Strain Fitness in Escherichia coli BL21 around ECD_03124

Experiment: P2_phage_0.5625_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03123 and ECD_03124 are separated by 11 nucleotidesECD_03124 and ECD_03125 are separated by 252 nucleotides ECD_03123: ECD_03123 - cytoplasmic membrane lipoprotein, at 3,275,020 to 3,276,177 _03123 ECD_03124: ECD_03124 - multidrug efflux system protein, at 3,276,189 to 3,279,293 _03124 ECD_03125: ECD_03125 - putative outer membrane protein, at 3,279,546 to 3,279,767 _03125 Position (kb) 3276 3277 3278 3279 3280Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 3275.208 kb on + strand, within ECD_03123at 3275.243 kb on + strand, within ECD_03123at 3275.253 kb on + strand, within ECD_03123at 3275.254 kb on - strand, within ECD_03123at 3275.276 kb on + strand, within ECD_03123at 3275.276 kb on + strand, within ECD_03123at 3275.276 kb on + strand, within ECD_03123at 3275.277 kb on - strand, within ECD_03123at 3275.277 kb on - strand, within ECD_03123at 3275.329 kb on + strand, within ECD_03123at 3275.330 kb on - strand, within ECD_03123at 3275.330 kb on - strand, within ECD_03123at 3275.425 kb on + strand, within ECD_03123at 3275.426 kb on - strand, within ECD_03123at 3275.426 kb on - strand, within ECD_03123at 3275.426 kb on - strand, within ECD_03123at 3275.533 kb on + strand, within ECD_03123at 3275.536 kb on - strand, within ECD_03123at 3275.605 kb on - strand, within ECD_03123at 3275.649 kb on + strand, within ECD_03123at 3275.650 kb on - strand, within ECD_03123at 3275.650 kb on - strand, within ECD_03123at 3275.650 kb on - strand, within ECD_03123at 3275.650 kb on - strand, within ECD_03123at 3275.653 kb on + strand, within ECD_03123at 3275.653 kb on + strand, within ECD_03123at 3275.653 kb on + strand, within ECD_03123at 3275.653 kb on + strand, within ECD_03123at 3275.653 kb on + strand, within ECD_03123at 3275.654 kb on - strand, within ECD_03123at 3275.654 kb on - strand, within ECD_03123at 3275.654 kb on - strand, within ECD_03123at 3275.654 kb on - strand, within ECD_03123at 3275.654 kb on - strand, within ECD_03123at 3275.747 kb on + strand, within ECD_03123at 3275.748 kb on - strand, within ECD_03123at 3275.790 kb on + strand, within ECD_03123at 3275.791 kb on - strand, within ECD_03123at 3275.843 kb on + strand, within ECD_03123at 3275.843 kb on + strand, within ECD_03123at 3275.843 kb on + strand, within ECD_03123at 3275.843 kb on + strand, within ECD_03123at 3275.844 kb on - strand, within ECD_03123at 3275.844 kb on - strand, within ECD_03123at 3275.871 kb on + strand, within ECD_03123at 3275.871 kb on + strand, within ECD_03123at 3275.872 kb on - strand, within ECD_03123at 3276.162 kb on + strandat 3276.176 kb on - strandat 3276.180 kb on + strandat 3276.181 kb on - strandat 3276.181 kb on - strandat 3276.240 kb on - strandat 3276.272 kb on - strandat 3276.334 kb on - strandat 3276.417 kb on + strandat 3276.417 kb on + strandat 3276.417 kb on + strandat 3276.417 kb on + strandat 3276.417 kb on + strandat 3276.417 kb on + strandat 3276.417 kb on + strandat 3276.417 kb on + strandat 3276.417 kb on + strandat 3276.419 kb on + strandat 3276.419 kb on + strandat 3276.419 kb on + strandat 3276.419 kb on + strandat 3276.419 kb on + strandat 