Experiment: P2_phage_0.5625_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00558 and ECD_00559 are separated by 3 nucleotides ECD_00559 and ECD_00560 are separated by 374 nucleotides
ECD_00558: ECD_00558 - enterobactin exporter, iron-regulated, at 582,787 to 584,037
_00558
ECD_00559: ECD_00559 - ferrienterobactin ABC transporter periplasmic binding protein, at 584,041 to 584,997
_00559
ECD_00560: ECD_00560 - isochorismate synthase 1, at 585,372 to 586,547
_00560
Position (kb) 584
585 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 583.130 kb on + strand, within ECD_00558 at 583.131 kb on - strand, within ECD_00558 at 583.289 kb on + strand, within ECD_00558 at 583.321 kb on + strand, within ECD_00558 at 583.350 kb on + strand, within ECD_00558 at 583.350 kb on + strand, within ECD_00558 at 583.350 kb on + strand, within ECD_00558 at 583.635 kb on + strand, within ECD_00558 at 583.636 kb on - strand, within ECD_00558 at 583.636 kb on - strand, within ECD_00558 at 583.636 kb on - strand, within ECD_00558 at 583.636 kb on - strand, within ECD_00558 at 583.783 kb on + strand, within ECD_00558 at 584.035 kb on + strand at 584.043 kb on - strand at 584.055 kb on + strand at 584.056 kb on - strand at 584.402 kb on + strand, within ECD_00559 at 584.559 kb on - strand, within ECD_00559 at 584.693 kb on + strand, within ECD_00559 at 584.694 kb on - strand, within ECD_00559 at 584.853 kb on + strand, within ECD_00559 at 584.878 kb on - strand, within ECD_00559 at 584.963 kb on - strand at 585.017 kb on - strand at 585.289 kb on - strand at 585.377 kb on + strand at 585.377 kb on + strand at 585.378 kb on - strand at 585.440 kb on + strand at 585.636 kb on + strand, within ECD_00560 at 585.636 kb on + strand, within ECD_00560 at 585.636 kb on + strand, within ECD_00560 at 585.636 kb on + strand, within ECD_00560 at 585.637 kb on - strand, within ECD_00560 at 585.637 kb on - strand, within ECD_00560 at 585.637 kb on - strand, within ECD_00560 at 585.639 kb on - strand, within ECD_00560 at 585.789 kb on - strand, within ECD_00560 at 585.971 kb on - strand, within ECD_00560
Per-strain Table
Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI remove 583,130 + ECD_00558 0.27 +2.4 583,131 - ECD_00558 0.27 -2.0 583,289 + ECD_00558 0.40 +0.6 583,321 + ECD_00558 0.43 +2.7 583,350 + ECD_00558 0.45 +0.3 583,350 + ECD_00558 0.45 -1.4 583,350 + ECD_00558 0.45 -0.6 583,635 + ECD_00558 0.68 +0.6 583,636 - ECD_00558 0.68 -1.6 583,636 - ECD_00558 0.68 -1.6 583,636 - ECD_00558 0.68 +3.1 583,636 - ECD_00558 0.68 -1.6 583,783 + ECD_00558 0.80 -1.1 584,035 + -0.2 584,043 - +0.7 584,055 + -2.4 584,056 - +1.3 584,402 + ECD_00559 0.38 -2.0 584,559 - ECD_00559 0.54 -0.0 584,693 + ECD_00559 0.68 -1.8 584,694 - ECD_00559 0.68 -2.2 584,853 + ECD_00559 0.85 -1.4 584,878 - ECD_00559 0.87 -0.9 584,963 - -1.8 585,017 - +1.5 585,289 - +2.6 585,377 + -3.1 585,377 + -0.3 585,378 - +0.7 585,440 + -2.1 585,636 + ECD_00560 0.22 -1.8 585,636 + ECD_00560 0.22 -1.0 585,636 + ECD_00560 0.22 -0.9 585,636 + ECD_00560 0.22 +2.0 585,637 - ECD_00560 0.23 +0.4 585,637 - ECD_00560 0.23 -0.7 585,637 - ECD_00560 0.23 -0.3 585,639 - ECD_00560 0.23 +1.4 585,789 - ECD_00560 0.35 +1.0 585,971 - ECD_00560 0.51 +0.3
Or see this region's nucleotide sequence