Strain Fitness in Escherichia coli BL21 around ECD_01525

Experiment: P2_phage_0.5625_MOI

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntECD_01508 and ECD_01524 are separated by 651 nucleotidesECD_01524 and ECD_01525 overlap by 4 nucleotidesECD_01525 and ECD_01527 are separated by 369 nucleotides ECD_01508: ECD_01508 - Rac prophage; putative tail fiber protein, at 1,585,034 to 1,586,335 _01508 ECD_01524: ECD_01524 - putative transposase-related protein, at 1,586,987 to 1,587,295 _01524 ECD_01525: ECD_01525 - putative transposase for IS3, at 1,587,292 to 1,588,158 _01525 ECD_01527: ECD_01527 - putative lipoprotein, at 1,588,528 to 1,589,052 _01527 Position (kb) 1587 1588 1589Strain fitness (log2 ratio) -1 0 1 2 3at 1588.475 kb on + strandat 1588.577 kb on + strandat 1589.132 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI
remove
1,588,475 + -0.2
1,588,577 + +3.2
1,589,132 - +2.4

Or see this region's nucleotide sequence