Strain Fitness in Escherichia coli BL21 around ECD_01667

Experiment: P2_phage_0.5625_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01666 and ECD_01667 are separated by 19 nucleotidesECD_01667 and ECD_01668 are separated by 55 nucleotides ECD_01666: ECD_01666 - putative electron transfer flavoprotein subunit, at 1,724,033 to 1,724,797 _01666 ECD_01667: ECD_01667 - putative electron transfer flavoprotein, FAD-binding subunit, at 1,724,817 to 1,725,755 _01667 ECD_01668: ECD_01668 - putative oxidoreductase, at 1,725,811 to 1,727,100 _01668 Position (kb) 1724 1725 1726Strain fitness (log2 ratio) -1 0 1 2at 1724.040 kb on + strandat 1724.276 kb on + strand, within ECD_01666at 1724.276 kb on + strand, within ECD_01666at 1724.278 kb on + strand, within ECD_01666at 1724.719 kb on + strand, within ECD_01666at 1725.287 kb on + strand, within ECD_01667at 1725.321 kb on + strand, within ECD_01667at 1725.322 kb on - strand, within ECD_01667at 1726.352 kb on - strand, within ECD_01668at 1726.491 kb on + strand, within ECD_01668

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Per-strain Table

Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI
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1,724,040 + +2.2
1,724,276 + ECD_01666 0.32 -0.6
1,724,276 + ECD_01666 0.32 +1.3
1,724,278 + ECD_01666 0.32 +2.3
1,724,719 + ECD_01666 0.90 +1.6
1,725,287 + ECD_01667 0.50 -0.4
1,725,321 + ECD_01667 0.54 -0.3
1,725,322 - ECD_01667 0.54 +0.2
1,726,352 - ECD_01668 0.42 -0.6
1,726,491 + ECD_01668 0.53 +0.8

Or see this region's nucleotide sequence