Strain Fitness in Escherichia coli BL21 around ECD_01074

Experiment: P2_phage_0.5625_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01072 and ECD_01073 are separated by 19 nucleotidesECD_01073 and ECD_01074 are separated by 171 nucleotidesECD_01074 and ECD_01075 are separated by 52 nucleotidesECD_01075 and ECD_01076 are separated by 11 nucleotides ECD_01072: ECD_01072 - flagellar hook protein, at 1,135,144 to 1,136,349 _01072 ECD_01073: ECD_01073 - flagellar component of cell-proximal portion of basal-body rod, at 1,136,369 to 1,137,124 _01073 ECD_01074: ECD_01074 - flagellar component of cell-distal portion of basal-body rod, at 1,137,296 to 1,138,078 _01074 ECD_01075: ECD_01075 - flagellar protein of basal-body outer-membrane L ring, at 1,138,131 to 1,138,829 _01075 ECD_01076: ECD_01076 - putative flagellar basal body protein, at 1,138,841 to 1,139,938 _01076 Position (kb) 1137 1138 1139Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1136.337 kb on + strandat 1136.342 kb on + strandat 1136.362 kb on + strandat 1136.362 kb on + strandat 1136.384 kb on + strandat 1137.134 kb on + strandat 1137.145 kb on + strandat 1137.145 kb on + strandat 1137.145 kb on + strandat 1137.145 kb on + strandat 1137.147 kb on + strandat 1137.147 kb on + strandat 1137.147 kb on + strandat 1137.260 kb on + strandat 1137.295 kb on + strandat 1137.385 kb on + strand, within ECD_01074at 1137.510 kb on + strand, within ECD_01074at 1137.635 kb on + strand, within ECD_01074at 1137.735 kb on + strand, within ECD_01074at 1137.739 kb on + strand, within ECD_01074at 1137.947 kb on + strand, within ECD_01074at 1138.027 kb on + strandat 1138.151 kb on + strandat 1138.151 kb on + strandat 1138.155 kb on + strandat 1138.155 kb on + strandat 1138.308 kb on + strand, within ECD_01075at 1138.308 kb on + strand, within ECD_01075at 1138.430 kb on + strand, within ECD_01075at 1138.451 kb on + strand, within ECD_01075at 1138.556 kb on + strand, within ECD_01075at 1138.556 kb on + strand, within ECD_01075at 1138.556 kb on + strand, within ECD_01075at 1138.749 kb on + strand, within ECD_01075at 1138.764 kb on + strandat 1138.827 kb on + strandat 1138.863 kb on + strandat 1139.026 kb on + strand, within ECD_01076at 1139.029 kb on + strand, within ECD_01076at 1139.074 kb on + strand, within ECD_01076at 1139.074 kb on + strand, within ECD_01076

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Per-strain Table

Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI
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1,136,337 + +0.6
1,136,342 + +0.1
1,136,362 + -1.5
1,136,362 + +1.9
1,136,384 + +2.3
1,137,134 + +1.9
1,137,145 + +2.9
1,137,145 + -0.6
1,137,145 + +1.1
1,137,145 + -2.4
1,137,147 + -0.1
1,137,147 + +2.5
1,137,147 + +1.8
1,137,260 + +1.0
1,137,295 + -1.9
1,137,385 + ECD_01074 0.11 -1.8
1,137,510 + ECD_01074 0.27 -2.2
1,137,635 + ECD_01074 0.43 -1.0
1,137,735 + ECD_01074 0.56 -2.4
1,137,739 + ECD_01074 0.57 -1.2
1,137,947 + ECD_01074 0.83 -0.1
1,138,027 + +2.1
1,138,151 + -1.4
1,138,151 + +1.8
1,138,155 + -0.3
1,138,155 + +2.8
1,138,308 + ECD_01075 0.25 -2.5
1,138,308 + ECD_01075 0.25 +1.7
1,138,430 + ECD_01075 0.43 -1.0
1,138,451 + ECD_01075 0.46 -2.4
1,138,556 + ECD_01075 0.61 -0.8
1,138,556 + ECD_01075 0.61 -1.0
1,138,556 + ECD_01075 0.61 -0.3
1,138,749 + ECD_01075 0.88 -2.4
1,138,764 + -0.7
1,138,827 + -0.8
1,138,863 + -0.1
1,139,026 + ECD_01076 0.17 -1.8
1,139,029 + ECD_01076 0.17 +0.3
1,139,074 + ECD_01076 0.21 +0.7
1,139,074 + ECD_01076 0.21 +1.0

Or see this region's nucleotide sequence