Strain Fitness in Escherichia coli BL21 around ECD_02400

Experiment: P2_phage_0.5625_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02399 and ECD_02400 are separated by 68 nucleotidesECD_02400 and ECD_02401 are separated by 161 nucleotides ECD_02399: ECD_02399 - GMP synthetase (glutamine aminotransferase), at 2,495,438 to 2,497,015 _02399 ECD_02400: ECD_02400 - IMP dehydrogenase, at 2,497,084 to 2,498,550 _02400 ECD_02401: ECD_02401 - exonuclease VII, large subunit, at 2,498,712 to 2,500,082 _02401 Position (kb) 2497 2498 2499Strain fitness (log2 ratio) -3 -2 -1 0 1at 2496.167 kb on - strand, within ECD_02399at 2496.332 kb on - strand, within ECD_02399at 2496.490 kb on - strand, within ECD_02399at 2496.490 kb on - strand, within ECD_02399at 2496.669 kb on - strand, within ECD_02399at 2496.796 kb on - strand, within ECD_02399at 2496.830 kb on - strand, within ECD_02399at 2497.050 kb on - strandat 2497.120 kb on - strandat 2497.207 kb on - strandat 2497.207 kb on - strandat 2497.228 kb on - strandat 2497.472 kb on - strand, within ECD_02400at 2497.597 kb on - strand, within ECD_02400at 2497.636 kb on - strand, within ECD_02400at 2497.642 kb on - strand, within ECD_02400at 2497.753 kb on - strand, within ECD_02400at 2497.753 kb on - strand, within ECD_02400at 2497.781 kb on - strand, within ECD_02400at 2498.096 kb on + strand, within ECD_02400at 2498.096 kb on + strand, within ECD_02400at 2498.097 kb on - strand, within ECD_02400at 2498.097 kb on - strand, within ECD_02400at 2498.097 kb on - strand, within ECD_02400at 2498.546 kb on - strandat 2498.598 kb on + strandat 2498.716 kb on + strandat 2499.169 kb on + strand, within ECD_02401at 2499.169 kb on + strand, within ECD_02401at 2499.176 kb on + strand, within ECD_02401at 2499.310 kb on + strand, within ECD_02401

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Per-strain Table

Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI
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2,496,167 - ECD_02399 0.46 +0.2
2,496,332 - ECD_02399 0.57 -1.1
2,496,490 - ECD_02399 0.67 -0.3
2,496,490 - ECD_02399 0.67 +1.2
2,496,669 - ECD_02399 0.78 -1.4
2,496,796 - ECD_02399 0.86 +0.2
2,496,830 - ECD_02399 0.88 -1.2
2,497,050 - -3.1
2,497,120 - -1.2
2,497,207 - -2.1
2,497,207 - -3.4
2,497,228 - -2.0
2,497,472 - ECD_02400 0.26 -3.2
2,497,597 - ECD_02400 0.35 -0.8
2,497,636 - ECD_02400 0.38 -2.0
2,497,642 - ECD_02400 0.38 -2.1
2,497,753 - ECD_02400 0.46 -2.9
2,497,753 - ECD_02400 0.46 -0.4
2,497,781 - ECD_02400 0.48 -1.0
2,498,096 + ECD_02400 0.69 -0.3
2,498,096 + ECD_02400 0.69 -0.2
2,498,097 - ECD_02400 0.69 -1.2
2,498,097 - ECD_02400 0.69 -0.8
2,498,097 - ECD_02400 0.69 -2.0
2,498,546 - -1.3
2,498,598 + -1.2
2,498,716 + -0.8
2,499,169 + ECD_02401 0.33 -2.6
2,499,169 + ECD_02401 0.33 -3.3
2,499,176 + ECD_02401 0.34 -2.8
2,499,310 + ECD_02401 0.44 -1.9

Or see this region's nucleotide sequence