Experiment: m.b. Carbenicillin 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19530 and CA264_19535 are separated by 4 nucleotides CA264_19535 and CA264_19540 are separated by 178 nucleotides CA264_19540 and CA264_19545 are separated by 103 nucleotides
CA264_19530: CA264_19530 - hypothetical protein, at 4,513,091 to 4,513,534
_19530
CA264_19535: CA264_19535 - hypothetical protein, at 4,513,539 to 4,514,108
_19535
CA264_19540: CA264_19540 - hypothetical protein, at 4,514,287 to 4,515,126
_19540
CA264_19545: CA264_19545 - oxidoreductase, at 4,515,230 to 4,516,123
_19545
Position (kb)
4514
4515
4516 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4513.289 kb on + strand, within CA264_19530 at 4513.290 kb on - strand, within CA264_19530 at 4513.290 kb on - strand, within CA264_19530 at 4513.290 kb on - strand, within CA264_19530 at 4513.290 kb on - strand, within CA264_19530 at 4513.296 kb on + strand, within CA264_19530 at 4513.296 kb on + strand, within CA264_19530 at 4513.297 kb on - strand, within CA264_19530 at 4513.297 kb on - strand, within CA264_19530 at 4513.300 kb on - strand, within CA264_19530 at 4513.483 kb on - strand, within CA264_19530 at 4513.527 kb on + strand at 4513.527 kb on + strand at 4513.527 kb on + strand at 4513.564 kb on + strand at 4513.564 kb on + strand at 4513.677 kb on - strand, within CA264_19535 at 4513.677 kb on - strand, within CA264_19535 at 4513.732 kb on + strand, within CA264_19535 at 4513.733 kb on - strand, within CA264_19535 at 4513.802 kb on + strand, within CA264_19535 at 4513.803 kb on - strand, within CA264_19535 at 4513.833 kb on + strand, within CA264_19535 at 4513.850 kb on + strand, within CA264_19535 at 4513.979 kb on + strand, within CA264_19535 at 4513.979 kb on + strand, within CA264_19535 at 4514.043 kb on + strand, within CA264_19535 at 4514.043 kb on + strand, within CA264_19535 at 4514.150 kb on + strand at 4514.165 kb on + strand at 4514.209 kb on - strand at 4514.244 kb on + strand at 4514.284 kb on + strand at 4514.288 kb on + strand at 4514.315 kb on + strand at 4514.345 kb on + strand at 4514.451 kb on + strand, within CA264_19540 at 4514.533 kb on - strand, within CA264_19540 at 4514.534 kb on + strand, within CA264_19540 at 4514.535 kb on - strand, within CA264_19540 at 4514.593 kb on + strand, within CA264_19540 at 4514.645 kb on - strand, within CA264_19540 at 4514.648 kb on + strand, within CA264_19540 at 4514.648 kb on + strand, within CA264_19540 at 4514.649 kb on - strand, within CA264_19540 at 4514.652 kb on + strand, within CA264_19540 at 4514.652 kb on + strand, within CA264_19540 at 4514.653 kb on - strand, within CA264_19540 at 4514.653 kb on - strand, within CA264_19540 at 4514.681 kb on + strand, within CA264_19540 at 4514.701 kb on + strand, within CA264_19540 at 4514.816 kb on + strand, within