Experiment: P2_phage_0.5625_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02888 and ECD_02889 are separated by 110 nucleotides ECD_02889 and ECD_02890 are separated by 74 nucleotides
ECD_02888: ECD_02888 - Radical SAM superfamily protein, at 3,026,364 to 3,028,583
_02888
ECD_02889: ECD_02889 - septal ring component that protects the divisome from stress; multicopy suppressor of ftsI(Ts), at 3,028,694 to 3,030,106
_02889
ECD_02890: ECD_02890 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 3,030,181 to 3,030,918
_02890
Position (kb)
3028
3029
3030
3031 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 3027.713 kb on - strand, within ECD_02888 at 3027.821 kb on - strand, within ECD_02888 at 3027.866 kb on + strand, within ECD_02888 at 3027.888 kb on + strand, within ECD_02888 at 3027.889 kb on - strand, within ECD_02888 at 3028.070 kb on - strand, within ECD_02888 at 3028.070 kb on - strand, within ECD_02888 at 3028.070 kb on - strand, within ECD_02888 at 3028.120 kb on - strand, within ECD_02888 at 3028.120 kb on - strand, within ECD_02888 at 3028.139 kb on + strand, within ECD_02888 at 3028.151 kb on + strand, within ECD_02888 at 3028.152 kb on - strand, within ECD_02888 at 3028.153 kb on + strand, within ECD_02888 at 3028.205 kb on - strand, within ECD_02888 at 3028.205 kb on - strand, within ECD_02888 at 3028.205 kb on - strand, within ECD_02888 at 3028.221 kb on + strand, within ECD_02888 at 3028.222 kb on - strand, within ECD_02888 at 3028.238 kb on + strand, within ECD_02888 at 3028.239 kb on - strand, within ECD_02888 at 3028.240 kb on + strand, within ECD_02888 at 3028.274 kb on + strand, within ECD_02888 at 3028.311 kb on - strand, within ECD_02888 at 3028.379 kb on + strand at 3028.379 kb on + strand at 3028.380 kb on - strand at 3028.420 kb on + strand at 3028.420 kb on + strand at 3028.420 kb on + strand at 3028.421 kb on - strand at 3028.574 kb on + strand at 3028.574 kb on + strand at 3028.575 kb on - strand at 3028.575 kb on - strand at 3028.575 kb on - strand at 3028.575 kb on - strand at 3028.658 kb on + strand at 3028.658 kb on + strand at 3028.658 kb on + strand at 3028.659 kb on - strand at 3028.768 kb on - strand at 3028.768 kb on - strand at 3028.889 kb on - strand, within ECD_02889 at 3028.904 kb on + strand, within ECD_02889 at 3029.167 kb on + strand, within ECD_02889 at 3029.352 kb on - strand, within ECD_02889 at 3029.352 kb on - strand, within ECD_02889 at 3029.376 kb on - strand, within ECD_02889 at 3029.456 kb on + strand, within ECD_02889 at 3029.456 kb on + strand, within ECD_02889 at 3029.477 kb on - strand, within ECD_02889 at 3029.522 kb on - strand, within ECD_02889 at 3029.522 kb on - strand, within ECD_02889 at 3029.531 kb on - strand, within ECD_02889 at 3029.647 kb on - strand, within ECD_02889 at 3029.784 kb on - strand, within ECD_02889 at 3029.839 kb on + strand, within ECD_02889 at 3029.839 kb on + strand, within ECD_02889 at 3029.840 kb on - strand, within ECD_02889 at 3029.952 kb on - strand, within ECD_02889 at 3029.952 kb on - strand, within ECD_02889 at 3030.107 kb on - strand at 3030.120 kb on - strand at 3030.135 kb on - strand at 3030.953 kb on - strand at 3030.953 kb on - strand at 3030.953 kb on - strand at 3030.953 kb on - strand at 3030.953 kb on - strand at 3030.953 kb on - strand at 3030.953 kb on - strand at 3030.953 kb on - strand at 3031.075 kb on + strand at 3031.075 kb on + strand at 3031.076 kb on - strand at 3031.076 kb on - strand at 3031.095 kb on + strand at 3031.096 kb on - strand at 3031.096 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI remove 3,027,713 - ECD_02888 0.61 +1.1 3,027,821 - ECD_02888 0.66 +2.8 3,027,866 + ECD_02888 0.68 -2.6 3,027,888 + ECD_02888 0.69 -2.0 3,027,889 - ECD_02888 0.69 +1.4 3,028,070 - ECD_02888 0.77 -0.9 3,028,070 - ECD_02888 0.77 +0.5 3,028,070 - ECD_02888 0.77 -1.8 3,028,120 - ECD_02888 0.79 -2.4 3,028,120 - ECD_02888 0.79 +0.4 3,028,139 + ECD_02888 0.80 +1.5 3,028,151 + ECD_02888 0.80 +0.8 3,028,152 - ECD_02888 0.81 -2.8 3,028,153 + ECD_02888 0.81 +0.6 3,028,205 - ECD_02888 0.83 -2.2 3,028,205 - ECD_02888 0.83 +2.5 3,028,205 - ECD_02888 0.83 -0.8 3,028,221 + ECD_02888 0.84 +1.9 3,028,222 - ECD_02888 0.84 +0.1 3,028,238 + ECD_02888 0.84 -1.4 3,028,239 - ECD_02888 0.84 -0.6 3,028,240 + ECD_02888 0.85 +2.4 3,028,274 + ECD_02888 0.86 -0.7 3,028,311 - ECD_02888 0.88 -2.8 3,028,379 + -0.5 3,028,379 + -2.1 3,028,380 - +1.9 3,028,420 + -1.7 3,028,420 + -1.2 3,028,420 + +0.3 3,028,421 - +0.2 3,028,574 + +0.4 3,028,574 + -1.7 3,028,575 - -2.1 3,028,575 - -2.1 3,028,575 - -1.9 3,028,575 - +2.1 3,028,658 + -1.4 3,028,658 + -1.2 3,028,658 + -2.3 3,028,659 - -3.9 3,028,768 - -2.7 3,028,768 - -3.4 3,028,889 - ECD_02889 0.14 -3.1 3,028,904 + ECD_02889 0.15 -1.0 3,029,167 + ECD_02889 0.33 +0.5 3,029,352 - ECD_02889 0.47 -2.9 3,029,352 - ECD_02889 0.47 -2.3 3,029,376 - ECD_02889 0.48 -2.8 3,029,456 + ECD_02889 0.54 -1.3 3,029,456 + ECD_02889 0.54 +0.5 3,029,477 - ECD_02889 0.55 -3.4 3,029,522 - ECD_02889 0.59 -0.7 3,029,522 - ECD_02889 0.59 -2.1 3,029,531 - ECD_02889 0.59 -2.6 3,029,647 - ECD_02889 0.67 -2.8 3,029,784 - ECD_02889 0.77 -1.4 3,029,839 + ECD_02889 0.81 -2.2 3,029,839 + ECD_02889 0.81 -1.5 3,029,840 - ECD_02889 0.81 -1.7 3,029,952 - ECD_02889 0.89 -2.5 3,029,952 - ECD_02889 0.89 -0.8 3,030,107 - -2.6 3,030,120 - +0.7 3,030,135 - -1.4 3,030,953 - -1.2 3,030,953 - +1.4 3,030,953 - -1.8 3,030,953 - +1.5 3,030,953 - -0.7 3,030,953 - +0.3 3,030,953 - +4.1 3,030,953 - +1.0 3,031,075 + -0.8 3,031,075 + -0.5 3,031,076 - -3.3 3,031,076 - +0.7 3,031,095 + -0.8 3,031,096 - -2.1 3,031,096 - -0.4
Or see this region's nucleotide sequence