3276.420 kb on - strandat 3276.420 kb on - strandat 3276.420 kb on - strandat 3276.420 kb on - strandat 3276.420 kb on - strandat 3276.420 kb on - strandat 3276.420 kb on - strandat 3276.420 kb on - strandat 3276.458 kb on + strandat 3276.458 kb on + strandat 3276.458 kb on + strandat 3276.595 kb on - strand, within ECD_03124at 3276.595 kb on - strand, within ECD_03124at 3276.658 kb on - strand, within ECD_03124at 3276.658 kb on - strand, within ECD_03124at 3276.681 kb on - strand, within ECD_03124at 3276.681 kb on - strand, within ECD_03124at 3276.712 kb on + strand, within ECD_03124at 3276.713 kb on - strand, within ECD_03124at 3276.732 kb on + strand, within ECD_03124at 3276.733 kb on - strand, within ECD_03124at 3276.815 kb on - strand, within ECD_03124at 3277.013 kb on + strand, within ECD_03124at 3277.168 kb on - strand, within ECD_03124at 3277.168 kb on - strand, within ECD_03124at 3277.196 kb on + strand, within ECD_03124at 3277.233 kb on - strand, within ECD_03124at 3277.233 kb on - strand, within ECD_03124at 3277.254 kb on + strand, within ECD_03124at 3277.254 kb on + strand, within ECD_03124at 3277.255 kb on - strand, within ECD_03124at 3277.255 kb on - strand, within ECD_03124at 3277.318 kb on + strand, within ECD_03124at 3277.544 kb on - strand, within ECD_03124at 3277.601 kb on + strand, within ECD_03124at 3277.663 kb on + strand, within ECD_03124at 3277.664 kb on - strand, within ECD_03124at 3277.733 kb on + strand, within ECD_03124at 3277.736 kb on + strand, within ECD_03124at 3277.751 kb on + strand, within ECD_03124at 3277.765 kb on - strand, within ECD_03124at 3277.765 kb on - strand, within ECD_03124at 3277.806 kb on + strand, within ECD_03124at 3277.810 kb on + strand, within ECD_03124at 3277.811 kb on - strand, within ECD_03124at 3277.818 kb on + strand, within ECD_03124at 3277.818 kb on + strand, within ECD_03124at 3277.818 kb on + strand, within ECD_03124at 3277.819 kb on - strand, within ECD_03124at 3277.877 kb on - strand, within ECD_03124at 3277.974 kb on + strand, within ECD_03124at 3277.974 kb on + strand, within ECD_03124at 3277.977 kb on + strand, within ECD_03124at 3278.030 kb on + strand, within ECD_03124at 3278.030 kb on + strand, within ECD_03124at 3278.323 kb on + strand, within ECD_03124at 3278.339 kb on + strand, within ECD_03124at 3278.340 kb on - strand, within ECD_03124at 3278.366 kb on + strand, within ECD_03124at 3278.402 kb on - strand, within ECD_03124at 3278.457 kb on + strand, within ECD_03124at 3278.457 kb on + strand, within ECD_03124at 3278.457 kb on + strand, within ECD_03124at 3278.457 kb on + strand, within ECD_03124at 3278.457 kb on + strand, within ECD_03124at 3278.458 kb on - strand, within ECD_03124at 3278.458 kb on - strand, within ECD_03124at 3278.499 kb on + strand, within ECD_03124at 3278.499 kb on + strand, within ECD_03124at 3278.499 kb on + strand, within ECD_03124at 3278.499 kb on + strand, within ECD_03124at 3278.499 kb on + strand, within ECD_03124at 3278.499 kb on + strand, within ECD_03124at 3278.500 kb on - strand, within ECD_03124at 3278.525 kb on + strand, within ECD_03124at 3278.553 kb on + strand, within ECD_03124at 3278.616 kb on + strand, within ECD_03124at 3278.616 kb on + strand, within ECD_03124at 