Experiment: P2_phage_0.5625_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02442 and ECD_02443 are separated by 197 nucleotides ECD_02443 and ECD_02444 are separated by 327 nucleotides
ECD_02442: ECD_02442 - putative DNA-binding transcriptional regulator, at 2,548,668 to 2,549,861
_02442
ECD_02443: ECD_02443 - serine hydroxymethyltransferase, at 2,550,059 to 2,551,312
_02443
ECD_02444: ECD_02444 - fused nitric oxide dioxygenase/dihydropteridine reductase 2, at 2,551,640 to 2,552,830
_02444
Position (kb)
2550
2551
2552 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2549.066 kb on + strand, within ECD_02442 at 2549.183 kb on - strand, within ECD_02442 at 2549.187 kb on + strand, within ECD_02442 at 2549.188 kb on - strand, within ECD_02442 at 2549.364 kb on + strand, within ECD_02442 at 2549.670 kb on + strand, within ECD_02442 at 2549.708 kb on + strand, within ECD_02442 at 2549.708 kb on + strand, within ECD_02442 at 2549.708 kb on + strand, within ECD_02442 at 2549.709 kb on - strand, within ECD_02442 at 2549.711 kb on + strand, within ECD_02442 at 2549.794 kb on + strand at 2549.794 kb on + strand at 2549.826 kb on + strand at 2549.832 kb on + strand at 2549.833 kb on - strand at 2549.964 kb on + strand at 2550.067 kb on - strand at 2550.417 kb on - strand, within ECD_02443 at 2550.644 kb on - strand, within ECD_02443 at 2550.713 kb on - strand, within ECD_02443 at 2550.727 kb on - strand, within ECD_02443 at 2550.895 kb on - strand, within ECD_02443 at 2550.971 kb on - strand, within ECD_02443 at 2551.123 kb on - strand, within ECD_02443 at 2551.150 kb on - strand, within ECD_02443 at 2551.259 kb on - strand at 2551.568 kb on + strand at 2551.725 kb on - strand at 2551.732 kb on + strand at 2551.732 kb on + strand at 2551.820 kb on - strand, within ECD_02444 at 2551.922 kb on + strand, within ECD_02444 at 2552.009 kb on + strand, within ECD_02444 at 2552.016 kb on + strand, within ECD_02444 at 2552.016 kb on + strand, within ECD_02444 at 2552.016 kb on + strand, within ECD_02444 at 2552.028 kb on + strand, within ECD_02444 at 2552.028 kb on + strand, within ECD_02444 at 2552.033 kb on - strand, within ECD_02444 at 2552.054 kb on + strand, within ECD_02444 at 2552.293 kb on + strand, within ECD_02444
Per-strain Table
Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI remove 2,549,066 + ECD_02442 0.33 -0.6 2,549,183 - ECD_02442 0.43 -1.0 2,549,187 + ECD_02442 0.43 +2.1 2,549,188 - ECD_02442 0.44 -1.3 2,549,364 + ECD_02442 0.58 +0.1 2,549,670 + ECD_02442 0.84 -1.2 2,549,708 + ECD_02442 0.87 -1.3 2,549,708 + ECD_02442 0.87 -0.7 2,549,708 + ECD_02442 0.87 -2.1 2,549,709 - ECD_02442 0.87 +2.1 2,549,711 + ECD_02442 0.87 -0.2 2,549,794 + +3.5 2,549,794 + +0.1 2,549,826 + -2.2 2,549,832 + -1.1 2,549,833 - -0.8 2,549,964 + +1.6 2,550,067 - +2.7 2,550,417 - ECD_02443 0.29 -0.6 2,550,644 - ECD_02443 0.47 -1.0 2,550,713 - ECD_02443 0.52 -1.0 2,550,727 - ECD_02443 0.53 -2.0 2,550,895 - ECD_02443 0.67 -1.3 2,550,971 - ECD_02443 0.73 -2.6 2,551,123 - ECD_02443 0.85 -2.3 2,551,150 - ECD_02443 0.87 -3.4 2,551,259 - -2.3 2,551,568 + +0.8 2,551,725 - -2.3 2,551,732 + +0.3 2,551,732 + -0.2 2,551,820 - ECD_02444 0.15 +0.9 2,551,922 + ECD_02444 0.24 -1.1 2,552,009 + ECD_02444 0.31 -1.5 2,552,016 + ECD_02444 0.32 +0.8 2,552,016 + ECD_02444 0.32 +0.2 2,552,016 + ECD_02444 0.32 -0.7 2,552,028 + ECD_02444 0.33 +3.2 2,552,028 + ECD_02444 0.33 -2.0 2,552,033 - ECD_02444 0.33 -1.8 2,552,054 + ECD_02444 0.35 -1.2 2,552,293 + ECD_02444 0.55 -1.3
Or see this region's nucleotide sequence