Experiment: P2_phage_0.5625_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02666 and ECD_02667 are separated by 61 nucleotides ECD_02667 and ECD_02668 overlap by 1 nucleotides
ECD_02666: ECD_02666 - amino acid N-acetyltransferase and inactive acetylglutamate kinase, at 2,787,522 to 2,788,853
_02666
ECD_02667: ECD_02667 - exonuclease V (RecBCD complex), alpha chain, at 2,788,915 to 2,790,741
_02667
ECD_02668: ECD_02668 - exonuclease V (RecBCD complex), beta subunit, at 2,790,741 to 2,794,283
_02668
Position (kb)
2788
2789
2790
2791 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2787.924 kb on - strand, within ECD_02666 at 2787.960 kb on + strand, within ECD_02666 at 2788.030 kb on + strand, within ECD_02666 at 2788.031 kb on - strand, within ECD_02666 at 2788.166 kb on + strand, within ECD_02666 at 2788.166 kb on + strand, within ECD_02666 at 2788.167 kb on - strand, within ECD_02666 at 2788.181 kb on + strand, within ECD_02666 at 2788.248 kb on + strand, within ECD_02666 at 2788.248 kb on + strand, within ECD_02666 at 2788.248 kb on + strand, within ECD_02666 at 2788.248 kb on + strand, within ECD_02666 at 2788.248 kb on + strand, within ECD_02666 at 2788.248 kb on + strand, within ECD_02666 at 2788.321 kb on + strand, within ECD_02666 at 2788.321 kb on + strand, within ECD_02666 at 2788.321 kb on + strand, within ECD_02666 at 2788.329 kb on + strand, within ECD_02666 at 2788.481 kb on + strand, within ECD_02666 at 2788.481 kb on + strand, within ECD_02666 at 2788.481 kb on + strand, within ECD_02666 at 2788.538 kb on + strand, within ECD_02666 at 2788.538 kb on + strand, within ECD_02666 at 2788.559 kb on + strand, within ECD_02666 at 2788.578 kb on + strand, within ECD_02666 at 2788.702 kb on + strand, within ECD_02666 at 2788.734 kb on - strand at 2788.806 kb on + strand at 2788.806 kb on + strand at 2788.806 kb on + strand at 2788.806 kb on + strand at 2788.806 kb on + strand at 2788.807 kb on - strand at 2788.812 kb on + strand at 2788.813 kb on - strand at 2788.910 kb on + strand at 2788.910 kb on + strand at 2788.910 kb on + strand at 2788.911 kb on - strand at 2788.911 kb on - strand at 2788.911 kb on - strand at 2788.916 kb on + strand at 2788.916 kb on + strand at 2788.917 kb on - strand at 2788.917 kb on - strand at 2788.929 kb on + strand at 2788.929 kb on + strand at 2788.929 kb on + strand at 2788.929 kb on + strand at 2788.929 kb on + strand at 2788.929 kb on + strand at 2788.929 kb on + strand at 2788.929 kb on + strand at 2788.929 kb on + strand at 2788.930 kb on - strand at 2788.930 kb on - strand at 2788.930 kb on - strand at 2788.962 kb on + strand at 2788.963 kb on - strand at 2788.984 kb on + strand at 2788.984 kb on + strand at 2788.984 kb on + strand at 2788.984 kb on + strand at 2788.984 kb on + strand at 2788.984 kb on + strand at 2788.984 kb on + strand at 2788.985 kb on - strand at 2788.985 kb on - strand at 2788.985 kb on - strand at 2788.987 kb on + strand at 2788.987 kb on + strand at 2788.988 kb on - strand at 2788.989 kb on + strand at 2788.989 kb on + strand at 2788.990 kb on - strand at 2788.990 kb on - strand at 2788.990 kb on - strand at 2789.003 