Strain Fitness in Escherichia coli BL21 around ECD_02666

Experiment: P2_phage_0.5625_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02665 and ECD_02666 are separated by 231 nucleotidesECD_02666 and ECD_02667 are separated by 61 nucleotides ECD_02665: ECD_02665 - N-acetylmuramoyl-L-alanine amidase, at 2,786,037 to 2,787,290 _02665 ECD_02666: ECD_02666 - amino acid N-acetyltransferase and inactive acetylglutamate kinase, at 2,787,522 to 2,788,853 _02666 ECD_02667: ECD_02667 - exonuclease V (RecBCD complex), alpha chain, at 2,788,915 to 2,790,741 _02667 Position (kb) 2787 2788 2789Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2786.587 kb on + strand, within ECD_02665at 2786.588 kb on - strand, within ECD_02665at 2786.588 kb on - strand, within ECD_02665at 2786.588 kb on - strand, within ECD_02665at 2786.588 kb on - strand, within ECD_02665at 2786.588 kb on - strand, within ECD_02665at 2786.588 kb on - strand, within ECD_02665at 2786.588 kb on - strand, within ECD_02665at 2786.588 kb on - strand, within ECD_02665at 2786.588 kb on - strand, within ECD_02665at 2786.588 kb on - strand, within ECD_02665at 2786.598 kb on - strand, within ECD_02665at 2786.598 kb on - strand, within ECD_02665at 2786.598 kb on - strand, within ECD_02665at 2786.637 kb on + strand, within ECD_02665at 2786.637 kb on + strand, within ECD_02665at 2786.638 kb on - strand, within ECD_02665at 2786.638 kb on - strand, within ECD_02665at 2786.672 kb on - strand, within ECD_02665at 2786.720 kb on + strand, within ECD_02665at 2786.721 kb on - strand, within ECD_02665at 2786.721 kb on - strand, within ECD_02665at 2786.721 kb on - strand, within ECD_02665at 2786.721 kb on - strand, within ECD_02665at 2786.809 kb on + strand, within ECD_02665at 2786.809 kb on + strand, within ECD_02665at 2786.810 kb on - strand, within ECD_02665at 2786.889 kb on - strand, within ECD_02665at 2786.941 kb on - strand, within ECD_02665at 2786.958 kb on + strand, within ECD_02665at 2787.058 kb on - strand, within ECD_02665at 2787.058 kb on - strand, within ECD_02665at 2787.092 kb on + strand, within ECD_02665at 2787.093 kb on - strand, within ECD_02665at 2787.111 kb on - strand, within ECD_02665at 2787.111 kb on - strand, within ECD_02665at 2787.111 kb on - strand, within ECD_02665at 2787.111 kb on - strand, within ECD_02665at 2787.112 kb on + strand, within ECD_02665at 2787.112 kb on + strand, within ECD_02665at 2787.112 kb on + strand, within ECD_02665at 2787.113 kb on - strand, within ECD_02665at 2787.151 kb on + strand, within ECD_02665at 2787.152 kb on - strand, within ECD_02665at 2787.152 kb on - strand, within ECD_02665at 2787.217 kb on - strandat 2787.217 kb on - strandat 2787.315 kb on - strandat 2787.315 kb on - strandat 2787.323 kb on + strandat 2787.324 kb on - strandat 2787.324 kb on - strandat 2787.331 kb on - strandat 2787.331 kb on - strandat 2787.383 kb on - strandat 2787.405 kb on + strandat 2787.405 kb on + strandat 2787.420 kb on - strandat 2787.536 kb on + strandat 2787.537 kb on - strandat 2787.576 kb on + strandat 2787.576 kb on + strandat 2787.576 kb on + strandat 2787.576 kb on + strandat 2787.577 kb on - strandat 2787.578 kb on + strandat 2787.578 kb on + strandat 2787.578 kb on + strandat 2787.653 kb on + strandat 2787.653 kb on + strandat 2787.703 kb on + strand, within ECD_02666at 2787.703 kb on + strand, within ECD_02666at 2787.703 kb on + strand, within ECD_02666at 2787.708 kb on + strand, within ECD_02666at 2787.708 kb on + strand, within ECD_02666at 2787.765 kb on + strand, within ECD_02666at 2787.765 kb on + strand, within ECD_02666at 2787.766 kb on - strand, within ECD_02666at 2787.777 kb on - strand, within ECD_02666at 2787.778 kb on + strand, within ECD_02666at 2787.778 kb on + strand, within ECD_02666at 2787.778 kb on + strand, within ECD_02666at 2787.778 kb on + strand, within ECD_02666at 2787.778 kb on + strand, within ECD_02666at 2787.778 kb on + strand, within ECD_02666at 2787.778 kb on + strand, within ECD_02666at 2787.778 kb on + strand, within ECD_02666at 2787.778 kb on + strand, within ECD_02666at 2787.778 kb on + strand, within ECD_02666at 2787.778 kb on + strand, within ECD_02666at 2787.779 kb on - strand, within ECD_02666at 2787.842 kb on + strand, within ECD_02666at 2787.843 kb on - strand, within ECD_02666at 2787.843 kb on - strand, within ECD_02666at 2787.845 kb on + strand, within ECD_02666at 2787.846 kb on - strand, within ECD_02666at 2787.896 kb on + strand, within ECD_02666at 2787.897 kb on - strand, within ECD_02666at 2787.897 kb on - strand, within ECD_02666at 2787.924 kb on - strand, within ECD_02666at 2787.960 kb on + strand, within ECD_02666at 2788.030 kb on + strand, within ECD_02666at 2788.031 kb on - strand, within ECD_02666at 2788.166 kb on + strand, within ECD_02666at 2788.166 kb on + strand, within ECD_02666at 2788.167 kb on - strand, within ECD_02666at 2788.181 kb on + strand, within ECD_02666at 2788.248 kb on + strand, within ECD_02666at 2788.248 kb on + strand, within ECD_02666at 2788.248 kb on + strand, within ECD_02666at 2788.248 kb on + strand, within ECD_02666at 2788.248 kb on + strand, within ECD_02666at 2788.248 kb on + strand, within ECD_02666at 2788.321 kb on + strand, within ECD_02666at 2788.321 kb on + strand, within ECD_02666at 2788.321 kb on + strand, within ECD_02666at 2788.329 kb on + strand, within ECD_02666at 2788.481 kb on + strand, within ECD_02666at 2788.481 kb on + strand, within ECD_02666at 2788.481 kb on + strand, within ECD_02666at 2788.538 kb on + strand, within ECD_02666at 2788.538 kb on + strand, within ECD_02666at 2788.559 kb on + strand, within ECD_02666at 2788.578 kb on + strand, within ECD_02666at 2788.702 kb on + strand, within ECD_02666at 2788.734 kb on - strandat 2788.806 kb on + strandat 2788.806 kb on + strandat 2788.806 kb on + strandat 2788.806 kb on + strandat 2788.806 kb on + strandat 2788.807 kb on - strandat 2788.812 kb on + strandat 2788.813 kb on - strandat 2788.910 kb on + strandat 2788.910 kb on + strandat 2788.910 kb on + strandat 2788.911 