Strain Fitness in Escherichia coli BL21 around ECD_01575

Experiment: P2_phage_0.5625_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01574 and ECD_01575 are separated by 36 nucleotidesECD_01575 and ECD_01576 overlap by 4 nucleotidesECD_01576 and ECD_01577 are separated by 128 nucleotides ECD_01574: ECD_01574 - putative arginine/ornithine antiporter transporter, at 1,624,754 to 1,626,136 _01574 ECD_01575: ECD_01575 - dihydromonapterin reductase, NADPH-dependent; dihydrofolate reductase isozyme, at 1,626,173 to 1,626,895 _01575 ECD_01576: ECD_01576 - GlpM family inner membrane protein, at 1,626,892 to 1,627,227 _01576 ECD_01577: ECD_01577 - response regulator of RstAB two-component system, at 1,627,356 to 1,628,075 _01577 Position (kb) 1626 1627Strain fitness (log2 ratio) -1 0 1at 1626.294 kb on - strand, within ECD_01575at 1626.541 kb on - strand, within ECD_01575at 1626.915 kb on + strandat 1627.045 kb on - strand, within ECD_01576at 1627.369 kb on + strandat 1627.649 kb on + strand, within ECD_01577at 1627.649 kb on + strand, within ECD_01577

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Per-strain Table

Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI
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1,626,294 - ECD_01575 0.17 -0.6
1,626,541 - ECD_01575 0.51 -1.4
1,626,915 + -0.6
1,627,045 - ECD_01576 0.46 -1.2
1,627,369 + -1.0
1,627,649 + ECD_01577 0.41 -0.8
1,627,649 + ECD_01577 0.41 +0.3

Or see this region's nucleotide sequence