Experiment: P2_phage_0.5625_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_01072 and ECD_01073 are separated by 19 nucleotides ECD_01073 and ECD_01074 are separated by 171 nucleotides ECD_01074 and ECD_01075 are separated by 52 nucleotides ECD_01075 and ECD_01076 are separated by 11 nucleotides
ECD_01072: ECD_01072 - flagellar hook protein, at 1,135,144 to 1,136,349
_01072
ECD_01073: ECD_01073 - flagellar component of cell-proximal portion of basal-body rod, at 1,136,369 to 1,137,124
_01073
ECD_01074: ECD_01074 - flagellar component of cell-distal portion of basal-body rod, at 1,137,296 to 1,138,078
_01074
ECD_01075: ECD_01075 - flagellar protein of basal-body outer-membrane L ring, at 1,138,131 to 1,138,829
_01075
ECD_01076: ECD_01076 - putative flagellar basal body protein, at 1,138,841 to 1,139,938
_01076
Position (kb)
1137
1138
1139 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1136.337 kb on + strand at 1136.342 kb on + strand at 1136.362 kb on + strand at 1136.362 kb on + strand at 1136.384 kb on + strand at 1137.134 kb on + strand at 1137.145 kb on + strand at 1137.145 kb on + strand at 1137.145 kb on + strand at 1137.145 kb on + strand at 1137.147 kb on + strand at 1137.147 kb on + strand at 1137.147 kb on + strand at 1137.260 kb on + strand at 1137.295 kb on + strand at 1137.385 kb on + strand, within ECD_01074 at 1137.510 kb on + strand, within ECD_01074 at 1137.635 kb on + strand, within ECD_01074 at 1137.735 kb on + strand, within ECD_01074 at 1137.739 kb on + strand, within ECD_01074 at 1137.947 kb on + strand, within ECD_01074 at 1138.027 kb on + strand at 1138.151 kb on + strand at 1138.151 kb on + strand at 1138.155 kb on + strand at 1138.155 kb on + strand at 1138.308 kb on + strand, within ECD_01075 at 1138.308 kb on + strand, within ECD_01075 at 1138.430 kb on + strand, within ECD_01075 at 1138.451 kb on + strand, within ECD_01075 at 1138.556 kb on + strand, within ECD_01075 at 1138.556 kb on + strand, within ECD_01075 at 1138.556 kb on + strand, within ECD_01075 at 1138.749 kb on + strand, within ECD_01075 at 1138.764 kb on + strand at 1138.827 kb on + strand at 1138.863 kb on + strand at 1139.026 kb on + strand, within ECD_01076 at 1139.029 kb on + strand, within ECD_01076 at 1139.074 kb on + strand, within ECD_01076 at 1139.074 kb on + strand, within ECD_01076
Per-strain Table
Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI remove 1,136,337 + +0.6 1,136,342 + +0.1 1,136,362 + -1.5 1,136,362 + +1.9 1,136,384 + +2.3 1,137,134 + +1.9 1,137,145 + +2.9 1,137,145 + -0.6 1,137,145 + +1.1 1,137,145 + -2.4 1,137,147 + -0.1 1,137,147 + +2.5 1,137,147 + +1.8 1,137,260 + +1.0 1,137,295 + -1.9 1,137,385 + ECD_01074 0.11 -1.8 1,137,510 + ECD_01074 0.27 -2.2 1,137,635 + ECD_01074 0.43 -1.0 1,137,735 + ECD_01074 0.56 -2.4 1,137,739 + ECD_01074 0.57 -1.2 1,137,947 + ECD_01074 0.83 -0.1 1,138,027 + +2.1 1,138,151 + -1.4 1,138,151 + +1.8 1,138,155 + -0.3 1,138,155 + +2.8 1,138,308 + ECD_01075 0.25 -2.5 1,138,308 + ECD_01075 0.25 +1.7 1,138,430 + ECD_01075 0.43 -1.0 1,138,451 + ECD_01075 0.46 -2.4 1,138,556 + ECD_01075 0.61 -0.8 1,138,556 + ECD_01075 0.61 -1.0 1,138,556 + ECD_01075 0.61 -0.3 1,138,749 + ECD_01075 0.88 -2.4 1,138,764 + -0.7 1,138,827 + -0.8 1,138,863 + -0.1 1,139,026 + ECD_01076 0.17 -1.8 1,139,029 + ECD_01076 0.17 +0.3 1,139,074 + ECD_01076 0.21 +0.7 1,139,074 + ECD_01076 0.21 +1.0
Or see this region's nucleotide sequence