Experiment: P2_phage_0.5625_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02368 and ECD_02369 are separated by 212 nucleotides ECD_02369 and ECD_02370 are separated by 16 nucleotides
ECD_02368: ECD_02368 - phosphoribosylaminoimidazole-succinocarboxamide synthetase, at 2,461,394 to 2,462,107
_02368
ECD_02369: ECD_02369 - BamABCDE complex OM biogenesis lipoprotein, at 2,462,320 to 2,463,354
_02369
ECD_02370: ECD_02370 - dihydrodipicolinate synthase, at 2,463,371 to 2,464,249
_02370
Position (kb)
2462
2463
2464 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2461.335 kb on + strand at 2461.335 kb on + strand at 2461.335 kb on + strand at 2461.407 kb on - strand at 2461.944 kb on + strand, within ECD_02368 at 2462.078 kb on - strand at 2462.085 kb on + strand at 2462.086 kb on - strand at 2462.131 kb on + strand at 2462.315 kb on + strand at 2462.351 kb on - strand at 2462.448 kb on - strand, within ECD_02369 at 2462.516 kb on + strand, within ECD_02369 at 2462.516 kb on + strand, within ECD_02369 at 2462.517 kb on - strand, within ECD_02369 at 2462.743 kb on - strand, within ECD_02369 at 2462.743 kb on - strand, within ECD_02369 at 2462.970 kb on - strand, within ECD_02369 at 2463.013 kb on - strand, within ECD_02369 at 2463.234 kb on - strand, within ECD_02369 at 2463.262 kb on - strand at 2463.264 kb on - strand at 2463.280 kb on - strand at 2463.348 kb on - strand at 2463.348 kb on - strand at 2463.372 kb on + strand at 2464.335 kb on + strand at 2464.335 kb on + strand at 2464.336 kb on - strand at 2464.336 kb on - strand at 2464.336 kb on - strand at 2464.336 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI remove 2,461,335 + -2.3 2,461,335 + -2.7 2,461,335 + -0.0 2,461,407 - -1.7 2,461,944 + ECD_02368 0.77 -2.5 2,462,078 - -2.3 2,462,085 + -1.7 2,462,086 - -1.3 2,462,131 + +0.0 2,462,315 + -1.9 2,462,351 - -0.0 2,462,448 - ECD_02369 0.12 +1.7 2,462,516 + ECD_02369 0.19 -0.6 2,462,516 + ECD_02369 0.19 -1.1 2,462,517 - ECD_02369 0.19 +1.1 2,462,743 - ECD_02369 0.41 +1.4 2,462,743 - ECD_02369 0.41 -1.7 2,462,970 - ECD_02369 0.63 -1.3 2,463,013 - ECD_02369 0.67 +0.8 2,463,234 - ECD_02369 0.88 +1.8 2,463,262 - -0.7 2,463,264 - +1.5 2,463,280 - +1.6 2,463,348 - -1.6 2,463,348 - +2.8 2,463,372 + -1.0 2,464,335 + -2.5 2,464,335 + +1.9 2,464,336 - +3.3 2,464,336 - -0.4 2,464,336 - -0.4 2,464,336 - +1.9
Or see this region's nucleotide sequence