Strain Fitness in Escherichia coli BL21 around ECD_00132

Experiment: P2_phage_0.5625_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00131 and ECD_00132 are separated by 73 nucleotidesECD_00132 and ECD_00133 are separated by 11 nucleotidesECD_00133 and ECD_00134 are separated by 112 nucleotides ECD_00131: ECD_00131 - transposase_31 family protein, at 149,772 to 150,674 _00131 ECD_00132: ECD_00132 - pantothenate synthetase, at 150,748 to 151,599 _00132 ECD_00133: ECD_00133 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 151,611 to 152,405 _00133 ECD_00134: ECD_00134 - putative fimbrial-like adhesin protein, at 152,518 to 153,864 _00134 Position (kb) 150 151 152Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 149.857 kb on + strandat 150.065 kb on + strand, within ECD_00131at 150.065 kb on + strand, within ECD_00131at 150.066 kb on - strand, within ECD_00131at 150.189 kb on + strand, within ECD_00131at 150.218 kb on + strand, within ECD_00131at 150.219 kb on - strand, within ECD_00131at 150.219 kb on - strand, within ECD_00131at 150.331 kb on + strand, within ECD_00131at 150.332 kb on - strand, within ECD_00131at 150.332 kb on - strand, within ECD_00131at 150.332 kb on - strand, within ECD_00131at 150.376 kb on - strand, within ECD_00131at 150.376 kb on - strand, within ECD_00131at 150.411 kb on + strand, within ECD_00131at 150.412 kb on - strand, within ECD_00131at 150.413 kb on + strand, within ECD_00131at 150.432 kb on - strand, within ECD_00131at 150.453 kb on + strand, within ECD_00131at 150.562 kb on + strand, within ECD_00131at 150.562 kb on + strand, within ECD_00131at 150.562 kb on + strand, within ECD_00131at 150.562 kb on + strand, within ECD_00131at 150.563 kb on - strand, within ECD_00131at 150.662 kb on + strandat 150.663 kb on - strandat 150.686 kb on + strandat 150.746 kb on + strandat 150.924 kb on + strand, within ECD_00132at 150.986 kb on + strand, within ECD_00132at 151.069 kb on - strand, within ECD_00132at 151.104 kb on + strand, within ECD_00132at 151.277 kb on + strand, within ECD_00132at 151.277 kb on + strand, within ECD_00132at 151.277 kb on + strand, within ECD_00132at 151.277 kb on + strand, within ECD_00132at 151.277 kb on + strand, within ECD_00132at 151.278 kb on - strand, within ECD_00132at 151.278 kb on - strand, within ECD_00132at 151.489 kb on - strand, within ECD_00132at 151.594 kb on + strandat 151.664 kb on + strandat 151.666 kb on + strandat 151.666 kb on + strandat 151.666 kb on + strandat 151.667 kb on - strandat 151.667 kb on - strandat 151.667 kb on - strandat 151.724 kb on + strand, within ECD_00133at 151.835 kb on + strand, within ECD_00133at 151.897 kb on - strand, within ECD_00133at 151.902 kb on + strand, within ECD_00133at 151.903 kb on - strand, within ECD_00133at 151.951 kb on - strand, within ECD_00133at 151.958 kb on - strand, within ECD_00133at 151.996 kb on - strand, within ECD_00133at 151.996 kb on - strand, within ECD_00133at 152.047 kb on - strand, within ECD_00133at 152.138 kb on - strand, within ECD_00133at 152.190 kb on + strand, within ECD_00133at 152.191 kb on - strand, within ECD_00133at 152.191 kb on - strand, within ECD_00133at 152.191 kb on - strand, within ECD_00133at 152.292 kb on - strand, within ECD_00133at 152.325 kb on - strand, within ECD_00133at 152.361 kb on - strandat 152.369 kb on + strandat 152.445 kb on + strandat 152.475 kb on - strandat 152.481 kb on + strandat 152.516 kb on + strandat 152.516 kb on + strandat 152.517 kb on - strandat 152.569 kb on + strandat 152.570 kb on - strandat 152.577 kb on + strandat 152.594 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI
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149,857 + +0.1
150,065 + ECD_00131 0.32 -2.2
150,065 + ECD_00131 0.32 +0.8
150,066 - ECD_00131 0.33 -2.0
150,189 + ECD_00131 0.46 -1.0
150,218 + ECD_00131 0.49 +0.7
150,219 - ECD_00131 0.50 -0.1
150,219 - ECD_00131 0.50 -1.9
150,331 + ECD_00131 0.62 -2.0
150,332 - ECD_00131 0.62 -2.1
150,332 - ECD_00131 0.62 +0.6
150,332 - ECD_00131 0.62 +1.3
150,376 - ECD_00131 0.67 -1.7
150,376 - ECD_00131 0.67 -0.5
150,411 + ECD_00131 0.71 +0.8
150,412 - ECD_00131 0.71 -2.1
150,413 + ECD_00131 0.71 -2.3
150,432 - ECD_00131 0.73 +2.1
150,453 + ECD_00131 0.75 +1.1
150,562 + ECD_00131 0.87 +0.0
150,562 + ECD_00131 0.87 -2.9
150,562 + ECD_00131 0.87 -2.5
150,562 + ECD_00131 0.87 -2.5
150,563 - ECD_00131 0.88 -1.4
150,662 + +1.2
150,663 - -0.8
150,686 + +1.1
150,746 + -1.3
150,924 + ECD_00132 0.21 -2.9
150,986 + ECD_00132 0.28 +3.1
151,069 - ECD_00132 0.38 +1.6
151,104 + ECD_00132 0.42 +1.3
151,277 + ECD_00132 0.62 -2.7
151,277 + ECD_00132 0.62 +1.5
151,277 + ECD_00132 0.62 +2.4
151,277 + ECD_00132 0.62 -1.0
151,277 + ECD_00132 0.62 -0.8
151,278 - ECD_00132 0.62 +2.1
151,278 - ECD_00132 0.62 -0.1
151,489 - ECD_00132 0.87 -1.0
151,594 + +1.2
151,664 + +1.5
151,666 + -1.7
151,666 + -0.5
151,666 + +0.7
151,667 - -0.0
151,667 - +1.7
151,667 - +0.3
151,724 + ECD_00133 0.14 +1.2
151,835 + ECD_00133 0.28 -0.7
151,897 - ECD_00133 0.36 -2.0
151,902 + ECD_00133 0.37 -0.5
151,903 - ECD_00133 0.37 -1.8
151,951 - ECD_00133 0.43 -1.4
151,958 - ECD_00133 0.44 +2.0
151,996 - ECD_00133 0.48 +0.7
151,996 - ECD_00133 0.48 -0.2
152,047 - ECD_00133 0.55 +1.0
152,138 - ECD_00133 0.66 +0.9
152,190 + ECD_00133 0.73 +0.6
152,191 - ECD_00133 0.73 +1.9
152,191 - ECD_00133 0.73 -1.5
152,191 - ECD_00133 0.73 -2.8
152,292 - ECD_00133 0.86 -0.9
152,325 - ECD_00133 0.90 +1.9
152,361 - -1.0
152,369 + -1.3
152,445 + -0.5
152,475 - +1.9
152,481 + -1.4
152,516 + -0.6
152,516 + -1.5
152,517 - +1.9
152,569 + +0.3
152,570 - -0.7
152,577 + +1.1
152,594 - +1.3

Or see this region's nucleotide sequence