Experiment: m.b. Carbenicillin 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18700 and CA264_18705 are separated by 93 nucleotides CA264_18705 and CA264_18710 are separated by 169 nucleotides CA264_18710 and CA264_18715 overlap by 8 nucleotides CA264_18715 and CA264_18720 are separated by 116 nucleotides CA264_18720 and CA264_18725 are separated by 227 nucleotides
CA264_18700: CA264_18700 - cytochrome C biogenesis protein, at 4,342,488 to 4,345,085
_18700
CA264_18705: CA264_18705 - cytochrome C biogenesis protein, at 4,345,179 to 4,345,604
_18705
CA264_18710: CA264_18710 - hypothetical protein, at 4,345,774 to 4,346,034
_18710
CA264_18715: CA264_18715 - ABC transporter permease, at 4,346,027 to 4,346,692
_18715
CA264_18720: CA264_18720 - ABC transporter permease, at 4,346,809 to 4,347,450
_18720
CA264_18725: CA264_18725 - phosphate transport system regulatory protein PhoU, at 4,347,678 to 4,348,403
_18725
Position (kb)
4346
4347 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4345.180 kb on + strand at 4345.615 kb on + strand at 4345.624 kb on + strand at 4345.631 kb on - strand at 4345.631 kb on - strand at 4345.631 kb on - strand at 4345.643 kb on + strand at 4345.749 kb on + strand at 4345.755 kb on + strand at 4345.755 kb on + strand at 4345.757 kb on + strand at 4346.043 kb on - strand at 4346.697 kb on - strand at 4346.704 kb on + strand at 4346.708 kb on + strand at 4346.785 kb on + strand at 4346.785 kb on + strand at 4346.785 kb on + strand at 4346.786 kb on - strand at 4346.796 kb on + strand at 4346.811 kb on - strand at 4347.538 kb on + strand at 4347.660 kb on + strand at 4347.671 kb on - strand at 4347.674 kb on + strand at 4347.674 kb on + strand at 4347.675 kb on - strand at 4347.676 kb on + strand at 4347.679 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0004 mg/ml remove 4,345,180 + +0.4 4,345,615 + -1.9 4,345,624 + -0.6 4,345,631 - +0.2 4,345,631 - -2.4 4,345,631 - -0.9 4,345,643 + -1.0 4,345,749 + -2.2 4,345,755 + -2.9 4,345,755 + -2.1 4,345,757 + -0.4 4,346,043 - -0.2 4,346,697 - +0.5 4,346,704 + +0.7 4,346,708 + +0.4 4,346,785 + -1.4 4,346,785 + -0.6 4,346,785 + -0.6 4,346,786 - +0.3 4,346,796 + -2.8 4,346,811 - +0.0 4,347,538 + +1.9 4,347,660 + -0.4 4,347,671 - -1.3 4,347,674 + +1.6 4,347,674 + -0.4 4,347,675 - +0.0 4,347,676 + -0.1 4,347,679 + +0.2
Or see this region's nucleotide sequence