3278.616 kb on + strand, within ECD_03124at 3278.616 kb on + strand, within ECD_03124at 3278.617 kb on - strand, within ECD_03124at 3278.617 kb on - strand, within ECD_03124at 3278.617 kb on - strand, within ECD_03124at 3278.768 kb on + strand, within ECD_03124at 3278.859 kb on + strand, within ECD_03124at 3278.860 kb on - strand, within ECD_03124at 3278.888 kb on + strand, within ECD_03124at 3278.961 kb on + strand, within ECD_03124at 3278.962 kb on - strand, within ECD_03124at 3278.962 kb on - strand, within ECD_03124at 3279.088 kb on + strandat 3279.088 kb on + strandat 3279.089 kb on - strandat 3279.089 kb on - strandat 3279.089 kb on - strandat 3279.092 kb on + strandat 3279.092 kb on + strandat 3279.092 kb on + strandat 3279.092 kb on + strandat 3279.092 kb on + strandat 3279.093 kb on - strandat 3279.093 kb on - strandat 3279.093 kb on - strandat 3279.093 kb on - strandat 3279.131 kb on + strandat 3279.156 kb on - strandat 3279.497 kb on + strandat 3279.506 kb on + strandat 3279.663 kb on - strand, within ECD_03125at 3279.811 kb on - strandat 3279.817 kb on - strandat 3279.821 kb on - strandat 3279.850 kb on + strandat 3279.866 kb on + strandat 3280.142 kb on + strandat 3280.165 kb on + strandat 3280.168 kb on - strandat 3280.197 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI
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3,275,208 + ECD_03123 0.16 -1.3
3,275,243 + ECD_03123 0.19 +1.0
3,275,253 + ECD_03123 0.20 -0.1
3,275,254 - ECD_03123 0.20 -2.0
3,275,276 + ECD_03123 0.22 -0.5
3,275,276 + ECD_03123 0.22 +1.4
3,275,276 + ECD_03123 0.22 -0.4
3,275,277 - ECD_03123 0.22 -1.3
3,275,277 - ECD_03123 0.22 -1.8
3,275,329 + ECD_03123 0.27 +0.5
3,275,330 - ECD_03123 0.27 -1.9
3,275,330 - ECD_03123 0.27 -1.1
3,275,425 + ECD_03123 0.35 -1.3
3,275,426 - ECD_03123 0.35 +2.7
3,275,426 - ECD_03123 0.35 +0.1
3,275,426 - ECD_03123 0.35 -0.7
3,275,533 + ECD_03123 0.44 +1.4
3,275,536 - ECD_03123 0.45 -2.3
3,275,605 - ECD_03123 0.51 +1.7
3,275,649 + ECD_03123 0.54 -2.5
3,275,650 - ECD_03123 0.54 +2.1
3,275,650 - ECD_03123 0.54 -0.6
3,275,650 - ECD_03123 0.54 -2.5
3,275,650 - ECD_03123 0.54 +0.0
3,275,653 + ECD_03123 0.55 +0.4
3,275,653 + ECD_03123 0.55 -1.7
3,275,653 + ECD_03123 0.55 -2.4
3,275,653 + ECD_03123 0.55 -0.8
3,275,653 + ECD_03123 0.55 -0.2
3,275,654 - ECD_03123 0.55 +1.0
3,275,654 - ECD_03123 0.55 -1.2
3,275,654 - ECD_03123 0.55 -1.7
3,275,654 - ECD_03123 0.55 -0.3
3,275,654 - ECD_03123 0.55 -0.1
3,275,747 + ECD_03123 0.63 -3.0
3,275,748 - ECD_03123 0.63 +0.8
3,275,790 + ECD_03123 0.66 +0.7
3,275,791 - ECD_03123 0.67 -1.9
3,275,843 + ECD_03123 0.71 -3.6
3,275,843 + ECD_03123 0.71 -2.3
3,275,843 + ECD_03123 0.71 -0.7
3,275,843 + ECD_03123 0.71 +0.4
3,275,844 - ECD_03123 0.71 -0.0
3,275,844 - ECD_03123 0.71 +1.4
3,275,871 + ECD_03123 0.73 +0.7
3,275,871 + ECD_03123 0.73 -1.8
3,275,872 - ECD_03123 0.74 -0.4
3,276,162 + -2.7
3,276,176 - -1.1
3,276,180 + +0.1
3,276,181 - +0.8
3,276,181 - -0.2
3,276,240 - -2.6
3,276,272 - -1.6
3,276,334 - -0.3
3,276,417 + +2.2
3,276,417 + +3.6
3,276,417 + -1.6
3,276,417 + +0.7
3,276,417 + +2.1
3,276,417 + +0.9
3,276,417 + -2.0
3,276,417 + -2.4
3,276,417 + -0.3
3,276,419 + +0.4
3,276,419 + -0.9
3,276,419 + -0.3
3,276,419 + -0.5
3,276,419 + +3.9
