +0.8
3,344,659 - ECD_03206 0.65 -0.6
3,344,659 - ECD_03206 0.65 -2.3
3,344,659 - ECD_03206 0.65 -2.8
3,344,660 + ECD_03206 0.65 -2.8
3,344,660 + ECD_03206 0.65 +0.0
3,344,660 + ECD_03206 0.65 -2.0
3,344,661 - ECD_03206 0.66 -0.2
3,344,667 + ECD_03206 0.66 -1.4
3,344,667 + ECD_03206 0.66 -2.6
3,344,668 - ECD_03206 0.66 +0.7
3,344,753 + ECD_03206 0.76 +0.6
3,344,864 + ECD_03206 0.89 -2.3
3,344,864 + ECD_03206 0.89 +0.4
3,344,864 + ECD_03206 0.89 -2.7
3,344,864 + ECD_03206 0.89 +2.0
3,344,865 - ECD_03206 0.89 -1.3
3,344,865 - ECD_03206 0.89 -0.3
3,344,865 - ECD_03206 0.89 -0.5
3,344,865 - ECD_03206 0.89 +1.0
3,344,869 + ECD_03206 0.89 +1.1
3,344,869 + ECD_03206 0.89 +2.5
3,344,875 + +1.8
3,344,908 + +2.2
3,344,909 - +1.6
3,344,909 - +0.2
3,344,913 - -1.5
3,344,958 + +1.9
3,344,959 - -1.3
3,345,011 + -2.3
3,345,011 + +1.9
3,345,011 + -0.5
3,345,012 - +0.4
3,345,012 - -1.3
3,345,085 + ECD_03207 0.17 -1.4
3,345,164 + ECD_03207 0.37 -1.3
3,345,456 + -1.6
3,345,462 + +0.5
3,345,462 + +0.0
3,345,463 - -0.1
3,345,463 - +1.0
3,345,542 + -0.4
3,345,542 + +1.0
3,345,559 + -1.8
3,345,559 + +0.2
3,345,564 + +0.3
3,345,567 + +2.9
3,345,567 + +0.5
3,345,567 + -1.0
3,345,577 + +0.3
3,345,577 + +0.5
3,345,577 + +0.3
3,345,577 + +0.4
3,345,577 + +1.4
3,345,577 + +0.5
3,345,586 + +0.3
3,345,586 + +1.0
3,345,586 + -0.4
3,345,586 + -0.7
3,345,586 + -1.2
3,345,586 + +2.0
3,345,586 + -0.2
3,345,586 + +2.1
3,345,615 + -2.4
3,345,702 + +1.6
3,345,702 + +1.0
3,345,702 + +1.1
3,346,374 - -1.1

Or see this region's nucleotide sequence