Experiment: P2_phage_0.5625_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02397 and ECD_02398 are separated by 15 nucleotides ECD_02398 and ECD_02399 are separated by 92 nucleotides ECD_02399 and ECD_02400 are separated by 68 nucleotides
ECD_02397: ECD_02397 - outer membrane integrity lipoprotein, at 2,494,272 to 2,494,790
_02397
ECD_02398: ECD_02398 - nalidixic acid resistance protein, putative periplasmic protein, at 2,494,806 to 2,495,345
_02398
ECD_02399: ECD_02399 - GMP synthetase (glutamine aminotransferase), at 2,495,438 to 2,497,015
_02399
ECD_02400: ECD_02400 - IMP dehydrogenase, at 2,497,084 to 2,498,550
_02400
Position (kb)
2495
2496
2497
2498 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2494.608 kb on - strand, within ECD_02397 at 2494.671 kb on + strand, within ECD_02397 at 2494.740 kb on + strand at 2494.791 kb on + strand at 2495.042 kb on + strand, within ECD_02398 at 2495.043 kb on - strand, within ECD_02398 at 2495.624 kb on - strand, within ECD_02399 at 2495.758 kb on - strand, within ECD_02399 at 2496.063 kb on - strand, within ECD_02399 at 2496.167 kb on - strand, within ECD_02399 at 2496.332 kb on - strand, within ECD_02399 at 2496.490 kb on - strand, within ECD_02399 at 2496.490 kb on - strand, within ECD_02399 at 2496.669 kb on - strand, within ECD_02399 at 2496.796 kb on - strand, within ECD_02399 at 2496.830 kb on - strand, within ECD_02399 at 2497.050 kb on - strand at 2497.120 kb on - strand at 2497.207 kb on - strand at 2497.207 kb on - strand at 2497.228 kb on - strand at 2497.472 kb on - strand, within ECD_02400 at 2497.597 kb on - strand, within ECD_02400 at 2497.636 kb on - strand, within ECD_02400 at 2497.642 kb on - strand, within ECD_02400 at 2497.753 kb on - strand, within ECD_02400 at 2497.753 kb on - strand, within ECD_02400 at 2497.781 kb on - strand, within ECD_02400
Per-strain Table
Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI remove 2,494,608 - ECD_02397 0.65 +1.9 2,494,671 + ECD_02397 0.77 -2.5 2,494,740 + +2.3 2,494,791 + -0.3 2,495,042 + ECD_02398 0.44 +1.0 2,495,043 - ECD_02398 0.44 +0.7 2,495,624 - ECD_02399 0.12 -1.4 2,495,758 - ECD_02399 0.20 -0.5 2,496,063 - ECD_02399 0.40 -0.6 2,496,167 - ECD_02399 0.46 +0.2 2,496,332 - ECD_02399 0.57 -1.1 2,496,490 - ECD_02399 0.67 -0.3 2,496,490 - ECD_02399 0.67 +1.2 2,496,669 - ECD_02399 0.78 -1.4 2,496,796 - ECD_02399 0.86 +0.2 2,496,830 - ECD_02399 0.88 -1.2 2,497,050 - -3.1 2,497,120 - -1.2 2,497,207 - -2.1 2,497,207 - -3.4 2,497,228 - -2.0 2,497,472 - ECD_02400 0.26 -3.2 2,497,597 - ECD_02400 0.35 -0.8 2,497,636 - ECD_02400 0.38 -2.0 2,497,642 - ECD_02400 0.38 -2.1 2,497,753 - ECD_02400 0.46 -2.9 2,497,753 - ECD_02400 0.46 -0.4 2,497,781 - ECD_02400 0.48 -1.0
Or see this region's nucleotide sequence