kb on + strand at 2789.042 kb on + strand at 2789.043 kb on - strand at 2789.043 kb on - strand at 2789.043 kb on - strand at 2789.045 kb on - strand at 2789.124 kb on + strand, within ECD_02667 at 2789.124 kb on + strand, within ECD_02667 at 2789.124 kb on + strand, within ECD_02667 at 2789.124 kb on + strand, within ECD_02667 at 2789.124 kb on + strand, within ECD_02667 at 2789.124 kb on + strand, within ECD_02667 at 2789.124 kb on + strand, within ECD_02667 at 2789.124 kb on + strand, within ECD_02667 at 2789.124 kb on + strand, within ECD_02667 at 2789.125 kb on - strand, within ECD_02667 at 2789.128 kb on + strand, within ECD_02667 at 2789.128 kb on + strand, within ECD_02667 at 2789.128 kb on + strand, within ECD_02667 at 2789.129 kb on - strand, within ECD_02667 at 2789.145 kb on + strand, within ECD_02667 at 2789.145 kb on + strand, within ECD_02667 at 2789.146 kb on - strand, within ECD_02667 at 2789.146 kb on - strand, within ECD_02667 at 2789.146 kb on - strand, within ECD_02667 at 2789.146 kb on - strand, within ECD_02667 at 2789.146 kb on - strand, within ECD_02667 at 2789.184 kb on + strand, within ECD_02667 at 2789.184 kb on + strand, within ECD_02667 at 2789.185 kb on - strand, within ECD_02667 at 2789.185 kb on - strand, within ECD_02667 at 2789.185 kb on - strand, within ECD_02667 at 2789.185 kb on - strand, within ECD_02667 at 2789.185 kb on - strand, within ECD_02667 at 2789.187 kb on + strand, within ECD_02667 at 2789.187 kb on + strand, within ECD_02667 at 2789.187 kb on + strand, within ECD_02667 at 2789.313 kb on - strand, within ECD_02667 at 2789.453 kb on - strand, within ECD_02667 at 2789.529 kb on + strand, within ECD_02667 at 2789.531 kb on + strand, within ECD_02667 at 2789.531 kb on + strand, within ECD_02667 at 2789.572 kb on - strand, within ECD_02667 at 2789.607 kb on + strand, within ECD_02667 at 2789.756 kb on - strand, within ECD_02667 at 2789.796 kb on - strand, within ECD_02667 at 2789.910 kb on + strand, within ECD_02667 at 2789.911 kb on - strand, within ECD_02667 at 2789.911 kb on - strand, within ECD_02667 at 2789.911 kb on - strand, within ECD_02667 at 2789.939 kb on - strand, within ECD_02667 at 2789.939 kb on - strand, within ECD_02667 at 2789.939 kb on - strand, within ECD_02667 at 2789.984 kb on - strand, within ECD_02667 at 2789.984 kb on - strand, within ECD_02667 at 2790.302 kb on - strand, within ECD_02667 at 2790.420 kb on - strand, within ECD_02667 at 2790.509 kb on - strand, within ECD_02667 at 2790.695 kb on - strand at 2790.721 kb on + strand at 2790.722 kb on - strand at 2790.743 kb on - strand at 2790.942 kb on - strand at 2790.953 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI remove 2,787,924 - ECD_02666 0.30 -1.3 2,787,960 + ECD_02666 0.33 +0.9 2,788,030 + ECD_02666 0.38 +0.9 2,788,031 - ECD_02666 0.38 -1.4 2,788,166 + ECD_02666 0.48 -1.9 2,788,166 + ECD_02666 0.48 +1.4 2,788,167 - ECD_02666 0.48 -1.1 2,788,181 + ECD_02666 0.49 -1.0 2,788,248 + ECD_02666 0.55 -1.7 2,788,248 + ECD_02666 0.55 -2.4 2,788,248 + ECD_02666 0.55 +1.3 2,788,248 + ECD_02666 0.55 +0.4 2,788,248 + ECD_02666 0.55 +1.0 2,788,248 + ECD_02666 0.55 -1.0 2,788,321 + ECD_02666 0.60 -2.0 2,788,321 + ECD_02666 0.60 +1.8 2,788,321 + ECD_02666 0.60 -1.0 2,788,329 + ECD_02666 0.61 +2.4 2,788,481 + ECD_02666 0.72 -1.9 2,788,481 + ECD_02666 0.72 -0.1 2,788,481 + ECD_02666 0.72 -2.1 2,788,538 + ECD_02666 0.76 +1.8 2,788,538 + ECD_02666 0.76 +1.6 2,788,559 + ECD_02666 0.78 -0.6 2,788,578 + ECD_02666 0.79 -0.9 2,788,702 + ECD_02666 0.89 +0.4 2,788,734 - +2.9 2,788,806 + -1.1 2,788,806 + +0.3 2,788,806 + -2.8 2,788,806 + -2.7 2,788,806 + +1.3 2,788,807 - -1.8 2,788,812 + +0.6 2,788,813 - +1.6 2,788,910 + +1.2 2,788,910 + +1.0 2,788,910 + -1.5 2,788,911 - +1.2 2,788,911 - -2.6 2,788,911 - +0.8 2,788,916 + -1.5 2,788,916 + -0.7 2,788,917 - -1.3 2,788,917 - -0.8 2,788,929 + +1.4 2,788,929 + +2.7 2,788,929 + -0.3 2,788,929 + -1.6 2,788,929 + +1.8 2,788,929 + +1.0 2,788,929 + -1.6 2,788,929 + +3.6 2,788,929 + +1.0 2,788,930 - -1.8 2,788,930 - +1.2 2,788,930 - -2.4 2,788,962 + -2.7 2,788,963 - +0.2 2,788,984 + -2.2 2,788,984 + -1.6 2,788,984 + -2.0 2,788,984 + -1.5 2,788,984 + -0.3 2,788,984 + +2.3 2,788,984 + -1.9 2,788,985 - -1.1 2,788,985 - -2.3 2,788,985 - -3.3 2,788,987 + -2.5 2,788,987 + -1.6 2,788,988 - -1.3 2,788,989 + -2.1 2,788,989 + -2.1 2,788,990 - -1.7 2,788,990 - -0.4 2,788,990 - -1.4 2,789,003 + -1.7 2,789,042 + -2.4 2,789,043 - -1.4 2,789,043 - -0.9 2,789,043 - -1.2 2,789,045 - -2.5 2,789,124 + ECD_02667 0.11 -2.5 2,789,124 + ECD_02667 0.11 -2.3 2,789,124 + ECD_02667 0.11 +1.2 2,789,124 + ECD_02667 0.11 -1.5 2,789,124 + ECD_02667 0.11 -2.6 2,789,124 + ECD_02667 0.11 +0.1 2,789,124 + ECD_02667 0.11 -2.0 2,789,124 + ECD_02667 0.11 -0.3 2,789,124 + ECD_02667 0.11 -2.5 2,789,125 - ECD_02667 0.11 -1.6 2,789,128 + ECD_02667 0.12 -0.8 2,789,128 + ECD_02667 0.12 -0.9 2,789,128 + ECD_02667 0.12 -2.1 2,789,129 - ECD_02667 0.12 -0.3 2,789,145 + ECD_02667 0.13 -2.2 2,789,145 + ECD_02667 0.13 -2.2 2,789,146 - ECD_02667 0.13 -1.5 2,789,146 - ECD_02667 0.13 -2.5 2,789,146 - ECD_02667 0.13 -0.9 2,789,146 - ECD_02667 0.13 -1.6 2,789,146 - ECD_02667 0.13 -4.6 2,789,184 + ECD_02667 0.15 -1.1 2,789,184 + ECD_02667 0.15 -0.1 2,789,185 - ECD_02667 0.15 -1.8 2,789,185 - ECD_02667 0.15 -2.7 2,789,185 - ECD_02667 0.15 -1.7 2,789,185 - ECD_02667 0.15 -0.5 2,789,185 - ECD_02667 0.15 -1.6 2,789,187 + ECD_02667 0.15 -1.3 2,789,187 + ECD_02667 0.15 -2.8 2,789,187 + ECD_02667 0.15 -0.7 2,789,313 - ECD_02667 0.22 -1.3 2,789,453 - ECD_02667 0.29 -0.3 2,789,529 + ECD_02667 0.34 -1.7 2,789,531 + ECD_02667 0.34 -2.1 2,789,531 + ECD_02667 0.34 -1.1 2,789,572 - ECD_02667 0.36 -2.7 2,789,607 + ECD_02667 0.38 -0.7 2,789,756 - ECD_02667 0.46 -2.2 2,789,796 - ECD_02667 0.48 -2.5 2,789,910 + ECD_02667 0.54 -0.9 2,789,911 - ECD_02667 0.55 -1.2 2,789,911 - ECD_02667 0.55 -2.7 2,789,911 - ECD_02667 0.55 -2.1 2,789,939 - ECD_02667 0.56 -0.7 2,789,939 - ECD_02667 0.56 -2.2 2,789,939 - ECD_02667 0.56 -1.1 2,789,984 - ECD_02667 0.59 +0.4 2,789,984 - ECD_02667 0.59 -0.6 2,790,302 - ECD_02667 0.76 -0.0 2,790,420 - ECD_02667 0.82 -2.1 2,790,509 - ECD_02667 0.87 -0.6 2,790,695 - -3.5 2,790,721 + -2.3 2,790,722 - -1.9 2,790,743 - +0.7 2,790,942 - -0.3 2,790,953 - -1.1
Or see this region's nucleotide sequence