Experiment: P2_phage_0.5625_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00464 and ECD_00465 are separated by 227 nucleotides ECD_00465 and ECD_00466 are separated by 10 nucleotides
ECD_00464: ECD_00464 - glycerate kinase II, at 511,033 to 512,178
_00464
ECD_00465: ECD_00465 - S-ureidoglycine aminohydrolase, at 512,406 to 513,191
_00465
ECD_00466: ECD_00466 - allantoate amidohydrolase, at 513,202 to 514,437
_00466
Position (kb) 512
513
514 Strain fitness (log2 ratio) -2
-1
0
1
2 at 511.417 kb on - strand, within ECD_00464 at 511.530 kb on + strand, within ECD_00464 at 511.717 kb on + strand, within ECD_00464 at 511.827 kb on + strand, within ECD_00464 at 512.375 kb on + strand at 512.376 kb on - strand at 512.578 kb on + strand, within ECD_00465 at 512.708 kb on + strand, within ECD_00465 at 512.716 kb on + strand, within ECD_00465 at 512.776 kb on - strand, within ECD_00465 at 512.795 kb on + strand, within ECD_00465 at 512.796 kb on - strand, within ECD_00465 at 512.797 kb on + strand, within ECD_00465 at 512.919 kb on - strand, within ECD_00465 at 512.936 kb on - strand, within ECD_00465 at 513.150 kb on + strand at 513.181 kb on - strand at 513.490 kb on - strand, within ECD_00466 at 513.571 kb on - strand, within ECD_00466 at 513.790 kb on - strand, within ECD_00466 at 513.790 kb on - strand, within ECD_00466 at 513.889 kb on - strand, within ECD_00466 at 514.041 kb on - strand, within ECD_00466 at 514.090 kb on - strand, within ECD_00466 at 514.090 kb on - strand, within ECD_00466
Per-strain Table
Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI remove 511,417 - ECD_00464 0.34 +0.2 511,530 + ECD_00464 0.43 -0.2 511,717 + ECD_00464 0.60 +1.9 511,827 + ECD_00464 0.69 -1.1 512,375 + +2.2 512,376 - -0.5 512,578 + ECD_00465 0.22 +1.8 512,708 + ECD_00465 0.38 -1.3 512,716 + ECD_00465 0.39 -1.7 512,776 - ECD_00465 0.47 -2.5 512,795 + ECD_00465 0.49 -2.3 512,796 - ECD_00465 0.50 -1.3 512,797 + ECD_00465 0.50 +0.5 512,919 - ECD_00465 0.65 -2.3 512,936 - ECD_00465 0.67 -1.8 513,150 + -2.4 513,181 - +1.4 513,490 - ECD_00466 0.23 +1.9 513,571 - ECD_00466 0.30 -2.4 513,790 - ECD_00466 0.48 +1.6 513,790 - ECD_00466 0.48 +0.6 513,889 - ECD_00466 0.56 +1.2 514,041 - ECD_00466 0.68 -1.3 514,090 - ECD_00466 0.72 -1.9 514,090 - ECD_00466 0.72 -0.9
Or see this region's nucleotide sequence