Strain Fitness in Escherichia coli BL21 around ECD_02646

Experiment: P2_phage_0.5625_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02644 and ECD_02646 are separated by 256 nucleotidesECD_02646 and ECD_02647 overlap by 82 nucleotidesECD_02647 and ECD_02648 are separated by 627 nucleotides ECD_02644: ECD_02644 - L-1,2-propanediol oxidoreductase, at 2,764,455 to 2,765,606 _02644 ECD_02646: ECD_02646 - IS1 protein InsB, at 2,765,863 to 2,766,366 _02646 ECD_02647: ECD_02647 - IS1 protein InsA, at 2,766,285 to 2,766,560 _02647 ECD_02648: ECD_02648 - L-fuculose phosphate aldolase, at 2,767,188 to 2,768,132 _02648 Position (kb) 2765 2766 2767Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 2764.864 kb on + strand, within ECD_02644at 2764.864 kb on + strand, within ECD_02644at 2764.865 kb on - strand, within ECD_02644at 2764.865 kb on - strand, within ECD_02644at 2764.898 kb on + strand, within ECD_02644at 2764.949 kb on + strand, within ECD_02644at 2764.950 kb on - strand, within ECD_02644at 2764.989 kb on - strand, within ECD_02644at 2764.991 kb on + strand, within ECD_02644at 2764.991 kb on + strand, within ECD_02644at 2764.991 kb on + strand, within ECD_02644at 2764.992 kb on - strand, within ECD_02644at 2764.992 kb on - strand, within ECD_02644at 2764.992 kb on - strand, within ECD_02644at 2764.992 kb on - strand, within ECD_02644at 2764.992 kb on - strand, within ECD_02644at 2764.992 kb on - strand, within ECD_02644at 2764.992 kb on - strand, within ECD_02644at 2764.992 kb on - strand, within ECD_02644at 2764.992 kb on - strand, within ECD_02644at 2764.993 kb on + strand, within ECD_02644at 2764.994 kb on - strand, within ECD_02644at 2764.994 kb on - strand, within ECD_02644at 2764.994 kb on - strand, within ECD_02644at 2764.994 kb on - strand, within ECD_02644at 2764.994 kb on - strand, within ECD_02644at 2764.994 kb on - strand, within ECD_02644at 2765.004 kb on - strand, within ECD_02644at 2765.004 kb on - strand, within ECD_02644at 2765.054 kb on + strand, within ECD_02644at 2765.079 kb on - strand, within ECD_02644at 2765.152 kb on + strand, within ECD_02644at 2765.152 kb on + strand, within ECD_02644at 2765.153 kb on - strand, within ECD_02644at 2765.153 kb on - strand, within ECD_02644at 2765.153 kb on - strand, within ECD_02644at 2765.157 kb on - strand, within ECD_02644at 2765.208 kb on + strand, within ECD_02644at 2765.294 kb on + strand, within ECD_02644at 2765.295 kb on - strand, within ECD_02644at 2765.295 kb on - strand, within ECD_02644at 2765.301 kb on - strand, within ECD_02644at 2765.301 kb on - strand, within ECD_02644at 2765.359 kb on - strand, within ECD_02644at 2765.384 kb on + strand, within ECD_02644at 2765.384 kb on + strand, within ECD_02644at 2765.384 kb on + strand, within ECD_02644at 2765.384 kb on + strand, within ECD_02644at 2765.385 kb on - strand, within ECD_02644at 2765.385 kb on - strand, within ECD_02644at 2765.385 kb on - strand, within ECD_02644at 2765.385 kb on - strand, within ECD_02644at 2765.385 kb on - strand, within ECD_02644at 2765.385 kb on - strand, within ECD_02644at 2765.404 kb on - strand, within ECD_02644at 2765.414 kb on - strand, within ECD_02644at 2765.448 kb on - strand, within ECD_02644at 2765.490 kb on - strand, within ECD_02644at 2765.653 kb on + strandat 2765.654 kb on - strandat 2765.654 kb on - strandat 2765.676 kb on + strandat 2765.738 kb on - strandat 2765.824 kb on - strandat 2765.879 kb on - strandat 2766.674 kb on - strandat 2766.690 kb on - strandat 2766.690 kb on - strandat 2766.718 kb on + strandat 2766.718 kb on + strandat 2766.719 kb on - strandat 2766.719 kb on - strandat 2766.897 kb on - strandat 2766.897 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI
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2,764,864 + ECD_02644 0.36 -0.5
2,764,864 + ECD_02644 0.36 -2.8
2,764,865 - ECD_02644 0.36 -1.0
2,764,865 - ECD_02644 0.36 +0.1
2,764,898 + ECD_02644 0.38 -1.5
2,764,949 + ECD_02644 0.43 -1.3
2,764,950 - ECD_02644 0.43 +0.1
2,764,989 - ECD_02644 0.46 -0.7
2,764,991 + ECD_02644 0.47 -0.9
2,764,991 + ECD_02644 0.47 -0.1
2,764,991 + ECD_02644 0.47 +0.3
2,764,992 - ECD_02644 0.47 +2.0
2,764,992 - ECD_02644 0.47 +1.0
2,764,992 - ECD_02644 0.47 +1.8
2,764,992 - ECD_02644 0.47 -0.8
2,764,992 - ECD_02644 0.47 -2.2
2,764,992 - ECD_02644 0.47 -0.5
2,764,992 - ECD_02644 0.47 -0.3
2,764,992 - ECD_02644 0.47 +1.8
2,764,992 - ECD_02644 0.47 +1.4
2,764,993 + ECD_02644 0.47 -0.8
2,764,994 - ECD_02644 0.47 -2.1
2,764,994 - ECD_02644 0.47 -1.4
2,764,994 - ECD_02644 0.47 +1.6
2,764,994 - ECD_02644 0.47 -1.8
2,764,994 - ECD_02644 0.47 +1.3
2,764,994 - ECD_02644 0.47 -0.9
2,765,004 - ECD_02644 0.48 -2.5
2,765,004 - ECD_02644 0.48 +1.0
2,765,054 + ECD_02644 0.52 +0.4
2,765,079 - ECD_02644 0.54 +2.2
2,765,152 + ECD_02644 0.61 +0.7
2,765,152 + ECD_02644 0.61 -0.1
2,765,153 - ECD_02644 0.61 +0.0
2,765,153 - ECD_02644 0.61 +2.2
2,765,153 - ECD_02644 0.61 +2.1
2,765,157 - ECD_02644 0.61 +1.8
2,765,208 + ECD_02644 0.65 -1.8
2,765,294 + ECD_02644 0.73 -1.0
2,765,295 - ECD_02644 0.73 -1.4
2,765,295 - ECD_02644 0.73 -1.3
2,765,301 - ECD_02644 0.73 -1.4
2,765,301 - ECD_02644 0.73 -1.4
2,765,359 - ECD_02644 0.78 -0.9
2,765,384 + ECD_02644 0.81 -0.8
2,765,384 + ECD_02644 0.81 -1.3
2,765,384 + ECD_02644 0.81 -2.1
2,765,384 + ECD_02644 0.81 -0.6
2,765,385 - ECD_02644 0.81 -0.4
2,765,385 - ECD_02644 0.81 -1.5
2,765,385 - ECD_02644 0.81 -2.1
2,765,385 - ECD_02644 0.81 -0.5
2,765,385 - ECD_02644 0.81 +1.2
2,765,385 - ECD_02644 0.81 +1.6
2,765,404 - ECD_02644 0.82 -1.4
2,765,414 - ECD_02644 0.83 -0.2
2,765,448 - ECD_02644 0.86 -2.3
2,765,490 - ECD_02644 0.90 -1.2
2,765,653 + -1.7
2,765,654 - -2.0
2,765,654 - -0.0
2,765,676 + -2.7
2,765,738 - -0.2
2,765,824 - -2.2
2,765,879 - -1.5
2,766,674 - -1.9
2,766,690 - +1.1
2,766,690 - +0.5
2,766,718 + +3.9
2,766,718 + -0.9
2,766,719 - +1.3
2,766,719 - -0.5
2,766,897 - -1.9
2,766,897 - +1.5

Or see this region's nucleotide sequence