Experiment: m.b. Carbenicillin 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21300 and CA264_21305 are separated by 130 nucleotides CA264_21305 and CA264_21310 are separated by 190 nucleotides CA264_21310 and CA264_21315 are separated by 82 nucleotides CA264_21315 and CA264_21320 are separated by 194 nucleotides
CA264_21300: CA264_21300 - hypothetical protein, at 124,869 to 125,432
_21300
CA264_21305: CA264_21305 - hypothetical protein, at 125,563 to 125,895
_21305
CA264_21310: CA264_21310 - hypothetical protein, at 126,086 to 126,292
_21310
CA264_21315: CA264_21315 - four-helix bundle copper-binding protein, at 126,375 to 126,734
_21315
CA264_21320: CA264_21320 - hypothetical protein, at 126,929 to 127,609
_21320
Position (kb) 126
127 Strain fitness (log2 ratio) -2
-1
0
1
2 at 125.386 kb on - strand at 125.493 kb on + strand at 125.493 kb on + strand at 125.497 kb on - strand at 125.499 kb on - strand at 125.501 kb on + strand at 125.502 kb on - strand at 125.502 kb on - strand at 125.502 kb on - strand at 125.656 kb on - strand, within CA264_21305 at 125.716 kb on - strand, within CA264_21305 at 125.754 kb on + strand, within CA264_21305 at 125.794 kb on - strand, within CA264_21305 at 125.884 kb on - strand at 125.894 kb on - strand at 126.021 kb on - strand at 126.044 kb on - strand at 126.218 kb on + strand, within CA264_21310 at 126.219 kb on - strand, within CA264_21310 at 126.339 kb on - strand at 126.374 kb on + strand at 126.375 kb on - strand at 126.455 kb on - strand, within CA264_21315 at 126.534 kb on - strand, within CA264_21315 at 126.535 kb on + strand, within CA264_21315 at 126.535 kb on + strand, within CA264_21315 at 126.536 kb on - strand, within CA264_21315 at 126.615 kb on - strand, within CA264_21315 at 126.615 kb on - strand, within CA264_21315 at 126.615 kb on - strand, within CA264_21315 at 126.647 kb on - strand, within CA264_21315 at 126.733 kb on - strand at 126.834 kb on + strand at 126.834 kb on + strand at 126.835 kb on - strand at 126.874 kb on - strand at 126.899 kb on + strand at 126.946 kb on + strand at 127.075 kb on + strand, within CA264_21320 at 127.080 kb on + strand, within CA264_21320 at 127.094 kb on - strand, within CA264_21320 at 127.197 kb on + strand, within CA264_21320 at 127.198 kb on - strand, within CA264_21320 at 127.205 kb on + strand, within CA264_21320 at 127.206 kb on - strand, within CA264_21320 at 127.206 kb on - strand, within CA264_21320 at 127.293 kb on + strand, within CA264_21320 at 127.376 kb on - strand, within CA264_21320 at 127.376 kb on - strand, within CA264_21320 at 127.376 kb on - strand, within CA264_21320 at 127.420 kb on + strand, within CA264_21320 at 127.421 kb on - strand, within CA264_21320 at 127.446 kb on + strand, within CA264_21320 at 127.542 kb on + strand at 127.632 kb on + strand at 127.633 kb on - strand at 127.633 kb on - strand at 127.633 kb on - strand at 127.655 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0004 mg/ml remove 125,386 - -0.2 125,493 + +0.2 125,493 + +2.1 125,497 - +0.4 125,499 - +1.5 125,501 + +0.1 125,502 - -0.5 125,502 - -0.3 125,502 - +1.5 125,656 - CA264_21305 0.28 +2.4 125,716 - CA264_21305 0.46 -0.3 125,754 + CA264_21305 0.57 -0.9 125,794 - CA264_21305 0.69 -0.9 125,884 - +1.1 125,894 - -0.5 126,021 - +0.3 126,044 - -0.7 126,218 + CA264_21310 0.64 -0.4 126,219 - CA264_21310 0.64 -0.4 126,339 - -0.9 126,374 + -0.2 126,375 - -0.5 126,455 - CA264_21315 0.22 -0.5 126,534 - CA264_21315 0.44 -1.2 126,535 + CA264_21315 0.44 -1.4 126,535 + CA264_21315 0.44 +0.1 126,536 - CA264_21315 0.45 -1.9 126,615 - CA264_21315 0.67 +0.2 126,615 - CA264_21315 0.67 +0.4 126,615 - CA264_21315 0.67 +0.3 126,647 - CA264_21315 0.76 -0.2 126,733 - -1.4 126,834 + -1.9 126,834 + -0.9 126,835 - +0.8 126,874 - +1.0 126,899 + -1.0 126,946 + -0.9 127,075 + CA264_21320 0.21 -0.5 127,080 + CA264_21320 0.22 -1.2 127,094 - CA264_21320 0.24 -1.0 127,197 + CA264_21320 0.39 -1.7 127,198 - CA264_21320 0.40 -0.4 127,205 + CA264_21320 0.41 -0.5 127,206 - CA264_21320 0.41 -0.5 127,206 - CA264_21320 0.41 +0.4 127,293 + CA264_21320 0.53 -0.5 127,376 - CA264_21320 0.66 -2.7 127,376 - CA264_21320 0.66 +0.2 127,376 - CA264_21320 0.66 -0.7 127,420 + CA264_21320 0.72 -1.2 127,421 - CA264_21320 0.72 -0.5 127,446 + CA264_21320 0.76 -1.3 127,542 + +0.1 127,632 + -0.5 127,633 - -0.3 127,633 - -0.5 127,633 - +0.1 127,655 - -0.5
Or see this region's nucleotide sequence