Strain Fitness in Escherichia coli BL21 around ECD_01856

Experiment: P2_phage_0.5625_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01854 and ECD_01855 are separated by 2 nucleotidesECD_01855 and ECD_01856 are separated by 18 nucleotidesECD_01856 and ECD_01857 are separated by 45 nucleotides ECD_01854: ECD_01854 - fused chemotaxis regulator: protein-glutamate methylesterase in two-component regulatory system with CheA, at 1,913,370 to 1,914,419 _01854 ECD_01855: ECD_01855 - chemotaxis regulator, protein-glutamate methyltransferase, at 1,914,422 to 1,915,282 _01855 ECD_01856: ECD_01856 - methyl-accepting protein IV, at 1,915,301 to 1,916,902 _01856 ECD_01857: ECD_01857 - methyl-accepting chemotaxis protein II, at 1,916,948 to 1,918,609 _01857 Position (kb) 1915 1916 1917Strain fitness (log2 ratio) -2 -1 0 1 2at 1914.891 kb on + strand, within ECD_01855at 1915.194 kb on - strand, within ECD_01855at 1915.248 kb on - strandat 1915.548 kb on - strand, within ECD_01856at 1915.550 kb on - strand, within ECD_01856at 1916.115 kb on - strand, within ECD_01856at 1916.185 kb on - strand, within ECD_01856at 1916.185 kb on - strand, within ECD_01856at 1916.187 kb on - strand, within ECD_01856at 1916.298 kb on + strand, within ECD_01856at 1916.354 kb on - strand, within ECD_01856at 1916.671 kb on - strand, within ECD_01856at 1916.674 kb on + strand, within ECD_01856at 1916.674 kb on + strand, within ECD_01856at 1916.675 kb on - strand, within ECD_01856at 1916.675 kb on - strand, within ECD_01856at 1916.675 kb on - strand, within ECD_01856at 1917.784 kb on - strand, within ECD_01857

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Per-strain Table

Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI
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1,914,891 + ECD_01855 0.54 +0.4
1,915,194 - ECD_01855 0.90 -0.8
1,915,248 - +1.3
1,915,548 - ECD_01856 0.15 +2.4
1,915,550 - ECD_01856 0.16 -1.3
1,916,115 - ECD_01856 0.51 -0.7
1,916,185 - ECD_01856 0.55 +2.6
1,916,185 - ECD_01856 0.55 +2.5
1,916,187 - ECD_01856 0.55 -0.2
1,916,298 + ECD_01856 0.62 -0.3
1,916,354 - ECD_01856 0.66 +1.2
1,916,671 - ECD_01856 0.86 -1.3
1,916,674 + ECD_01856 0.86 +2.3
1,916,674 + ECD_01856 0.86 +0.7
1,916,675 - ECD_01856 0.86 -2.0
1,916,675 - ECD_01856 0.86 +0.8
1,916,675 - ECD_01856 0.86 +2.4
1,917,784 - ECD_01857 0.50 -0.1

Or see this region's nucleotide sequence