Strain Fitness in Escherichia coli BL21 around ECD_01795

Experiment: P2_phage_0.5625_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01793 and ECD_01794 are separated by 12 nucleotidesECD_01794 and ECD_01795 are separated by 668 nucleotidesECD_01795 and ECD_01796 are separated by 74 nucleotidesECD_01796 and ECD_01797 are separated by 158 nucleotidesECD_01797 and ECD_01798 are separated by 142 nucleotides ECD_01793: ECD_01793 - stress protein, member of the CspA-family, at 1,852,953 to 1,853,162 _01793 ECD_01794: ECD_01794 - DUF2527 family heat-induced protein, at 1,853,175 to 1,853,318 _01794 ECD_01795: ECD_01795 - putative inner membrane protein, at 1,853,987 to 1,854,274 _01795 ECD_01796: ECD_01796 - regulatory peptide for PhoPQ, feedback inhibition, at 1,854,349 to 1,854,492 _01796 ECD_01797: ECD_01797 - uncharacterized protein, at 1,854,651 to 1,854,890 _01797 ECD_01798: ECD_01798 - KDG regulon transcriptional repressor, at 1,855,033 to 1,855,824 _01798 Position (kb) 1853 1854 1855Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 1853.071 kb on - strand, within ECD_01793at 1853.071 kb on - strand, within ECD_01793at 1853.121 kb on - strand, within ECD_01793at 1853.203 kb on - strand, within ECD_01794at 1853.212 kb on - strand, within ECD_01794at 1853.212 kb on - strand, within ECD_01794at 1853.244 kb on - strand, within ECD_01794at 1853.244 kb on - strand, within ECD_01794at 1853.244 kb on - strand, within ECD_01794at 1853.246 kb on - strand, within ECD_01794at 1853.246 kb on - strand, within ECD_01794at 1853.319 kb on - strandat 1853.449 kb on - strandat 1853.581 kb on - strandat 1854.014 kb on - strandat 1854.206 kb on - strand, within ECD_01795at 1854.225 kb on - strand, within ECD_01795at 1854.225 kb on - strand, within ECD_01795at 1854.305 kb on - strandat 1854.425 kb on - strand, within ECD_01796at 1854.512 kb on - strandat 1854.512 kb on - strandat 1854.517 kb on - strandat 1854.517 kb on - strandat 1854.517 kb on - strandat 1854.517 kb on - strandat 1854.519 kb on - strandat 1854.519 kb on - strandat 1854.519 kb on - strandat 1854.559 kb on - strandat 1854.774 kb on + strand, within ECD_01797at 1854.774 kb on + strand, within ECD_01797at 1855.104 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI
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1,853,071 - ECD_01793 0.56 -2.0
1,853,071 - ECD_01793 0.56 -0.5
1,853,121 - ECD_01793 0.80 +2.5
1,853,203 - ECD_01794 0.19 +1.8
1,853,212 - ECD_01794 0.26 +0.5
1,853,212 - ECD_01794 0.26 +0.5
1,853,244 - ECD_01794 0.48 +1.3
1,853,244 - ECD_01794 0.48 -0.3
1,853,244 - ECD_01794 0.48 +0.7
1,853,246 - ECD_01794 0.49 -1.1
1,853,246 - ECD_01794 0.49 +3.5
1,853,319 - -1.1
1,853,449 - +4.0
1,853,581 - +1.6
1,854,014 - -2.0
1,854,206 - ECD_01795 0.76 -1.2
1,854,225 - ECD_01795 0.83 -2.1
1,854,225 - ECD_01795 0.83 -2.1
1,854,305 - -0.1
1,854,425 - ECD_01796 0.53 +2.7
1,854,512 - +1.5
1,854,512 - +3.0
1,854,517 - +1.4
1,854,517 - -0.1
1,854,517 - +2.4
1,854,517 - +1.6
1,854,519 - +2.6
1,854,519 - +2.2
1,854,519 - +1.9
1,854,559 - -0.4
1,854,774 + ECD_01797 0.51 +0.4
1,854,774 + ECD_01797 0.51 -0.0
1,855,104 - -1.6

Or see this region's nucleotide sequence