Strain Fitness in Escherichia coli BL21 around ECD_01792

Experiment: P2_phage_0.5625_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01790 and ECD_01791 are separated by 428 nucleotidesECD_01791 and ECD_01792 overlap by 4 nucleotidesECD_01792 and ECD_01793 are separated by 165 nucleotidesECD_01793 and ECD_01794 are separated by 12 nucleotides ECD_01790: ECD_01790 - UPF0266 family inner membrane protein, at 1,850,528 to 1,850,986 _01790 ECD_01791: ECD_01791 - putative Mn(2+) efflux pump, mntR-regulated, at 1,851,415 to 1,851,981 _01791 ECD_01792: ECD_01792 - 23S rRNA m(1)G745 methyltransferase, SAM-dependent, at 1,851,978 to 1,852,787 _01792 ECD_01793: ECD_01793 - stress protein, member of the CspA-family, at 1,852,953 to 1,853,162 _01793 ECD_01794: ECD_01794 - DUF2527 family heat-induced protein, at 1,853,175 to 1,853,318 _01794 Position (kb) 1851 1852 1853Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 1851.240 kb on + strandat 1851.296 kb on + strandat 1851.356 kb on + strandat 1851.356 kb on + strandat 1851.357 kb on - strandat 1851.388 kb on + strandat 1851.852 kb on + strand, within ECD_01791at 1852.493 kb on - strand, within ECD_01792at 1852.496 kb on - strand, within ECD_01792at 1852.603 kb on - strand, within ECD_01792at 1852.687 kb on + strand, within ECD_01792at 1852.732 kb on + strandat 1852.733 kb on - strandat 1852.733 kb on - strandat 1852.733 kb on - strandat 1852.733 kb on - strandat 1852.881 kb on - strandat 1852.881 kb on - strandat 1852.926 kb on - strandat 1852.926 kb on - strandat 1852.959 kb on - strandat 1852.959 kb on - strandat 1852.966 kb on - strandat 1853.071 kb on - strand, within ECD_01793at 1853.071 kb on - strand, within ECD_01793at 1853.121 kb on - strand, within ECD_01793at 1853.203 kb on - strand, within ECD_01794at 1853.212 kb on - strand, within ECD_01794at 1853.212 kb on - strand, within ECD_01794at 1853.244 kb on - strand, within ECD_01794at 1853.244 kb on - strand, within ECD_01794at 1853.244 kb on - strand, within ECD_01794at 1853.246 kb on - strand, within ECD_01794at 1853.246 kb on - strand, within ECD_01794at 1853.319 kb on - strandat 1853.449 kb on - strandat 1853.581 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI
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1,851,240 + -0.7
1,851,296 + -0.6
1,851,356 + +3.0
1,851,356 + +0.9
1,851,357 - +2.7
1,851,388 + -0.3
1,851,852 + ECD_01791 0.77 +0.9
1,852,493 - ECD_01792 0.64 -0.8
1,852,496 - ECD_01792 0.64 -0.9
1,852,603 - ECD_01792 0.77 -0.5
1,852,687 + ECD_01792 0.88 -0.8
1,852,732 + -0.6
1,852,733 - -1.1
1,852,733 - +0.2
1,852,733 - +0.3
1,852,733 - -0.1
1,852,881 - -0.7
1,852,881 - -0.4
1,852,926 - +2.2
1,852,926 - +2.1
1,852,959 - +2.8
1,852,959 - +0.9
1,852,966 - +1.1
1,853,071 - ECD_01793 0.56 -2.0
1,853,071 - ECD_01793 0.56 -0.5
1,853,121 - ECD_01793 0.80 +2.5
1,853,203 - ECD_01794 0.19 +1.8
1,853,212 - ECD_01794 0.26 +0.5
1,853,212 - ECD_01794 0.26 +0.5
1,853,244 - ECD_01794 0.48 +1.3
1,853,244 - ECD_01794 0.48 -0.3
1,853,244 - ECD_01794 0.48 +0.7
1,853,246 - ECD_01794 0.49 -1.1
1,853,246 - ECD_01794 0.49 +3.5
1,853,319 - -1.1
1,853,449 - +4.0
1,853,581 - +1.6

Or see this region's nucleotide sequence