Strain Fitness in Escherichia coli BL21 around ECD_02667

Experiment: P2_phage_0.5625_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02666 and ECD_02667 are separated by 61 nucleotidesECD_02667 and ECD_02668 overlap by 1 nucleotides ECD_02666: ECD_02666 - amino acid N-acetyltransferase and inactive acetylglutamate kinase, at 2,787,522 to 2,788,853 _02666 ECD_02667: ECD_02667 - exonuclease V (RecBCD complex), alpha chain, at 2,788,915 to 2,790,741 _02667 ECD_02668: ECD_02668 - exonuclease V (RecBCD complex), beta subunit, at 2,790,741 to 2,794,283 _02668 Position (kb) 2788 2789 2790 2791Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2787.924 kb on - strand, within ECD_02666at 2787.960 kb on + strand, within ECD_02666at 2788.030 kb on + strand, within ECD_02666at 2788.031 kb on - strand, within ECD_02666at 2788.166 kb on + strand, within ECD_02666at 2788.166 kb on + strand, within ECD_02666at 2788.167 kb on - strand, within ECD_02666at 2788.181 kb on + strand, within ECD_02666at 2788.248 kb on + strand, within ECD_02666at 2788.248 kb on + strand, within ECD_02666at 2788.248 kb on + strand, within ECD_02666at 2788.248 kb on + strand, within ECD_02666at 2788.248 kb on + strand, within ECD_02666at 2788.248 kb on + strand, within ECD_02666at 2788.321 kb on + strand, within ECD_02666at 2788.321 kb on + strand, within ECD_02666at 2788.321 kb on + strand, within ECD_02666at 2788.329 kb on + strand, within ECD_02666at 2788.481 kb on + strand, within ECD_02666at 2788.481 kb on + strand, within ECD_02666at 2788.481 kb on + strand, within ECD_02666at 2788.538 kb on + strand, within ECD_02666at 2788.538 kb on + strand, within ECD_02666at 2788.559 kb on + strand, within ECD_02666at 2788.578 kb on + strand, within ECD_02666at 2788.702 kb on + strand, within ECD_02666at 2788.734 kb on - strandat 2788.806 kb on + strandat 2788.806 kb on + strandat 2788.806 kb on + strandat 2788.806 kb on + strandat 2788.806 kb on + strandat 2788.807 kb on - strandat 2788.812 kb on + strandat 2788.813 kb on - strandat 2788.910 kb on + strandat 2788.910 kb on + strandat 2788.910 kb on + strandat 2788.911 kb on - strandat 2788.911 kb on - strandat 2788.911 kb on - strandat 2788.916 kb on + strandat 2788.916 kb on + strandat 2788.917 kb on - strandat 2788.917 kb on - strandat 2788.929 kb on + strandat 2788.929 kb on + strandat 2788.929 kb on + strandat 2788.929 kb on + strandat 2788.929 kb on + strandat 2788.929 kb on + strandat 2788.929 kb on + strandat 2788.929 kb on + strandat 2788.929 kb on + strandat 2788.930 kb on - strandat 2788.930 kb on - strandat 2788.930 kb on - strandat 2788.962 kb on + strandat 2788.963 kb on - strandat 2788.984 kb on + strandat 2788.984 kb on + strandat 2788.984 kb on + strandat 2788.984 kb on + strandat 2788.984 kb on + strandat 2788.984 kb on + strandat 2788.984 kb on + strandat 2788.985 kb on - strandat 2788.985 kb on - strandat 2788.985 kb on - strandat 2788.987 kb on + strandat 2788.987 kb on + strandat 2788.988 kb on - strandat 2788.989 kb on + strandat 2788.989 kb on + strandat 2788.990 kb on - strandat 2788.990 kb on - strandat 2788.990 kb on - strandat 2789.003 kb on + strandat 2789.042 kb on + strandat 2789.043 kb on - strandat 2789.043 kb on - strandat 2789.043 kb on - strandat 2789.045 kb on - strandat 2789.124 kb on + strand, within ECD_02667at 2789.124 kb on + strand, within ECD_02667at 2789.124 kb on + strand, within ECD_02667at 2789.124 kb on + strand, within ECD_02667at 2789.124 kb on + strand, within ECD_02667at 2789.124 kb on + strand, within ECD_02667at 2789.124 kb on + strand, within ECD_02667at 2789.124 kb on + strand, within ECD_02667at 2789.124 kb on + strand, within ECD_02667at 2789.125 kb on - strand, within ECD_02667at 2789.128 kb on + strand, within ECD_02667at 2789.128 kb on + strand, within ECD_02667at 2789.128 kb on + strand, within ECD_02667at 2789.129 kb on - strand, within ECD_02667at 2789.145 kb on + strand, within ECD_02667at 2789.145 kb on + strand, within ECD_02667at 2789.146 kb on - strand, within ECD_02667at 2789.146 kb on - strand, within ECD_02667at 2789.146 kb on - strand, within ECD_02667at 2789.146 kb on - strand, within ECD_02667at 2789.146 kb on - strand, within ECD_02667at 2789.184 kb on + strand, within ECD_02667at 2789.184 kb on + strand, within ECD_02667at 2789.185 kb on - strand, within ECD_02667at 2789.185 kb on - strand, within ECD_02667at 2789.185 kb on - strand, within ECD_02667at 2789.185 kb on - strand, within ECD_02667at 2789.185 kb on - strand, within ECD_02667at 2789.187 kb on + strand, within ECD_02667at 2789.187 kb on + strand, within ECD_02667at 2789.187 kb on + strand, within ECD_02667at 2789.313 kb on - strand, within ECD_02667at 2789.453 kb on - strand, within ECD_02667at 2789.529 kb on + strand, within ECD_02667at 2789.531 kb on + strand, within ECD_02667at 2789.531 kb on + strand, within ECD_02667at 2789.572 kb on - strand, within ECD_02667at 2789.607 kb on + strand, within ECD_02667at 2789.756 kb on - strand, within ECD_02667at 2789.796 kb on - strand, within ECD_02667at 2789.910 kb on + strand, within ECD_02667at 2789.911 kb on - strand, within ECD_02667at 2789.911 kb on - strand, within ECD_02667at 2789.911 kb on - strand, within ECD_02667at 2789.939 kb on - strand, within ECD_02667at 2789.939 kb on - strand, within ECD_02667at 2789.939 kb on - strand, within ECD_02667at 2789.984 kb on - strand, within ECD_02667at 2789.984 kb on - strand, within ECD_02667at 2790.302 kb on - strand, within ECD_02667at 2790.420 kb on - strand, within ECD_02667at 2790.509 kb on - strand, within ECD_02667at 2790.695 kb on - strandat 2790.721 kb on + strandat 2790.722 kb on - strandat 2790.743 kb on - strandat 2790.942 kb on - strandat 2790.953 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI
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2,787,924 - ECD_02666 0.30 -1.3
2,787,960 + ECD_02666 0.33 +0.9
2,788,030 + ECD_02666 0.38 +0.9
2,788,031 - ECD_02666 0.38 -1.4
2,788,166 + ECD_02666 0.48 -1.9
2,788,166 + ECD_02666 0.48 +1.4
2,788,167 - ECD_02666 0.48 -1.1
2,788,181 + ECD_02666 0.49 -1.0
2,788,248 + ECD_02666 0.55 -1.7
2,788,248 + ECD_02666 0.55 -2.4
2,788,248 + ECD_02666 0.55 +1.3
2,788,248 + ECD_02666 0.55 +0.4
2,788,248 + ECD_02666 0.55 +1.0
2,788,248 + ECD_02666 0.55 -1.0
2,788,321 + ECD_02666 0.60 -2.0
