Strain Fitness in Escherichia coli BL21 around ECD_02946

Experiment: P2_phage_0.5625_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02945 and ECD_02946 overlap by 4 nucleotidesECD_02946 and ECD_02947 are separated by 62 nucleotides ECD_02945: ECD_02945 - evolved beta-D-galactosidase, alpha subunit, at 3,088,715 to 3,091,807 _02945 ECD_02946: ECD_02946 - evolved beta-D-galactosidase, beta subunit; cupin superfamily, at 3,091,804 to 3,092,253 _02946 ECD_02947: ECD_02947 - putative transporter, at 3,092,316 to 3,093,749 _02947 Position (kb) 3091 3092 3093Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 3090.850 kb on + strand, within ECD_02945at 3090.850 kb on + strand, within ECD_02945at 3091.101 kb on + strand, within ECD_02945at 3091.184 kb on + strand, within ECD_02945at 3091.184 kb on + strand, within ECD_02945at 3091.184 kb on + strand, within ECD_02945at 3091.185 kb on - strand, within ECD_02945at 3091.185 kb on - strand, within ECD_02945at 3091.185 kb on - strand, within ECD_02945at 3091.320 kb on - strand, within ECD_02945at 3091.320 kb on - strand, within ECD_02945at 3091.343 kb on + strand, within ECD_02945at 3091.375 kb on + strand, within ECD_02945at 3091.412 kb on + strand, within ECD_02945at 3091.413 kb on - strand, within ECD_02945at 3091.435 kb on + strand, within ECD_02945at 3091.513 kb on + strandat 3091.532 kb on + strandat 3091.532 kb on + strandat 3091.532 kb on + strandat 3091.533 kb on - strandat 3091.533 kb on - strandat 3091.533 kb on - strandat 3091.534 kb on + strandat 3091.568 kb on - strandat 3091.692 kb on - strandat 3091.692 kb on - strandat 3091.699 kb on + strandat 3091.700 kb on - strandat 3091.751 kb on + strandat 3091.752 kb on - strandat 3091.823 kb on + strandat 3091.823 kb on + strandat 3091.824 kb on - strandat 3091.824 kb on - strandat 3091.824 kb on - strandat 3091.843 kb on + strandat 3091.943 kb on - strand, within ECD_02946at 3092.011 kb on + strand, within ECD_02946at 3092.337 kb on - strandat 3092.337 kb on - strandat 3092.468 kb on + strand, within ECD_02947at 3092.573 kb on + strand, within ECD_02947at 3092.577 kb on - strand, within ECD_02947at 3092.585 kb on + strand, within ECD_02947at 3092.589 kb on + strand, within ECD_02947at 3092.673 kb on + strand, within ECD_02947at 3092.673 kb on + strand, within ECD_02947at 3092.674 kb on - strand, within ECD_02947at 3092.675 kb on + strand, within ECD_02947at 3092.675 kb on + strand, within ECD_02947at 3092.708 kb on + strand, within ECD_02947at 3092.815 kb on - strand, within ECD_02947at 3092.831 kb on + strand, within ECD_02947at 3092.851 kb on + strand, within ECD_02947at 3092.967 kb on + strand, within ECD_02947at 3092.968 kb on - strand, within ECD_02947at 3093.006 kb on - strand, within ECD_02947at 3093.045 kb on + strand, within ECD_02947at 3093.045 kb on + strand, within ECD_02947

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Per-strain Table

Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI
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3,090,850 + ECD_02945 0.69 +4.4
3,090,850 + ECD_02945 0.69 +0.8
3,091,101 + ECD_02945 0.77 -2.6
3,091,184 + ECD_02945 0.80 -0.9
3,091,184 + ECD_02945 0.80 -1.7
3,091,184 + ECD_02945 0.80 -2.5
3,091,185 - ECD_02945 0.80 +0.2
3,091,185 - ECD_02945 0.80 -0.8
3,091,185 - ECD_02945 0.80 +0.5
3,091,320 - ECD_02945 0.84 +0.2
3,091,320 - ECD_02945 0.84 -0.3
3,091,343 + ECD_02945 0.85 +1.2
3,091,375 + ECD_02945 0.86 -2.1
3,091,412 + ECD_02945 0.87 -2.1
3,091,413 - ECD_02945 0.87 -3.1
3,091,435 + ECD_02945 0.88 +0.1
3,091,513 + +1.1
3,091,532 + -0.7
3,091,532 + +1.4
3,091,532 + -0.8
3,091,533 - -1.3
3,091,533 - -2.7
3,091,533 - -3.2
3,091,534 + +1.6
3,091,568 - +1.5
3,091,692 - -2.1
3,091,692 - -0.7
3,091,699 + +1.1
3,091,700 - -0.7
3,091,751 + -2.2
3,091,752 - -0.0
3,091,823 + -1.1
3,091,823 + +2.1
3,091,824 - +0.8
3,091,824 - -0.8
3,091,824 - +1.7
3,091,843 + -1.7
3,091,943 - ECD_02946 0.31 -2.1
3,092,011 + ECD_02946 0.46 -2.0
3,092,337 - -1.0
3,092,337 - -0.7
3,092,468 + ECD_02947 0.11 -0.6
3,092,573 + ECD_02947 0.18 -1.1
3,092,577 - ECD_02947 0.18 -1.1
3,092,585 + ECD_02947 0.19 +1.4
3,092,589 + ECD_02947 0.19 +1.3
3,092,673 + ECD_02947 0.25 +0.7
3,092,673 + ECD_02947 0.25 -2.0
3,092,674 - ECD_02947 0.25 -2.4
3,092,675 + ECD_02947 0.25 +1.3
3,092,675 + ECD_02947 0.25 +1.0
3,092,708 + ECD_02947 0.27 -0.5
3,092,815 - ECD_02947 0.35 -2.0
3,092,831 + ECD_02947 0.36 +0.1
3,092,851 + ECD_02947 0.37 -1.3
3,092,967 + ECD_02947 0.45 -1.5
3,092,968 - ECD_02947 0.45 +0.3
3,093,006 - ECD_02947 0.48 -2.9
3,093,045 + ECD_02947 0.51 -1.8
3,093,045 + ECD_02947 0.51 -0.4

Or see this region's nucleotide sequence