CA264_19540 at 4514.816 kb on + strand, within CA264_19540 at 4514.816 kb on + strand, within CA264_19540 at 4514.817 kb on - strand, within CA264_19540 at 4514.873 kb on - strand, within CA264_19540 at 4514.925 kb on + strand, within CA264_19540 at 4514.956 kb on - strand, within CA264_19540 at 4514.964 kb on + strand, within CA264_19540 at 4514.964 kb on + strand, within CA264_19540 at 4514.964 kb on + strand, within CA264_19540 at 4514.965 kb on - strand, within CA264_19540 at 4514.976 kb on + strand, within CA264_19540 at 4514.977 kb on - strand, within CA264_19540 at 4515.001 kb on - strand, within CA264_19540 at 4515.001 kb on - strand, within CA264_19540 at 4515.003 kb on + strand, within CA264_19540 at 4515.004 kb on - strand, within CA264_19540 at 4515.012 kb on + strand, within CA264_19540 at 4515.013 kb on - strand, within CA264_19540 at 4515.056 kb on + strand at 4515.057 kb on - strand at 4515.075 kb on + strand at 4515.147 kb on + strand at 4515.148 kb on - strand at 4515.155 kb on + strand at 4515.165 kb on + strand at 4515.165 kb on + strand at 4515.172 kb on - strand at 4515.204 kb on + strand at 4515.213 kb on - strand at 4515.231 kb on + strand at 4515.231 kb on + strand at 4515.248 kb on - strand at 4515.301 kb on - strand at 4515.399 kb on - strand, within CA264_19545 at 4515.505 kb on - strand, within CA264_19545 at 4515.534 kb on + strand, within CA264_19545 at 4515.551 kb on + strand, within CA264_19545 at 4515.568 kb on - strand, within CA264_19545 at 4515.671 kb on + strand, within CA264_19545 at 4515.715 kb on + strand, within CA264_19545 at 4515.774 kb on + strand, within CA264_19545 at 4515.778 kb on + strand, within CA264_19545 at 4515.779 kb on - strand, within CA264_19545 at 4515.824 kb on - strand, within CA264_19545 at 4515.868 kb on - strand, within CA264_19545 at 4515.868 kb on - strand, within CA264_19545 at 4515.868 kb on - strand, within CA264_19545 at 4515.868 kb on - strand, within CA264_19545 at 4515.868 kb on - strand, within CA264_19545 at 4515.873 kb on + strand, within CA264_19545 at 4516.032 kb on + strand, within CA264_19545 at 4516.033 kb on - strand, within CA264_19545 at 4516.035 kb on + strand at 4516.036 kb on - strand at 4516.119 kb on + strand at 4516.119 kb on + strand at 4516.120 kb on - strand at 4516.123 kb on + strand at 4516.124 kb on - strand at 4516.124 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0004 mg/ml remove 4,513,289 + CA264_19530 0.45 +1.2 4,513,290 - CA264_19530 0.45 +0.4 4,513,290 - CA264_19530 0.45 -0.9 4,513,290 - CA264_19530 0.45 +0.7 4,513,290 - CA264_19530 0.45 -1.4 4,513,296 + CA264_19530 0.46 +0.0 4,513,296 + CA264_19530 0.46 -0.2 4,513,297 - CA264_19530 0.46 -0.6 4,513,297 - CA264_19530 0.46 +0.2 4,513,300 - CA264_19530 0.47 -0.5 4,513,483 - CA264_19530 0.88 -0.4 4,513,527 + +1.2 4,513,527 + -0.1 4,513,527 + -0.0 4,513,564 + +0.2 4,513,564 + +0.2 4,513,677 - CA264_19535 0.24 -0.0 4,513,677 - CA264_19535 0.24 -0.9 4,513,732 + CA264_19535 0.34 +0.0 4,513,733 - CA264_19535 0.34 -0.3 4,513,802 + CA264_19535 0.46 -0.3 4,513,803 - CA264_19535 0.46 +0.0 4,513,833 + CA264_19535 0.52 -1.0 4,513,850 + CA264_19535 0.55 +0.3 4,513,979 + CA264_19535 0.77 -0.6 4,513,979 + CA264_19535 0.77 +2.2 4,514,043 + CA264_19535 0.88 +0.7 4,514,043 + CA264_19535 0.88 +0.1 4,514,150 + +0.6 4,514,165 + -0.5 4,514,209 - -0.1 4,514,244 + -0.2 4,514,284 + +0.1 4,514,288 + -0.1 4,514,315 + -0.5 4,514,345 + -2.4 4,514,451 + CA264_19540 0.20 -0.7 4,514,533 - CA264_19540 0.29 -0.5 4,514,534 + CA264_19540 0.29 +1.7 4,514,535 - CA264_19540 0.30 -0.0 4,514,593 + CA264_19540 0.36 +0.2 4,514,645 - CA264_19540 0.43 -0.2 4,514,648 + CA264_19540 0.43 -0.3 4,514,648 + CA264_19540 0.43 +0.5 4,514,649 - CA264_19540 0.43 +0.7 4,514,652 + CA264_19540 0.43 -0.0 4,514,652 + CA264_19540 0.43 +0.2 4,514,653 - CA264_19540 0.44 -0.6 4,514,653 - CA264_19540 0.44 +0.2 4,514,681 + CA264_19540 0.47 +1.2 4,514,701 + CA264_19540 0.49 +0.0 4,514,816 + CA264_19540 0.63 -0.2 4,514,816 + CA264_19540 0.63 +0.0 4,514,816 + CA264_19540 0.63 -1.3 4,514,817 - CA264_19540 0.63 -0.1 4,514,873 - CA264_19540 0.70 +0.7 4,514,925 + CA264_19540 0.76 -0.5 4,514,956 - CA264_19540 0.80 -0.6 4,514,964 + CA264_19540 0.81 +0.2 4,514,964 + CA264_19540 0.81 -0.1 4,514,964 + CA264_19540 0.81 +0.4 4,514,965 - CA264_19540 0.81 -0.8 4,514,976 + CA264_19540 0.82 +0.8 4,514,977 - CA264_19540 0.82 -1.4 4,515,001 - CA264_19540 0.85 +0.3 4,515,001 - CA264_19540 0.85 +1.8 4,515,003 + CA264_19540 0.85 +0.5 4,515,004 - CA264_19540 0.85 +0.6 4,515,012 + CA264_19540 0.86 +0.6 4,515,013 - CA264_19540 0.86 +0.0 4,515,056 + +1.5 4,515,057 - -0.4 4,515,075 + +1.5 4,515,147 + +0.7 4,515,148 - -0.4 4,515,155 + -0.2 4,515,165 + +0.5 4,515,165 + -1.2 4,515,172 - +0.5 4,515,204 + +0.5 4,515,213 - -0.1 4,515,231 + +0.7 4,515,231 + +0.4 4,515,248 - -0.0 4,515,301 - +0.2 4,515,399 - CA264_19545 0.19 -0.2 4,515,505 - CA264_19545 0.31 -0.6 4,515,534 + CA264_19545 0.34 +0.3 4,515,551 + CA264_19545 0.36 +1.7 4,515,568 - CA264_19545 0.38 -0.1 4,515,671 + CA264_19545 0.49 +1.7 4,515,715 + CA264_19545 0.54 +0.8 4,515,774 + CA264_19545 0.61 +0.2 4,515,778 + CA264_19545 0.61 -2.5 4,515,779 - CA264_19545 0.61 +0.4 4,515,824 - CA264_19545 0.66 +0.1 4,515,868 - CA264_19545 0.71 +2.5 4,515,868 - CA264_19545 0.71 +0.1 4,515,868 - CA264_19545 0.71 +1.7 4,515,868 - CA264_19545 0.71 +0.4 4,515,868 - CA264_19545 0.71 +0.9 4,515,873 + CA264_19545 0.72 +0.2 4,516,032 + CA264_19545 0.90 +1.2 4,516,033 - CA264_19545 0.90 -0.9 4,516,035 + -0.1 4,516,036 - +0.8 4,516,119 + +0.4 4,516,119 + +1.6 4,516,120 - +0.4 4,516,123 + +0.5 4,516,124 - +0.5 4,516,124 - -0.1
Or see this region's nucleotide sequence