Experiment: P2_phage_0.5625_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02931 and ECD_02932 overlap by 4 nucleotides ECD_02932 and ECD_02933 are separated by 47 nucleotides ECD_02933 and ECD_02934 are separated by 42 nucleotides
ECD_02931: ECD_02931 - L-tartrate dehydratase, alpha subunit, at 3,072,545 to 3,073,456
_02931
ECD_02932: ECD_02932 - L-tartrate dehydratase, beta subunit, at 3,073,453 to 3,074,058
_02932
ECD_02933: ECD_02933 - L-tartrate/succinate antiporte, at 3,074,106 to 3,075,569
_02933
ECD_02934: ECD_02934 - tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; glycation binding protein, at 3,075,612 to 3,076,625
_02934
Position (kb)
3074
3075
3076 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3073.239 kb on + strand, within ECD_02931 at 3073.240 kb on - strand, within ECD_02931 at 3073.314 kb on + strand, within ECD_02931 at 3073.314 kb on + strand, within ECD_02931 at 3073.314 kb on + strand, within ECD_02931 at 3073.314 kb on + strand, within ECD_02931 at 3073.314 kb on + strand, within ECD_02931 at 3073.314 kb on + strand, within ECD_02931 at 3073.314 kb on + strand, within ECD_02931 at 3073.314 kb on + strand, within ECD_02931 at 3073.314 kb on + strand, within ECD_02931 at 3073.315 kb on - strand, within ECD_02931 at 3073.315 kb on - strand, within ECD_02931 at 3073.315 kb on - strand, within ECD_02931 at 3073.315 kb on - strand, within ECD_02931 at 3073.315 kb on - strand, within ECD_02931 at 3073.318 kb on + strand, within ECD_02931 at 3073.318 kb on + strand, within ECD_02931 at 3073.500 kb on + strand at 3073.500 kb on + strand at 3073.522 kb on + strand, within ECD_02932 at 3073.523 kb on - strand, within ECD_02932 at 3073.693 kb on - strand, within ECD_02932 at 3073.699 kb on - strand, within ECD_02932 at 3073.699 kb on - strand, within ECD_02932 at 3073.722 kb on + strand, within ECD_02932 at 3073.808 kb on + strand, within ECD_02932 at 3073.808 kb on + strand, within ECD_02932 at 3073.809 kb on - strand, within ECD_02932 at 3073.950 kb on + strand, within ECD_02932 at 3073.950 kb on + strand, within ECD_02932 at 3073.951 kb on - strand, within ECD_02932 at 3074.047 kb on + strand at 3074.056 kb on + strand at 3074.056 kb on + strand at 3074.056 kb on + strand at 3074.099 kb on + strand at 3074.100 kb on - strand at 3074.100 kb on - strand at 3074.133 kb on + strand at 3074.162 kb on + strand at 3074.162 kb on + strand at 3074.201 kb on + strand at 3074.201 kb on + strand at 3074.202 kb on - strand at 3074.202 kb on - strand at 3074.289 kb on - strand, within ECD_02933 at 3074.435 kb on + strand, within ECD_02933 at 3074.435 kb on + strand, within ECD_02933 at 3074.567 kb on - strand, within ECD_02933 at 3074.600 kb on + strand, within ECD_02933 at 3074.600 kb on + strand, within ECD_02933 at 3074.601 kb on - strand, within ECD_02933 at 3074.601 kb on - strand, within