Experiment: P2_phage_0.5625_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00081 and ECD_00082 are separated by 601 nucleotides ECD_00082 and ECD_00083 are separated by 1 nucleotides ECD_00083 and ECD_00084 overlap by 4 nucleotides
ECD_00081: ECD_00081 - transcriptional repressor-activator for carbon metabolism, at 90,833 to 91,837
_00081
ECD_00082: ECD_00082 - RsmH methytransferase inhibitor, at 92,439 to 92,897
_00082
ECD_00083: ECD_00083 - 16S rRNA m(4)C1402 methyltransferase, SAM-dependent, at 92,899 to 93,840
_00083
ECD_00084: ECD_00084 - membrane bound cell division leucine zipper septum protein, at 93,837 to 94,202
_00084
Position (kb)
92
93 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 91.478 kb on + strand, within ECD_00081 at 91.490 kb on + strand, within ECD_00081 at 91.490 kb on + strand, within ECD_00081 at 91.677 kb on + strand, within ECD_00081 at 91.677 kb on + strand, within ECD_00081 at 91.795 kb on + strand at 91.801 kb on + strand at 91.832 kb on - strand at 91.832 kb on - strand at 91.836 kb on - strand at 91.852 kb on + strand at 91.936 kb on + strand at 91.937 kb on - strand at 91.940 kb on - strand at 91.940 kb on - strand at 91.946 kb on - strand at 92.000 kb on + strand at 92.000 kb on + strand at 92.000 kb on + strand at 92.035 kb on + strand at 92.147 kb on + strand at 92.147 kb on + strand at 92.148 kb on - strand at 92.148 kb on - strand at 92.187 kb on - strand at 92.188 kb on + strand at 92.204 kb on + strand at 92.255 kb on + strand at 92.267 kb on + strand at 92.422 kb on + strand at 92.671 kb on + strand, within ECD_00082 at 92.671 kb on + strand, within ECD_00082 at 92.895 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI remove 91,478 + ECD_00081 0.64 +1.1 91,490 + ECD_00081 0.65 -0.5 91,490 + ECD_00081 0.65 -2.7 91,677 + ECD_00081 0.84 +1.1 91,677 + ECD_00081 0.84 +0.5 91,795 + -0.9 91,801 + -1.6 91,832 - -0.5 91,832 - -0.8 91,836 - -2.0 91,852 + +1.9 91,936 + +1.5 91,937 - -2.3 91,940 - +2.1 91,940 - -0.1 91,946 - +0.2 92,000 + +0.5 92,000 + -0.0 92,000 + -1.7 92,035 + +1.7 92,147 + -2.5 92,147 + -2.9 92,148 - -1.2 92,148 - -0.7 92,187 - -2.9 92,188 + +0.3 92,204 + -1.7 92,255 + +0.5 92,267 + +0.5 92,422 + -1.2 92,671 + ECD_00082 0.51 +2.3 92,671 + ECD_00082 0.51 -1.4 92,895 + -2.1
Or see this region's nucleotide sequence