Strain Fitness in Escherichia coli BL21 around ECD_01608

Experiment: P2_phage_0.5625_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01607 and ECD_01608 are separated by 128 nucleotidesECD_01608 and ECD_01609 are separated by 58 nucleotidesECD_01609 and ECD_01610 are separated by 97 nucleotides ECD_01607: ECD_01607 - tyrosyl-tRNA synthetase, at 1,661,144 to 1,662,418 _01607 ECD_01608: ECD_01608 - pyridoxine 5'-phosphate oxidase, at 1,662,547 to 1,663,203 _01608 ECD_01609: ECD_01609 - inhibitor of c-type lysozyme, membrane-bound; putative lipoprotein, at 1,663,262 to 1,663,591 _01609 ECD_01610: ECD_01610 - anhydro-N-acetylmuramic acid kinase, at 1,663,689 to 1,664,798 _01610 Position (kb) 1662 1663 1664Strain fitness (log2 ratio) -1 0 1 2 3at 1662.495 kb on - strandat 1663.679 kb on - strandat 1663.921 kb on - strand, within ECD_01610at 1664.056 kb on + strand, within ECD_01610at 1664.057 kb on - strand, within ECD_01610at 1664.057 kb on - strand, within ECD_01610at 1664.065 kb on + strand, within ECD_01610at 1664.141 kb on + strand, within ECD_01610

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Per-strain Table

Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI
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1,662,495 - -0.5
1,663,679 - -1.5
1,663,921 - ECD_01610 0.21 +3.4
1,664,056 + ECD_01610 0.33 +0.5
1,664,057 - ECD_01610 0.33 +3.1
1,664,057 - ECD_01610 0.33 +2.0
1,664,065 + ECD_01610 0.34 -0.5
1,664,141 + ECD_01610 0.41 +1.0

Or see this region's nucleotide sequence