Strain Fitness in Escherichia coli BL21 around ECD_01651

Experiment: P2_phage_0.5625_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01650 and ECD_01651 overlap by 26 nucleotidesECD_01651 and ECD_01652 are separated by 9 nucleotides ECD_01650: ECD_01650 - component of SufBCD Fe-S cluster assembly scaffold, at 1,705,789 to 1,707,060 _01650 ECD_01651: ECD_01651 - SufBCD Fe-S cluster assembly scaffold protein, ATP-binding protein, at 1,707,035 to 1,707,781 _01651 ECD_01652: ECD_01652 - component of SufBCD complex, at 1,707,791 to 1,708,801 _01652 Position (kb) 1707 1708Strain fitness (log2 ratio) -1 0 1 2 3at 1706.122 kb on - strand, within ECD_01650at 1706.176 kb on - strand, within ECD_01650at 1706.335 kb on - strand, within ECD_01650at 1706.593 kb on - strand, within ECD_01650at 1706.908 kb on - strand, within ECD_01650at 1707.124 kb on - strand, within ECD_01651at 1707.125 kb on + strand, within ECD_01651at 1707.125 kb on + strand, within ECD_01651at 1707.126 kb on - strand, within ECD_01651at 1707.240 kb on - strand, within ECD_01651at 1707.659 kb on - strand, within ECD_01651at 1707.962 kb on - strand, within ECD_01652at 1708.017 kb on + strand, within ECD_01652at 1708.530 kb on + strand, within ECD_01652at 1708.609 kb on - strand, within ECD_01652at 1708.643 kb on - strand, within ECD_01652at 1708.651 kb on - strand, within ECD_01652at 1708.655 kb on - strand, within ECD_01652at 1708.673 kb on + strand, within ECD_01652

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Per-strain Table

Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI
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1,706,122 - ECD_01650 0.26 -0.5
1,706,176 - ECD_01650 0.30 -0.5
1,706,335 - ECD_01650 0.43 +0.4
1,706,593 - ECD_01650 0.63 -0.3
1,706,908 - ECD_01650 0.88 +0.9
1,707,124 - ECD_01651 0.12 -0.6
1,707,125 + ECD_01651 0.12 -0.1
1,707,125 + ECD_01651 0.12 +0.8
1,707,126 - ECD_01651 0.12 +0.6
1,707,240 - ECD_01651 0.27 +2.8
1,707,659 - ECD_01651 0.84 +2.6
1,707,962 - ECD_01652 0.17 +1.5
1,708,017 + ECD_01652 0.22 -0.4
1,708,530 + ECD_01652 0.73 +0.8
1,708,609 - ECD_01652 0.81 +1.8
1,708,643 - ECD_01652 0.84 +1.6
1,708,651 - ECD_01652 0.85 -1.7
1,708,655 - ECD_01652 0.85 +2.5
1,708,673 + ECD_01652 0.87 -0.2

Or see this region's nucleotide sequence