Experiment: P2_phage_0.5625_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02475 and ECD_02476 are separated by 206 nucleotides ECD_02476 and ECD_02477 are separated by 68 nucleotides ECD_02477 and ECD_02478 are separated by 31 nucleotides
ECD_02475: ECD_02475 - putative methyltransferase, at 2,584,091 to 2,585,128
_02475
ECD_02476: ECD_02476 - thioredoxin 2, at 2,585,335 to 2,585,754
_02476
ECD_02477: ECD_02477 - DTW domain protein, at 2,585,823 to 2,586,521
_02477
ECD_02478: ECD_02478 - protein lysine acetyltransferase, at 2,586,553 to 2,589,213
_02478
Position (kb)
2585
2586 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2584.511 kb on - strand, within ECD_02475 at 2584.669 kb on - strand, within ECD_02475 at 2584.669 kb on - strand, within ECD_02475 at 2584.669 kb on - strand, within ECD_02475 at 2585.050 kb on + strand at 2585.051 kb on - strand at 2585.083 kb on - strand at 2585.083 kb on - strand at 2585.083 kb on - strand at 2585.083 kb on - strand at 2585.215 kb on - strand at 2585.220 kb on - strand at 2585.220 kb on - strand at 2585.220 kb on - strand at 2585.224 kb on - strand at 2585.224 kb on - strand at 2585.267 kb on + strand at 2585.272 kb on - strand at 2585.272 kb on - strand at 2585.276 kb on + strand at 2585.276 kb on + strand at 2585.330 kb on + strand at 2585.330 kb on + strand at 2585.331 kb on - strand at 2585.334 kb on + strand at 2585.335 kb on - strand at 2585.335 kb on - strand at 2585.448 kb on + strand, within ECD_02476 at 2585.492 kb on + strand, within ECD_02476 at 2585.493 kb on - strand, within ECD_02476 at 2585.649 kb on + strand, within ECD_02476 at 2585.649 kb on + strand, within ECD_02476 at 2585.653 kb on - strand, within ECD_02476 at 2585.752 kb on + strand at 2585.822 kb on + strand at 2585.960 kb on + strand, within ECD_02477 at 2586.162 kb on + strand, within ECD_02477 at 2586.221 kb on + strand, within ECD_02477 at 2586.459 kb on + strand at 2586.508 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI remove 2,584,511 - ECD_02475 0.40 -1.5 2,584,669 - ECD_02475 0.56 +0.8 2,584,669 - ECD_02475 0.56 -1.6 2,584,669 - ECD_02475 0.56 -0.5 2,585,050 + +0.2 2,585,051 - -0.3 2,585,083 - +2.9 2,585,083 - +1.2 2,585,083 - +1.0 2,585,083 - -2.7 2,585,215 - +2.3 2,585,220 - -2.0 2,585,220 - -1.5 2,585,220 - -0.7 2,585,224 - +1.0 2,585,224 - +1.4 2,585,267 + +3.1 2,585,272 - +0.2 2,585,272 - +0.3 2,585,276 + -2.7 2,585,276 + +1.6 2,585,330 + -0.4 2,585,330 + +1.0 2,585,331 - +2.0 2,585,334 + +0.3 2,585,335 - +1.7 2,585,335 - +2.1 2,585,448 + ECD_02476 0.27 -1.2 2,585,492 + ECD_02476 0.37 +2.4 2,585,493 - ECD_02476 0.38 -1.5 2,585,649 + ECD_02476 0.75 -0.9 2,585,649 + ECD_02476 0.75 +2.7 2,585,653 - ECD_02476 0.76 -0.7 2,585,752 + -1.5 2,585,822 + -1.1 2,585,960 + ECD_02477 0.20 -0.6 2,586,162 + ECD_02477 0.48 +1.4 2,586,221 + ECD_02477 0.57 +1.8 2,586,459 + -0.6 2,586,508 + -0.3
Or see this region's nucleotide sequence