ECD_02933 at 3074.601 kb on - strand, within ECD_02933 at 3074.601 kb on - strand, within ECD_02933 at 3074.601 kb on - strand, within ECD_02933 at 3074.605 kb on - strand, within ECD_02933 at 3074.634 kb on + strand, within ECD_02933 at 3074.635 kb on - strand, within ECD_02933 at 3074.679 kb on + strand, within ECD_02933 at 3074.679 kb on + strand, within ECD_02933 at 3074.680 kb on - strand, within ECD_02933 at 3074.680 kb on - strand, within ECD_02933 at 3074.680 kb on - strand, within ECD_02933 at 3074.759 kb on - strand, within ECD_02933 at 3074.759 kb on - strand, within ECD_02933 at 3074.868 kb on + strand, within ECD_02933 at 3074.869 kb on - strand, within ECD_02933 at 3074.869 kb on - strand, within ECD_02933 at 3074.878 kb on - strand, within ECD_02933 at 3075.021 kb on + strand, within ECD_02933 at 3075.021 kb on + strand, within ECD_02933 at 3075.021 kb on + strand, within ECD_02933 at 3075.021 kb on + strand, within ECD_02933 at 3075.022 kb on - strand, within ECD_02933 at 3075.022 kb on - strand, within ECD_02933 at 3075.022 kb on - strand, within ECD_02933 at 3075.022 kb on - strand, within ECD_02933 at 3075.104 kb on + strand, within ECD_02933 at 3075.107 kb on + strand, within ECD_02933 at 3075.146 kb on + strand, within ECD_02933 at 3075.183 kb on - strand, within ECD_02933 at 3075.185 kb on + strand, within ECD_02933 at 3075.206 kb on - strand, within ECD_02933 at 3075.217 kb on + strand, within ECD_02933 at 3075.268 kb on - strand, within ECD_02933 at 3075.303 kb on + strand, within ECD_02933 at 3075.303 kb on + strand, within ECD_02933 at 3075.303 kb on + strand, within ECD_02933 at 3075.303 kb on + strand, within ECD_02933 at 3075.304 kb on - strand, within ECD_02933 at 3075.304 kb on - strand, within ECD_02933 at 3075.304 kb on - strand, within ECD_02933 at 3075.305 kb on + strand, within ECD_02933 at 3075.305 kb on + strand, within ECD_02933 at 3075.305 kb on + strand, within ECD_02933 at 3075.305 kb on + strand, within ECD_02933 at 3075.416 kb on + strand, within ECD_02933 at 3075.417 kb on - strand, within ECD_02933 at 3075.417 kb on - strand, within ECD_02933 at 3075.424 kb on - strand at 3075.424 kb on - strand at 3075.448 kb on - strand at 3075.520 kb on + strand at 3075.520 kb on + strand at 3075.541 kb on + strand at 3075.541 kb on + strand at 3075.541 kb on + strand at 3075.567 kb on + strand at 3075.568 kb on - strand at 3075.613 kb on + strand at 3075.624 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI remove 3,073,239 + ECD_02931 0.76 +2.9 3,073,240 - ECD_02931 0.76 -0.6 3,073,314 + ECD_02931 0.84 +1.1 3,073,314 + ECD_02931 0.84 -1.5 3,073,314 + ECD_02931 0.84 +0.8 3,073,314 + ECD_02931 0.84 +1.5 3,073,314 + ECD_02931 0.84 -2.0 3,073,314 + ECD_02931 0.84 -2.6 3,073,314 + ECD_02931 0.84 -1.9 3,073,314 + ECD_02931 0.84 -1.4 3,073,314 + ECD_02931 0.84 -0.4 3,073,315 - ECD_02931 