Strain Fitness in Escherichia coli BL21 around ECD_02038

Experiment: P2_phage_0.5625_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02036 and ECD_02037 are separated by 94 nucleotidesECD_02037 and ECD_02038 are separated by 336 nucleotidesECD_02038 and ECD_02039 overlap by 53 nucleotidesECD_02039 and ECD_02040 are separated by 156 nucleotidesECD_02040 and ECD_02041 overlap by 82 nucleotides ECD_02036: ECD_02036 - hypothetical protein, at 2,085,105 to 2,085,368 _02036 ECD_02037: ECD_02037 - hypothetical protein, at 2,085,463 to 2,085,714 _02037 ECD_02038: ECD_02038 - hypothetical protein, at 2,086,051 to 2,086,449 _02038 ECD_02039: ECD_02039 - hypothetical protein, at 2,086,397 to 2,086,588 _02039 ECD_02040: ECD_02040 - IS1 protein InsB, at 2,086,745 to 2,087,248 _02040 ECD_02041: ECD_02041 - IS1 protein InsA, at 2,087,167 to 2,087,442 _02041 Position (kb) 2086 2087Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2085.255 kb on - strand, within ECD_02036at 2085.667 kb on + strand, within ECD_02037at 2085.716 kb on + strandat 2085.793 kb on - strandat 2085.933 kb on + strandat 2086.016 kb on - strandat 2086.069 kb on + strandat 2086.076 kb on + strandat 2086.248 kb on - strand, within ECD_02038at 2086.534 kb on - strand, within ECD_02039at 2086.584 kb on - strandat 2086.613 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI
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2,085,255 - ECD_02036 0.57 -2.2
2,085,667 + ECD_02037 0.81 +3.3
2,085,716 + +0.3
2,085,793 - -1.5
2,085,933 + -1.2
2,086,016 - -1.6
2,086,069 + -0.2
2,086,076 + -1.2
2,086,248 - ECD_02038 0.49 -2.4
2,086,534 - ECD_02039 0.71 -1.8
2,086,584 - -1.5
2,086,613 - -0.8

Or see this region's nucleotide sequence