3,276,420 - -0.4
3,276,420 - -1.1
3,276,420 - -3.4
3,276,420 - -1.3
3,276,420 - +1.6
3,276,420 - -1.1
3,276,420 - +0.8
3,276,420 - -0.5
3,276,458 + +0.2
3,276,458 + -1.4
3,276,458 + -2.2
3,276,595 - ECD_03124 0.13 -2.2
3,276,595 - ECD_03124 0.13 -0.8
3,276,658 - ECD_03124 0.15 -2.8
3,276,658 - ECD_03124 0.15 +0.7
3,276,681 - ECD_03124 0.16 -2.5
3,276,681 - ECD_03124 0.16 -0.1
3,276,712 + ECD_03124 0.17 -0.9
3,276,713 - ECD_03124 0.17 -1.8
3,276,732 + ECD_03124 0.17 -2.0
3,276,733 - ECD_03124 0.18 +0.8
3,276,815 - ECD_03124 0.20 -0.2
3,277,013 + ECD_03124 0.27 +2.0
3,277,168 - ECD_03124 0.32 +0.4
3,277,168 - ECD_03124 0.32 +1.1
3,277,196 + ECD_03124 0.32 +0.7
3,277,233 - ECD_03124 0.34 -0.9
3,277,233 - ECD_03124 0.34 -1.4
3,277,254 + ECD_03124 0.34 -3.6
3,277,254 + ECD_03124 0.34 -2.7
3,277,255 - ECD_03124 0.34 +1.9
3,277,255 - ECD_03124 0.34 +0.0
3,277,318 + ECD_03124 0.36 -2.7
3,277,544 - ECD_03124 0.44 -3.0
3,277,601 + ECD_03124 0.45 -1.6
3,277,663 + ECD_03124 0.47 -2.0
3,277,664 - ECD_03124 0.48 +0.7
3,277,733 + ECD_03124 0.50 -3.4
3,277,736 + ECD_03124 0.50 -1.0
3,277,751 + ECD_03124 0.50 -1.8
3,277,765 - ECD_03124 0.51 +1.2
3,277,765 - ECD_03124 0.51 -1.4
3,277,806 + ECD_03124 0.52 -0.3
3,277,810 + ECD_03124 0.52 -2.1
3,277,811 - ECD_03124 0.52 -4.7
3,277,818 + ECD_03124 0.52 -0.8
3,277,818 + ECD_03124 0.52 +1.2
3,277,818 + ECD_03124 0.52 +0.0
3,277,819 - ECD_03124 0.52 -0.1
3,277,877 - ECD_03124 0.54 +0.6
3,277,974 + ECD_03124 0.57 -1.8
3,277,974 + ECD_03124 0.57 -1.7
3,277,977 + ECD_03124 0.58 +0.9
3,278,030 + ECD_03124 0.59 +0.4
3,278,030 + ECD_03124 0.59 -0.1
3,278,323 + ECD_03124 0.69 -3.1
3,278,339 + ECD_03124 0.69 +0.8
3,278,340 - ECD_03124 0.69 -1.3
3,278,366 + ECD_03124 0.70 -2.2
3,278,402 - ECD_03124 0.71 +0.5
3,278,457 + ECD_03124 0.73 +2.1
3,278,457 + ECD_03124 0.73 -1.7
3,278,457 + ECD_03124 0.73 -1.5
3,278,457 + ECD_03124 0.73 +1.7
3,278,457 + ECD_03124 0.73 -1.4
3,278,458 - ECD_03124 0.73 -1.2
3,278,458 - ECD_03124 0.73 +3.6
3,278,499 + ECD_03124 0.74 -0.1
3,278,499 + ECD_03124 0.74 -0.5
3,278,499 + ECD_03124 0.74 -0.2
3,278,499 + ECD_03124 0.74 -1.0
3,278,499 + ECD_03124 0.74 -2.6
3,278,499 + ECD_03124 0.74 -1.1
3,278,500 - ECD_03124 0.74 -1.5
3,278,525 + ECD_03124 0.75 +2.1
3,278,553 + ECD_03124 0.76 +0.5
3,278,616 + ECD_03124 0.78 +1.3
3,278,616 + ECD_03124 0.78 -1.8
3,278,616 + ECD_03124 0.78 +2.7
3,278,616 + ECD_03124 0.78 +1.1
3,278,617 - ECD_03124 0.78 -0.1
3,278,617 - ECD_03124 0.78 -0.6
3,278,617 - ECD_03124 0.78 -3.9
3,278,768 + ECD_03124 0.83 -3.2
3,278,859 + ECD_03124 0.86 -2.0
3,278,860 - ECD_03124 0.86 +1.8
3,278,888 + ECD_03124 0.87 -1.2
3,278,961 + ECD_03124 0.89 +0.1
3,278,962 - ECD_03124 0.89 -1.7
3,278,962 - ECD_03124 0.89 -3.2
3,279,088 + +2.1
3,279,088 + -2.1
3,279,089 - +1.9
3,279,089 - -0.5
3,279,089 - -2.3
3,279,092 + -2.7
3,279,092 + -1.0
3,279,092 + -2.8
3,279,092 + +0.0
3,279,092 + +0.7
3,279,093 - +1.0
3,279,093 - +0.4
3,279,093 - -2.6
3,279,093 - -0.9
3,279,131 + +0.5
3,279,156 - -1.9
3,279,497 + +1.5
3,279,506 + -0.7
3,279,663 - ECD_03125 0.53 +0.2
3,279,811 - -2.9
3,279,817 - -2.3
3,279,821 - +0.6
3,279,850 + +1.2
3,279,866 + +1.0
3,280,142 + -2.2
3,280,165 + +2.9
3,280,168 - -3.1
3,280,197 + +1.7

Or see this region's nucleotide sequence