2,788,321 + ECD_02666 0.60 +1.8
2,788,321 + ECD_02666 0.60 -1.0
2,788,329 + ECD_02666 0.61 +2.4
2,788,481 + ECD_02666 0.72 -1.9
2,788,481 + ECD_02666 0.72 -0.1
2,788,481 + ECD_02666 0.72 -2.1
2,788,538 + ECD_02666 0.76 +1.8
2,788,538 + ECD_02666 0.76 +1.6
2,788,559 + ECD_02666 0.78 -0.6
2,788,578 + ECD_02666 0.79 -0.9
2,788,702 + ECD_02666 0.89 +0.4
2,788,734 - +2.9
2,788,806 + -1.1
2,788,806 + +0.3
2,788,806 + -2.8
2,788,806 + -2.7
2,788,806 + +1.3
2,788,807 - -1.8
2,788,812 + +0.6
2,788,813 - +1.6
2,788,910 + +1.2
2,788,910 + +1.0
2,788,910 + -1.5
2,788,911 - +1.2
2,788,911 - -2.6
2,788,911 - +0.8
2,788,916 + -1.5
2,788,916 + -0.7
2,788,917 - -1.3
2,788,917 - -0.8
2,788,929 + +1.4
2,788,929 + +2.7
2,788,929 + -0.3
2,788,929 + -1.6
2,788,929 + +1.8
2,788,929 + +1.0
2,788,929 + -1.6
2,788,929 + +3.6
2,788,929 + +1.0
2,788,930 - -1.8
2,788,930 - +1.2
2,788,930 - -2.4
2,788,962 + -2.7
2,788,963 - +0.2
2,788,984 + -2.2
2,788,984 + -1.6
2,788,984 + -2.0
2,788,984 + -1.5
2,788,984 + -0.3
2,788,984 + +2.3
2,788,984 + -1.9
2,788,985 - -1.1
2,788,985 - -2.3
2,788,985 - -3.3
2,788,987 + -2.5
2,788,987 + -1.6
2,788,988 - -1.3
2,788,989 + -2.1
2,788,989 + -2.1
2,788,990 - -1.7
2,788,990 - -0.4
2,788,990 - -1.4
2,789,003 + -1.7
2,789,042 + -2.4
2,789,043 - -1.4
2,789,043 - -0.9
2,789,043 - -1.2
2,789,045 - -2.5
2,789,124 + ECD_02667 0.11 -2.5
2,789,124 + ECD_02667 0.11 -2.3
2,789,124 + ECD_02667 0.11 +1.2
2,789,124 + ECD_02667 0.11 -1.5
2,789,124 + ECD_02667 0.11 -2.6
2,789,124 + ECD_02667 0.11 +0.1
2,789,124 + ECD_02667 0.11 -2.0
2,789,124 + ECD_02667 0.11 -0.3
2,789,124 + ECD_02667 0.11 -2.5
2,789,125 - ECD_02667 0.11 -1.6
2,789,128 + ECD_02667 0.12 -0.8
2,789,128 + ECD_02667 0.12 -0.9
2,789,128 + ECD_02667 0.12 -2.1
2,789,129 - ECD_02667 0.12 -0.3
2,789,145 + ECD_02667 0.13 -2.2
2,789,145 + ECD_02667 0.13 -2.2
2,789,146 - ECD_02667 0.13 -1.5
2,789,146 - ECD_02667 0.13 -2.5
2,789,146 - ECD_02667 0.13 -0.9
2,789,146 - ECD_02667 0.13 -1.6
2,789,146 - ECD_02667 0.13 -4.6
2,789,184 + ECD_02667 0.15 -1.1
2,789,184 + ECD_02667 0.15 -0.1
2,789,185 - ECD_02667 0.15 -1.8
2,789,185 - ECD_02667 0.15 -2.7
2,789,185 - ECD_02667 0.15 -1.7
2,789,185 - ECD_02667 0.15 -0.5
2,789,185 - ECD_02667 0.15 -1.6
2,789,187 + ECD_02667 0.15 -1.3
2,789,187 + ECD_02667 0.15 -2.8
2,789,187 + ECD_02667 0.15 -0.7
2,789,313 - ECD_02667 0.22 -1.3
2,789,453 - ECD_02667 0.29 -0.3
2,789,529 + ECD_02667 0.34 -1.7
2,789,531 + ECD_02667 0.34 -2.1
2,789,531 + ECD_02667 0.34 -1.1
2,789,572 - ECD_02667 0.36 -2.7
2,789,607 + ECD_02667 0.38 -0.7
2,789,756 - ECD_02667 0.46 -2.2
2,789,796 - ECD_02667 0.48 -2.5
2,789,910 + ECD_02667 0.54 -0.9
2,789,911 - ECD_02667 0.55 -1.2
2,789,911 - ECD_02667 0.55 -2.7
2,789,911 - ECD_02667 0.55 -2.1
2,789,939 - ECD_02667 0.56 -0.7
2,789,939 - ECD_02667 0.56 -2.2
2,789,939 - ECD_02667 0.56 -1.1
2,789,984 - ECD_02667 0.59 +0.4
2,789,984 - ECD_02667 0.59 -0.6
2,790,302 - ECD_02667 0.76 -0.0
2,790,420 - ECD_02667 0.82 -2.1
2,790,509 - ECD_02667 0.87 -0.6
2,790,695 - -3.5
2,790,721 + -2.3
2,790,722 - -1.9
2,790,743 - +0.7
2,790,942 - -0.3
2,790,953 - -1.1

Or see this region's nucleotide sequence