kb on - strandat 2788.911 kb on - strandat 2788.911 kb on - strandat 2788.916 kb on + strandat 2788.916 kb on + strandat 2788.917 kb on - strandat 2788.917 kb on - strandat 2788.929 kb on + strandat 2788.929 kb on + strandat 2788.929 kb on + strandat 2788.929 kb on + strandat 2788.929 kb on + strandat 2788.929 kb on + strandat 2788.929 kb on + strandat 2788.929 kb on + strandat 2788.929 kb on + strandat 2788.930 kb on - strandat 2788.930 kb on - strandat 2788.930 kb on - strandat 2788.962 kb on + strandat 2788.963 kb on - strandat 2788.984 kb on + strandat 2788.984 kb on + strandat 2788.984 kb on + strandat 2788.984 kb on + strandat 2788.984 kb on + strandat 2788.984 kb on + strandat 2788.984 kb on + strandat 2788.985 kb on - strandat 2788.985 kb on - strandat 2788.985 kb on - strandat 2788.987 kb on + strandat 2788.987 kb on + strandat 2788.988 kb on - strandat 2788.989 kb on + strandat 2788.989 kb on + strandat 2788.990 kb on - strandat 2788.990 kb on - strandat 2788.990 kb on - strandat 2789.003 kb on + strandat 2789.042 kb on + strandat 2789.043 kb on - strandat 2789.043 kb on - strandat 2789.043 kb on - strandat 2789.045 kb on - strandat 2789.124 kb on + strand, within ECD_02667at 2789.124 kb on + strand, within ECD_02667at 2789.124 kb on + strand, within ECD_02667at 2789.124 kb on + strand, within ECD_02667at 2789.124 kb on + strand, within ECD_02667at 2789.124 kb on + strand, within ECD_02667at 2789.124 kb on + strand, within ECD_02667at 2789.124 kb on + strand, within ECD_02667at 2789.124 kb on + strand, within ECD_02667at 2789.125 kb on - strand, within ECD_02667at 2789.128 kb on + strand, within ECD_02667at 2789.128 kb on + strand, within ECD_02667at 2789.128 kb on + strand, within ECD_02667at 2789.129 kb on - strand, within ECD_02667at 2789.145 kb on + strand, within ECD_02667at 2789.145 kb on + strand, within ECD_02667at 2789.146 kb on - strand, within ECD_02667at 2789.146 kb on - strand, within ECD_02667at 2789.146 kb on - strand, within ECD_02667at 2789.146 kb on - strand, within ECD_02667at 2789.146 kb on - strand, within ECD_02667at 2789.184 kb on + strand, within ECD_02667at 2789.184 kb on + strand, within ECD_02667at 2789.185 kb on - strand, within ECD_02667at 2789.185 kb on - strand, within ECD_02667at 2789.185 kb on - strand, within ECD_02667at 2789.185 kb on - strand, within ECD_02667at 2789.185 kb on - strand, within ECD_02667at 2789.187 kb on + strand, within ECD_02667at 2789.187 kb on + strand, within ECD_02667at 2789.187 kb on + strand, within ECD_02667at 2789.313 kb on - strand, within ECD_02667at 2789.453 kb on - strand, within ECD_02667at 2789.529 kb on + strand, within ECD_02667at 2789.531 kb on + strand, within ECD_02667at 2789.531 kb on + strand, within ECD_02667at 2789.572 kb on - strand, within ECD_02667at 2789.607 kb on + strand, within ECD_02667at 2789.756 kb on - strand, within ECD_02667at 2789.796 kb on - strand, within ECD_02667

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Per-strain Table

Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI
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2,786,587 + ECD_02665 0.44 +0.9
2,786,588 - ECD_02665 0.44 -1.2
2,786,588 - ECD_02665 0.44 -0.6
2,786,588 - ECD_02665 0.44 +0.1
2,786,588 - ECD_02665 0.44 -3.0
2,786,588 - ECD_02665 0.44 +1.9
2,786,588 - ECD_02665 0.44 -2.5
2,786,588 - ECD_02665 0.44 -1.2
2,786,588 - ECD_02665 0.44 -1.7
2,786,588 - ECD_02665 0.44 -2.9
2,786,588 - ECD_02665 0.44 +0.6
2,786,598 - ECD_02665 0.45 +0.9
2,786,598 - ECD_02665 0.45 -0.8
2,786,598 - ECD_02665 0.45 +0.9
2,786,637 + ECD_02665 0.48 -1.9
2,786,637 + ECD_02665 0.48 -2.8
2,786,638 - ECD_02665 0.48 -2.3
2,786,638 - ECD_02665 0.48 +2.1
2,786,672 - ECD_02665 0.51 +0.3
2,786,720 + ECD_02665 0.54 +0.9
2,786,721 - ECD_02665 0.55 -0.2
2,786,721 - ECD_02665 0.55 -2.2
2,786,721 - ECD_02665 0.55 -1.5
2,786,721 - ECD_02665 0.55 -1.5
2,786,809 + ECD_02665 0.62 -1.3
2,786,809 + ECD_02665 0.62 -0.1
2,786,810 - ECD_02665 0.62 +0.5
2,786,889 - ECD_02665 0.68 -3.2
2,786,941 - ECD_02665 0.72 -0.1
2,786,958 + ECD_02665 0.73 +0.9
2,787,058 - ECD_02665 0.81 -1.0
2,787,058 - ECD_02665 0.81 -1.4
2,787,092 + ECD_02665 0.84 -2.0
2,787,093 - ECD_02665 0.84 -0.7
2,787,111 - ECD_02665 0.86 -2.1
2,787,111 - ECD_02665 0.86 -1.1
2,787,111 - ECD_02665 0.86 +0.5
2,787,111 - ECD_02665 0.86 +2.1
2,787,112 + ECD_02665 0.86 -2.6
2,787,112 + ECD_02665 0.86 +0.7
2,787,112 + ECD_02665 0.86 -3.9
2,787,113 - ECD_02665 0.86 +0.6
2,787,151 + ECD_02665 0.89 -1.0
2,787,152 - ECD_02665 0.89 -1.7
2,787,152 - ECD_02665 0.89 -1.3
2,787,217 - +1.1
2,787,217 - -2.3
2,787,315 - -0.2
2,787,315 - -1.6
2,787,323 + +1.6
2,787,324 - -1.1
2,787,324 - -0.8
2,787,331 - -0.5
2,787,331 - +3.0
2,787,383 - -0.6
2,787,405 + +0.6
2,787,405 + +0.6
2,787,420 - -0.1
2,787,536 + +1.3
2,787,537 - -0.2
2,787,576 + +1.1
2,787,576 + -0.0
2,787,576 + +3.1
2,787,576 + -1.7
2,787,577 - -3.1
2,787,578 + -0.3
2,787,578 + +2.0
2,787,578 + -2.7
2,787,653 + +0.2
2,787,653 + -2.9
2,787,703 + ECD_02666 0.14 +1.2
2,787,703 + ECD_02666 0.14 -1.7
2,787,703 + ECD_02666 0.14 +0.2
2,787,708 + ECD_02666 0.14 +0.4
2,787,708 + ECD_02666 0.14 +2.7
2,787,765 + ECD_02666 0.18 -1.9
2,787,765 + ECD_02666 0.18 -0.9
2,787,766 - ECD_02666 0.18 -2.1
2,787,777 - ECD_02666 0.19 +0.5
2,787,778 + ECD_02666 0.19 +1.3
2,787,778 + ECD_02666 0.19 +0.6
2,787,778 + ECD_02666 0.19 +2.8
2,787,778 + ECD_02666 0.19 +1.8
2,787,778 + ECD_02666 0.19 +0.7
2,787,778 + ECD_02666 0.19 +0.3
2,787,778 + ECD_02666 0.19 +1.6
2,787,778 + ECD_02666 0.19 +1.4
2,787,778 + ECD_02666 0.19 -0.0
2,787,778 + ECD_02666 0.19 +0.7
2,787,778 + ECD_02666 0.19 +1.2
2,787,779 - ECD_02666 0.19 -1.7
2,787,842 + ECD_02666 0.24 +1.4
2,787,843 - ECD_02666 0.24 -3.1
2,787,843 - ECD_02666 0.24 -1.5
2,787,845 + ECD_02666 0.24 +0.1
2,787,846 - ECD_02666 0.24 -0.9
2,787,896 + ECD_02666 0.28 -2.3
2,787,897 - ECD_02666 0.28 -1.2
2,787,897 - ECD_02666 0.28 -1.0
2,787,924 - ECD_02666 0.30 -1.3
2,787,960 + ECD_02666 0.33 +0.9
2,788,030 + ECD_02666 0.38 +0.9
2,788,031 - ECD_02666 0.38 -1.4
