Experiment: P2_phage_0.5625_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00263 and ECD_00264 overlap by 8 nucleotides ECD_00264 and ECD_00265 overlap by 46 nucleotides ECD_00265 and ECD_00266 are separated by 75 nucleotides
ECD_00263: ECD_00263 - ferridoxin-like LutB family protein; putative electron transport chain YkgEFG component, at 291,966 to 293,393
_00263
ECD_00264: ECD_00264 - LutC family protein; putative electron transport chain YkgEFG component, at 293,386 to 294,081
_00264
ECD_00265: ECD_00265 - hypothetical protein, at 294,036 to 294,248
_00265
ECD_00266: ECD_00266 - putative inner membrane protein, at 294,324 to 294,992
_00266
Position (kb) 293
294
295 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 292.386 kb on + strand, within ECD_00263 at 292.386 kb on + strand, within ECD_00263 at 292.387 kb on - strand, within ECD_00263 at 292.567 kb on + strand, within ECD_00263 at 292.649 kb on + strand, within ECD_00263 at 292.670 kb on + strand, within ECD_00263 at 292.694 kb on + strand, within ECD_00263 at 292.717 kb on + strand, within ECD_00263 at 292.717 kb on + strand, within ECD_00263 at 292.717 kb on + strand, within ECD_00263 at 292.724 kb on - strand, within ECD_00263 at 292.724 kb on - strand, within ECD_00263 at 292.925 kb on + strand, within ECD_00263 at 292.926 kb on - strand, within ECD_00263 at 292.939 kb on - strand, within ECD_00263 at 292.946 kb on + strand, within ECD_00263 at 293.187 kb on + strand, within ECD_00263 at 293.196 kb on - strand, within ECD_00263 at 293.256 kb on - strand at 293.412 kb on + strand at 293.475 kb on + strand, within ECD_00264 at 293.482 kb on + strand, within ECD_00264 at 293.482 kb on + strand, within ECD_00264 at 293.482 kb on + strand, within ECD_00264 at 293.482 kb on + strand, within ECD_00264 at 293.508 kb on + strand, within ECD_00264 at 293.556 kb on + strand, within ECD_00264 at 293.556 kb on + strand, within ECD_00264 at 293.557 kb on - strand, within ECD_00264 at 293.557 kb on - strand, within ECD_00264 at 293.557 kb on - strand, within ECD_00264 at 293.610 kb on - strand, within ECD_00264 at 293.619 kb on + strand, within ECD_00264 at 293.619 kb on + strand, within ECD_00264 at 293.619 kb on + strand, within ECD_00264 at 293.683 kb on - strand, within ECD_00264 at 293.746 kb on - strand, within ECD_00264 at 293.782 kb on + strand, within ECD_00264 at 293.782 kb on + strand, within ECD_00264 at 293.870 kb on - strand, within ECD_00264 at 294.058 kb on + strand at 294.224 kb on + strand, within ECD_00265 at 294.901 kb on - strand, within ECD_00266
Per-strain Table
Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI remove 292,386 + ECD_00263 0.29 -2.7 292,386 + ECD_00263 0.29 -1.0 292,387 - ECD_00263 0.29 +0.7 292,567 + ECD_00263 0.42 -0.7 292,649 + ECD_00263 0.48 +1.1 292,670 + ECD_00263 0.49 -2.0 292,694 + ECD_00263 0.51 +3.3 292,717 + ECD_00263 0.53 -0.1 292,717 + ECD_00263 0.53 -0.5 292,717 + ECD_00263 0.53 -0.2 292,724 - ECD_00263 0.53 -0.6 292,724 - ECD_00263 0.53 -1.7 292,925 + ECD_00263 0.67 +0.0 292,926 - ECD_00263 0.67 +0.9 292,939 - ECD_00263 0.68 +0.1 292,946 + ECD_00263 0.69 -3.0 293,187 + ECD_00263 0.86 +2.2 293,196 - ECD_00263 0.86 -0.7 293,256 - +0.5 293,412 + -1.6 293,475 + ECD_00264 0.13 +0.9 293,482 + ECD_00264 0.14 -0.9 293,482 + ECD_00264 0.14 +2.5 293,482 + ECD_00264 0.14 -2.4 293,482 + ECD_00264 0.14 -0.4 293,508 + ECD_00264 0.18 -2.2 293,556 + ECD_00264 0.24 -1.0 293,556 + ECD_00264 0.24 +0.1 293,557 - ECD_00264 0.25 -1.6 293,557 - ECD_00264 0.25 -1.6 293,557 - ECD_00264 0.25 +0.0 293,610 - ECD_00264 0.32 -2.3 293,619 + ECD_00264 0.33 -2.4 293,619 + ECD_00264 0.33 +0.1 293,619 + ECD_00264 0.33 +1.1 293,683 - ECD_00264 0.43 -1.0 293,746 - ECD_00264 0.52 -0.6 293,782 + ECD_00264 0.57 -2.2 293,782 + ECD_00264 0.57 -1.4 293,870 - ECD_00264 0.70 -1.7 294,058 + -2.2 294,224 + ECD_00265 0.88 -1.6 294,901 - ECD_00266 0.86 -2.4
Or see this region's nucleotide sequence