Experiment: P2_phage_0.5625_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_01793 and ECD_01794 are separated by 12 nucleotides ECD_01794 and ECD_01795 are separated by 668 nucleotides ECD_01795 and ECD_01796 are separated by 74 nucleotides ECD_01796 and ECD_01797 are separated by 158 nucleotides ECD_01797 and ECD_01798 are separated by 142 nucleotides
ECD_01793: ECD_01793 - stress protein, member of the CspA-family, at 1,852,953 to 1,853,162
_01793
ECD_01794: ECD_01794 - DUF2527 family heat-induced protein, at 1,853,175 to 1,853,318
_01794
ECD_01795: ECD_01795 - putative inner membrane protein, at 1,853,987 to 1,854,274
_01795
ECD_01796: ECD_01796 - regulatory peptide for PhoPQ, feedback inhibition, at 1,854,349 to 1,854,492
_01796
ECD_01797: ECD_01797 - uncharacterized protein, at 1,854,651 to 1,854,890
_01797
ECD_01798: ECD_01798 - KDG regulon transcriptional repressor, at 1,855,033 to 1,855,824
_01798
Position (kb)
1853
1854
1855 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1853.071 kb on - strand, within ECD_01793 at 1853.071 kb on - strand, within ECD_01793 at 1853.121 kb on - strand, within ECD_01793 at 1853.203 kb on - strand, within ECD_01794 at 1853.212 kb on - strand, within ECD_01794 at 1853.212 kb on - strand, within ECD_01794 at 1853.244 kb on - strand, within ECD_01794 at 1853.244 kb on - strand, within ECD_01794 at 1853.244 kb on - strand, within ECD_01794 at 1853.246 kb on - strand, within ECD_01794 at 1853.246 kb on - strand, within ECD_01794 at 1853.319 kb on - strand at 1853.449 kb on - strand at 1853.581 kb on - strand at 1854.014 kb on - strand at 1854.206 kb on - strand, within ECD_01795 at 1854.225 kb on - strand, within ECD_01795 at 1854.225 kb on - strand, within ECD_01795 at 1854.305 kb on - strand at 1854.425 kb on - strand, within ECD_01796 at 1854.512 kb on - strand at 1854.512 kb on - strand at 1854.517 kb on - strand at 1854.517 kb on - strand at 1854.517 kb on - strand at 1854.517 kb on - strand at 1854.519 kb on - strand at 1854.519 kb on - strand at 1854.519 kb on - strand at 1854.559 kb on - strand at 1854.774 kb on + strand, within ECD_01797 at 1854.774 kb on + strand, within ECD_01797 at 1855.104 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI remove 1,853,071 - ECD_01793 0.56 -2.0 1,853,071 - ECD_01793 0.56 -0.5 1,853,121 - ECD_01793 0.80 +2.5 1,853,203 - ECD_01794 0.19 +1.8 1,853,212 - ECD_01794 0.26 +0.5 1,853,212 - ECD_01794 0.26 +0.5 1,853,244 - ECD_01794 0.48 +1.3 1,853,244 - ECD_01794 0.48 -0.3 1,853,244 - ECD_01794 0.48 +0.7 1,853,246 - ECD_01794 0.49 -1.1 1,853,246 - ECD_01794 0.49 +3.5 1,853,319 - -1.1 1,853,449 - +4.0 1,853,581 - +1.6 1,854,014 - -2.0 1,854,206 - ECD_01795 0.76 -1.2 1,854,225 - ECD_01795 0.83 -2.1 1,854,225 - ECD_01795 0.83 -2.1 1,854,305 - -0.1 1,854,425 - ECD_01796 0.53 +2.7 1,854,512 - +1.5 1,854,512 - +3.0 1,854,517 - +1.4 1,854,517 - -0.1 1,854,517 - +2.4 1,854,517 - +1.6 1,854,519 - +2.6 1,854,519 - +2.2 1,854,519 - +1.9 1,854,559 - -0.4 1,854,774 + ECD_01797 0.51 +0.4 1,854,774 + ECD_01797 0.51 -0.0 1,855,104 - -1.6
Or see this region's nucleotide sequence