Experiment: m.b. Carbenicillin 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03775 and CA264_03780 are separated by 104 nucleotides CA264_03780 and CA264_03785 are separated by 114 nucleotides CA264_03785 and CA264_03790 are separated by 44 nucleotides
CA264_03775: CA264_03775 - hypothetical protein, at 885,150 to 886,034
_03775
CA264_03780: CA264_03780 - diacylglycerol kinase, at 886,139 to 887,020
_03780
CA264_03785: CA264_03785 - translation initiation factor, at 887,135 to 887,482
_03785
CA264_03790: CA264_03790 - hypothetical protein, at 887,527 to 887,961
_03790
Position (kb) 886
887
888 Strain fitness (log2 ratio) -1
0
1 at 885.140 kb on + strand at 885.167 kb on + strand at 885.196 kb on + strand at 885.309 kb on + strand, within CA264_03775 at 885.370 kb on + strand, within CA264_03775 at 885.681 kb on - strand, within CA264_03775 at 885.752 kb on - strand, within CA264_03775 at 885.752 kb on - strand, within CA264_03775 at 885.752 kb on - strand, within CA264_03775 at 885.755 kb on - strand, within CA264_03775 at 885.755 kb on - strand, within CA264_03775 at 885.755 kb on - strand, within CA264_03775 at 885.756 kb on + strand, within CA264_03775 at 885.756 kb on + strand, within CA264_03775 at 885.757 kb on - strand, within CA264_03775 at 885.757 kb on - strand, within CA264_03775 at 885.757 kb on - strand, within CA264_03775 at 885.757 kb on - strand, within CA264_03775 at 885.765 kb on - strand, within CA264_03775 at 885.829 kb on - strand, within CA264_03775 at 885.843 kb on + strand, within CA264_03775 at 885.843 kb on + strand, within CA264_03775 at 885.843 kb on + strand, within CA264_03775 at 885.844 kb on - strand, within CA264_03775 at 885.844 kb on - strand, within CA264_03775 at 885.844 kb on - strand, within CA264_03775 at 885.845 kb on + strand, within CA264_03775 at 885.845 kb on + strand, within CA264_03775 at 885.962 kb on - strand at 886.033 kb on - strand at 886.049 kb on + strand at 886.087 kb on - strand at 886.087 kb on - strand at 886.088 kb on + strand at 887.078 kb on + strand at 887.079 kb on - strand at 887.079 kb on - strand at 887.093 kb on + strand at 887.094 kb on - strand at 887.105 kb on + strand at 887.107 kb on + strand at 887.108 kb on - strand at 887.172 kb on + strand, within CA264_03785 at 887.198 kb on + strand, within CA264_03785 at 887.198 kb on + strand, within CA264_03785 at 887.199 kb on - strand, within CA264_03785 at 887.295 kb on + strand, within CA264_03785 at 887.431 kb on - strand, within CA264_03785 at 887.459 kb on - strand at 887.511 kb on + strand at 887.597 kb on - strand, within CA264_03790 at 887.635 kb on + strand, within CA264_03790 at 887.636 kb on - strand, within CA264_03790 at 887.708 kb on + strand, within CA264_03790 at 887.732 kb on + strand, within CA264_03790 at 887.824 kb on + strand, within CA264_03790 at 887.824 kb on + strand, within CA264_03790 at 887.904 kb on - strand, within CA264_03790 at 887.904 kb on - strand, within CA264_03790 at 887.918 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0004 mg/ml remove 885,140 + +1.4 885,167 + -0.1 885,196 + +0.1 885,309 + CA264_03775 0.18 +0.3 885,370 + CA264_03775 0.25 +0.1 885,681 - CA264_03775 0.60 -0.9 885,752 - CA264_03775 0.68 -0.7 885,752 - CA264_03775 0.68 +0.3 885,752 - CA264_03775 0.68 +0.3 885,755 - CA264_03775 0.68 -0.1 885,755 - CA264_03775 0.68 -1.2 885,755 - CA264_03775 0.68 -0.0 885,756 + CA264_03775 0.68 +0.3 885,756 + CA264_03775 0.68 -0.0 885,757 - CA264_03775 0.69 -0.1 885,757 - CA264_03775 0.69 +0.9 885,757 - CA264_03775 0.69 -0.5 885,757 - CA264_03775 0.69 -1.1 885,765 - CA264_03775 0.69 -0.6 885,829 - CA264_03775 0.77 -0.2 885,843 + CA264_03775 0.78 -0.1 885,843 + CA264_03775 0.78 -0.2 885,843 + CA264_03775 0.78 -0.9 885,844 - CA264_03775 0.78 +0.5 885,844 - CA264_03775 0.78 +1.4 885,844 - CA264_03775 0.78 -0.1 885,845 + CA264_03775 0.79 -0.9 885,845 + CA264_03775 0.79 -0.1 885,962 - -1.5 886,033 - -0.3 886,049 + -0.1 886,087 - +0.1 886,087 - -0.2 886,088 + +0.4 887,078 + +0.2 887,079 - -0.1 887,079 - +0.6 887,093 + -0.1 887,094 - -0.7 887,105 + +0.4 887,107 + +0.2 887,108 - -0.1 887,172 + CA264_03785 0.11 +0.7 887,198 + CA264_03785 0.18 -0.3 887,198 + CA264_03785 0.18 +0.3 887,199 - CA264_03785 0.18 -0.5 887,295 + CA264_03785 0.46 +0.3 887,431 - CA264_03785 0.85 -0.0 887,459 - -1.7 887,511 + +0.1 887,597 - CA264_03790 0.16 -0.2 887,635 + CA264_03790 0.25 -1.1 887,636 - CA264_03790 0.25 -0.7 887,708 + CA264_03790 0.42 -1.1 887,732 + CA264_03790 0.47 -0.9 887,824 + CA264_03790 0.68 -0.5 887,824 + CA264_03790 0.68 +0.4 887,904 - CA264_03790 0.87 +1.4 887,904 - CA264_03790 0.87 -0.1 887,918 + +0.5
Or see this region's nucleotide sequence