Strain Fitness in Escherichia coli BL21 around ECD_00050

Experiment: P2_phage_0.5625_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00049 and ECD_00050 are separated by 107 nucleotidesECD_00050 and ECD_00051 overlap by 8 nucleotides ECD_00049: ECD_00049 - putative MFS sugar transporter; membrane protein, at 50,003 to 51,334 _00049 ECD_00050: ECD_00050 - potassium-efflux system ancillary protein for KefC, glutathione-regulated; quinone oxidoreductase, FMN-dependent, at 51,442 to 51,972 _00050 ECD_00051: ECD_00051 - potassium:proton antiporter, at 51,965 to 53,827 _00051 Position (kb) 51 52Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 50.456 kb on + strand, within ECD_00049at 50.457 kb on - strand, within ECD_00049at 50.457 kb on - strand, within ECD_00049at 50.643 kb on + strand, within ECD_00049at 50.644 kb on - strand, within ECD_00049at 50.866 kb on + strand, within ECD_00049at 50.878 kb on + strand, within ECD_00049at 50.878 kb on + strand, within ECD_00049at 50.890 kb on + strand, within ECD_00049at 51.012 kb on + strand, within ECD_00049at 51.033 kb on - strand, within ECD_00049at 51.074 kb on + strand, within ECD_00049at 51.098 kb on + strand, within ECD_00049at 51.127 kb on + strand, within ECD_00049at 51.128 kb on - strand, within ECD_00049at 51.191 kb on + strand, within ECD_00049at 51.213 kb on + strandat 51.304 kb on + strandat 51.370 kb on - strandat 51.391 kb on + strandat 51.391 kb on + strandat 51.392 kb on - strandat 51.393 kb on + strandat 51.393 kb on + strandat 51.399 kb on + strandat 51.438 kb on - strandat 51.438 kb on - strandat 51.442 kb on - strandat 51.442 kb on - strandat 51.457 kb on + strandat 51.556 kb on + strand, within ECD_00050at 51.841 kb on + strand, within ECD_00050at 51.888 kb on + strand, within ECD_00050at 51.888 kb on + strand, within ECD_00050at 51.889 kb on - strand, within ECD_00050at 51.889 kb on - strand, within ECD_00050at 51.928 kb on + strandat 51.928 kb on + strandat 51.928 kb on + strandat 51.928 kb on + strandat 51.929 kb on - strandat 51.929 kb on - strandat 51.929 kb on - strandat 51.930 kb on + strandat 51.930 kb on + strandat 51.930 kb on + strandat 51.930 kb on + strandat 51.930 kb on + strandat 51.930 kb on + strandat 51.930 kb on + strandat 51.931 kb on - strandat 51.976 kb on + strandat 51.977 kb on - strandat 51.998 kb on + strandat 52.168 kb on + strand, within ECD_00051at 52.168 kb on + strand, within ECD_00051at 52.566 kb on - strand, within ECD_00051at 52.566 kb on - strand, within ECD_00051at 52.621 kb on + strand, within ECD_00051at 52.768 kb on + strand, within ECD_00051at 52.768 kb on + strand, within ECD_00051

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Per-strain Table

Position Strand Gene LocusTag Fraction P2_phage_0.5625_MOI
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50,456 + ECD_00049 0.34 -3.2
50,457 - ECD_00049 0.34 -1.9
50,457 - ECD_00049 0.34 +1.0
50,643 + ECD_00049 0.48 -1.0
50,644 - ECD_00049 0.48 +3.0
50,866 + ECD_00049 0.65 +0.4
50,878 + ECD_00049 0.66 -3.4
50,878 + ECD_00049 0.66 +0.8
50,890 + ECD_00049 0.67 -2.2
51,012 + ECD_00049 0.76 -0.1
51,033 - ECD_00049 0.77 +0.8
51,074 + ECD_00049 0.80 +2.2
51,098 + ECD_00049 0.82 +0.6
51,127 + ECD_00049 0.84 -3.2
51,128 - ECD_00049 0.84 -2.0
51,191 + ECD_00049 0.89 -3.3
51,213 + -2.1
51,304 + +0.6
51,370 - -1.2
51,391 + +2.3
51,391 + -0.7
51,392 - -1.7
51,393 + -0.4
51,393 + +0.9
51,399 + +0.3
51,438 - -1.3
51,438 - -1.2
51,442 - -1.3
51,442 - -0.5
51,457 + -1.5
51,556 + ECD_00050 0.21 -1.8
51,841 + ECD_00050 0.75 +0.0
51,888 + ECD_00050 0.84 +2.5
51,888 + ECD_00050 0.84 +0.9
51,889 - ECD_00050 0.84 -1.2
51,889 - ECD_00050 0.84 +0.8
51,928 + +2.6
51,928 + +1.6
51,928 + -0.2
51,928 + +1.7
51,929 - +3.1
51,929 - -0.1
51,929 - +2.1
51,930 + +1.6
51,930 + -2.1
51,930 + +0.4
51,930 + +2.1
51,930 + +0.3
51,930 + +0.5
51,930 + +0.8
51,931 - +1.7
51,976 + +2.3
51,977 - -1.0
51,998 + -0.6
52,168 + ECD_00051 0.11 +2.3
52,168 + ECD_00051 0.11 +0.3
52,566 - ECD_00051 0.32 -0.2
52,566 - ECD_00051 0.32 +0.4
52,621 + ECD_00051 0.35 +1.7
52,768 + ECD_00051 0.43 -0.6
52,768 + ECD_00051 0.43 +0.6

Or see this region's nucleotide sequence