0.84 -1.4 3,073,315 - ECD_02931 0.84 -1.2 3,073,315 - ECD_02931 0.84 +0.7 3,073,315 - ECD_02931 0.84 -1.0 3,073,315 - ECD_02931 0.84 +1.2 3,073,318 + ECD_02931 0.85 +0.4 3,073,318 + ECD_02931 0.85 -1.3 3,073,500 + +0.4 3,073,500 + -0.2 3,073,522 + ECD_02932 0.11 -0.3 3,073,523 - ECD_02932 0.12 -1.5 3,073,693 - ECD_02932 0.40 +0.5 3,073,699 - ECD_02932 0.41 +1.5 3,073,699 - ECD_02932 0.41 -0.9 3,073,722 + ECD_02932 0.44 +0.7 3,073,808 + ECD_02932 0.59 +0.4 3,073,808 + ECD_02932 0.59 -0.9 3,073,809 - ECD_02932 0.59 +1.8 3,073,950 + ECD_02932 0.82 -0.1 3,073,950 + ECD_02932 0.82 +0.4 3,073,951 - ECD_02932 0.82 -0.7 3,074,047 + -2.7 3,074,056 + +0.9 3,074,056 + +0.9 3,074,056 + -3.5 3,074,099 + +0.9 3,074,100 - +1.1 3,074,100 - +1.3 3,074,133 + +1.2 3,074,162 + -1.4 3,074,162 + -1.5 3,074,201 + +1.3 3,074,201 + +2.0 3,074,202 - -0.9 3,074,202 - +1.6 3,074,289 - ECD_02933 0.12 +2.1 3,074,435 + ECD_02933 0.22 -1.3 3,074,435 + ECD_02933 0.22 +2.5 3,074,567 - ECD_02933 0.31 -3.0 3,074,600 + ECD_02933 0.34 -1.5 3,074,600 + ECD_02933 0.34 -1.1 3,074,601 - ECD_02933 0.34 -0.4 3,074,601 - ECD_02933 0.34 +1.2 3,074,601 - ECD_02933 0.34 -2.3 3,074,601 - ECD_02933 0.34 +1.6 3,074,601 - ECD_02933 0.34 +1.5 3,074,605 - ECD_02933 0.34 -1.7 3,074,634 + ECD_02933 0.36 -2.4 3,074,635 - ECD_02933 0.36 +1.9 3,074,679 + ECD_02933 0.39 +1.4 3,074,679 + ECD_02933 0.39 -1.1 3,074,680 - ECD_02933 0.39 -0.6 3,074,680 - ECD_02933 0.39 -1.5 3,074,680 - ECD_02933 0.39 +0.2 3,074,759 - ECD_02933 0.45 -0.9 3,074,759 - ECD_02933 0.45 -0.5 3,074,868 + ECD_02933 0.52 +2.0 3,074,869 - ECD_02933 0.52 +0.0 3,074,869 - ECD_02933 0.52 +0.1 3,074,878 - ECD_02933 0.53 +0.5 3,075,021 + ECD_02933 0.62 +2.8 3,075,021 + ECD_02933 0.62 +3.6 3,075,021 + ECD_02933 0.62 -0.7 3,075,021 + ECD_02933 0.62 +0.5 3,075,022 - ECD_02933 0.63 +0.3 3,075,022 - ECD_02933 0.63 -2.9 3,075,022 - ECD_02933 0.63 +2.5 3,075,022 - ECD_02933 0.63 +1.9 3,075,104 + ECD_02933 0.68 -1.4 3,075,107 + ECD_02933 0.68 +2.1 3,075,146 + ECD_02933 0.71 +0.4 3,075,183 - ECD_02933 0.74 -1.8 3,075,185 + ECD_02933 0.74 +1.1 3,075,206 - ECD_02933 0.75 +0.4 3,075,217 + ECD_02933 0.76 -0.7 3,075,268 - ECD_02933 0.79 -1.2 3,075,303 + ECD_02933 0.82 +1.2 3,075,303 + ECD_02933 0.82 +0.3 3,075,303 + ECD_02933 0.82 +0.2 3,075,303 + ECD_02933 0.82 +0.3 3,075,304 - ECD_02933 0.82 +0.4 3,075,304 - ECD_02933 0.82 +0.5 3,075,304 - ECD_02933 0.82 -2.5 3,075,305 + ECD_02933 0.82 -0.5 3,075,305 + ECD_02933 0.82 -2.1 3,075,305 + ECD_02933 0.82 -2.5 3,075,305 + ECD_02933 0.82 +0.3 3,075,416 + ECD_02933 0.89 -2.1 3,075,417 - ECD_02933 0.90 -3.0 3,075,417 - ECD_02933 0.90 -0.8 3,075,424 - -1.9 3,075,424 - -2.2 3,075,448 - +2.0 3,075,520 + +1.6 3,075,520 + +2.9 3,075,541 + -0.4 3,075,541 + +0.4 3,075,541 + +3.1 3,075,567 + -1.7 3,075,568 - -2.7 3,075,613 + +0.6 3,075,624 + -0.8
Or see this region's nucleotide sequence