2,788,166 + ECD_02666 0.48 -1.9
2,788,166 + ECD_02666 0.48 +1.4
2,788,167 - ECD_02666 0.48 -1.1
2,788,181 + ECD_02666 0.49 -1.0
2,788,248 + ECD_02666 0.55 -1.7
2,788,248 + ECD_02666 0.55 -2.4
2,788,248 + ECD_02666 0.55 +1.3
2,788,248 + ECD_02666 0.55 +0.4
2,788,248 + ECD_02666 0.55 +1.0
2,788,248 + ECD_02666 0.55 -1.0
2,788,321 + ECD_02666 0.60 -2.0
2,788,321 + ECD_02666 0.60 +1.8
2,788,321 + ECD_02666 0.60 -1.0
2,788,329 + ECD_02666 0.61 +2.4
2,788,481 + ECD_02666 0.72 -1.9
2,788,481 + ECD_02666 0.72 -0.1
2,788,481 + ECD_02666 0.72 -2.1
2,788,538 + ECD_02666 0.76 +1.8
2,788,538 + ECD_02666 0.76 +1.6
2,788,559 + ECD_02666 0.78 -0.6
2,788,578 + ECD_02666 0.79 -0.9
2,788,702 + ECD_02666 0.89 +0.4
2,788,734 - +2.9
2,788,806 + -1.1
2,788,806 + +0.3
2,788,806 + -2.8
2,788,806 + -2.7
2,788,806 + +1.3
2,788,807 - -1.8
2,788,812 + +0.6
2,788,813 - +1.6
2,788,910 + +1.2
2,788,910 + +1.0
2,788,910 + -1.5
2,788,911 - +1.2
2,788,911 - -2.6
2,788,911 - +0.8
2,788,916 + -1.5
2,788,916 + -0.7
2,788,917 - -1.3
2,788,917 - -0.8
2,788,929 + +1.4
2,788,929 + +2.7
2,788,929 + -0.3
2,788,929 + -1.6
2,788,929 + +1.8
2,788,929 + +1.0
2,788,929 + -1.6
2,788,929 + +3.6
2,788,929 + +1.0
2,788,930 - -1.8
2,788,930 - +1.2
2,788,930 - -2.4
2,788,962 + -2.7
2,788,963 - +0.2
2,788,984 + -2.2
2,788,984 + -1.6
2,788,984 + -2.0
2,788,984 + -1.5
2,788,984 + -0.3
2,788,984 + +2.3
2,788,984 + -1.9
2,788,985 - -1.1
2,788,985 - -2.3
2,788,985 - -3.3
2,788,987 + -2.5
2,788,987 + -1.6
2,788,988 - -1.3
2,788,989 + -2.1
2,788,989 + -2.1
2,788,990 - -1.7
2,788,990 - -0.4
2,788,990 - -1.4
2,789,003 + -1.7
2,789,042 + -2.4
2,789,043 - -1.4
2,789,043 - -0.9
2,789,043 - -1.2
2,789,045 - -2.5
2,789,124 + ECD_02667 0.11 -2.5
2,789,124 + ECD_02667 0.11 -2.3
2,789,124 + ECD_02667 0.11 +1.2
2,789,124 + ECD_02667 0.11 -1.5
2,789,124 + ECD_02667 0.11 -2.6
2,789,124 + ECD_02667 0.11 +0.1
2,789,124 + ECD_02667 0.11 -2.0
2,789,124 + ECD_02667 0.11 -0.3
2,789,124 + ECD_02667 0.11 -2.5
2,789,125 - ECD_02667 0.11 -1.6
2,789,128 + ECD_02667 0.12 -0.8
2,789,128 + ECD_02667 0.12 -0.9
2,789,128 + ECD_02667 0.12 -2.1
2,789,129 - ECD_02667 0.12 -0.3
2,789,145 + ECD_02667 0.13 -2.2
2,789,145 + ECD_02667 0.13 -2.2
2,789,146 - ECD_02667 0.13 -1.5
2,789,146 - ECD_02667 0.13 -2.5
2,789,146 - ECD_02667 0.13 -0.9
2,789,146 - ECD_02667 0.13 -1.6
2,789,146 - ECD_02667 0.13 -4.6
2,789,184 + ECD_02667 0.15 -1.1
2,789,184 + ECD_02667 0.15 -0.1
2,789,185 - ECD_02667 0.15 -1.8
2,789,185 - ECD_02667 0.15 -2.7
2,789,185 - ECD_02667 0.15 -1.7
2,789,185 - ECD_02667 0.15 -0.5
2,789,185 - ECD_02667 0.15 -1.6
2,789,187 + ECD_02667 0.15 -1.3
2,789,187 + ECD_02667 0.15 -2.8
2,789,187 + ECD_02667 0.15 -0.7
2,789,313 - ECD_02667 0.22 -1.3
2,789,453 - ECD_02667 0.29 -0.3
2,789,529 + ECD_02667 0.34 -1.7
2,789,531 + ECD_02667 0.34 -2.1
2,789,531 + ECD_02667 0.34 -1.1
2,789,572 - ECD_02667 0.36 -2.7
2,789,607 + ECD_02667 0.38 -0.7
2,789,756 - ECD_02667 0.46 -2.2
2,789,796 - ECD_02667 0.48 -2.5

Or see this region's nucleotide sequence