Experiment: m.b. Carbenicillin 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03005 and CA264_03010 are separated by 6 nucleotides CA264_03010 and CA264_03015 are separated by 360 nucleotides
CA264_03005: CA264_03005 - hypothetical protein, at 689,186 to 690,325
_03005
CA264_03010: CA264_03010 - membrane-bound O-acyltransferase family protein, at 690,332 to 691,807
_03010
CA264_03015: CA264_03015 - hypothetical protein, at 692,168 to 696,712
_03015
Position (kb) 690
691
692 Strain fitness (log2 ratio) -2
-1
0
1
2 at 689.356 kb on - strand, within CA264_03005 at 689.466 kb on + strand, within CA264_03005 at 689.624 kb on + strand, within CA264_03005 at 689.624 kb on - strand, within CA264_03005 at 689.628 kb on + strand, within CA264_03005 at 689.636 kb on - strand, within CA264_03005 at 689.636 kb on - strand, within CA264_03005 at 689.636 kb on - strand, within CA264_03005 at 689.636 kb on - strand, within CA264_03005 at 689.728 kb on - strand, within CA264_03005 at 690.206 kb on - strand, within CA264_03005 at 690.237 kb on - strand at 690.254 kb on - strand at 690.311 kb on + strand at 690.392 kb on - strand at 690.405 kb on + strand at 690.442 kb on + strand at 690.470 kb on + strand at 690.470 kb on + strand at 690.471 kb on - strand at 690.471 kb on - strand at 690.545 kb on + strand, within CA264_03010 at 690.616 kb on + strand, within CA264_03010 at 690.617 kb on - strand, within CA264_03010 at 690.617 kb on - strand, within CA264_03010 at 690.814 kb on + strand, within CA264_03010 at 690.871 kb on + strand, within CA264_03010 at 690.872 kb on - strand, within CA264_03010 at 690.873 kb on + strand, within CA264_03010 at 690.873 kb on + strand, within CA264_03010 at 690.873 kb on + strand, within CA264_03010 at 690.873 kb on + strand, within CA264_03010 at 690.873 kb on + strand, within CA264_03010 at 690.874 kb on - strand, within CA264_03010 at 690.876 kb on + strand, within CA264_03010 at 690.877 kb on - strand, within CA264_03010 at 690.877 kb on - strand, within CA264_03010 at 690.919 kb on - strand, within CA264_03010 at 690.925 kb on - strand, within CA264_03010 at 690.994 kb on - strand, within CA264_03010 at 691.021 kb on + strand, within CA264_03010 at 691.021 kb on + strand, within CA264_03010 at 691.149 kb on + strand, within CA264_03010 at 691.149 kb on + strand, within CA264_03010 at 691.150 kb on - strand, within CA264_03010 at 691.391 kb on + strand, within CA264_03010 at 691.392 kb on - strand, within CA264_03010 at 691.392 kb on - strand, within CA264_03010 at 691.392 kb on - strand, within CA264_03010 at 691.392 kb on - strand, within CA264_03010 at 691.392 kb on - strand, within CA264_03010 at 691.393 kb on + strand, within CA264_03010 at 691.394 kb on - strand, within CA264_03010 at 691.396 kb on + strand, within CA264_03010 at 691.397 kb on - strand, within CA264_03010 at 691.397 kb on - strand, within CA264_03010 at 691.398 kb on + strand, within CA264_03010 at 691.398 kb on + strand, within CA264_03010 at 691.398 kb on + strand, within CA264_03010 at 691.398 kb on + strand, within CA264_03010 at 691.399 kb on - strand, within CA264_03010 at 691.399 kb on - strand, within CA264_03010 at 691.399 kb on - strand, within CA264_03010 at 691.399 kb on - strand, within CA264_03010 at 691.419 kb on + strand, within CA264_03010 at 691.420 kb on - strand, within CA264_03010 at 691.429 kb on + strand, within CA264_03010 at 691.664 kb on - strand at 691.664 kb on - strand at 691.671 kb on + strand at 691.672 kb on - strand at 691.692 kb on + strand at 691.692 kb on + strand at 691.693 kb on - strand at 691.763 kb on + strand at 691.877 kb on - strand at 691.877 kb on - strand at 691.897 kb on - strand at 691.903 kb on - strand at 691.919 kb on - strand at 691.959 kb on - strand at 691.970 kb on + strand at 691.971 kb on - strand at 692.012 kb on + strand at 692.111 kb on + strand at 692.113 kb on + strand at 692.125 kb on + strand at 692.125 kb on + strand at 692.126 kb on - strand at 692.127 kb on + strand at 692.127 kb on + strand at 692.127 kb on + strand at 692.129 kb on + strand at 692.130 kb on - strand at 692.130 kb on - strand at 692.130 kb on - strand at 692.137 kb on + strand at 692.137 kb on + strand at 692.138 kb on - strand at 692.138 kb on - strand at 692.167 kb on + strand at 692.168 kb on - strand at 692.178 kb on - strand at 692.220 kb on + strand at 692.335 kb on - strand at 692.367 kb on - strand at 692.367 kb on - strand at 692.466 kb on - strand at 692.466 kb on - strand at 692.480 kb on + strand at 692.481 kb on - strand at 692.693 kb on + strand, within CA264_03015 at 692.729 kb on + strand, within CA264_03015 at 692.733 kb on + strand, within CA264_03015 at 692.734 kb on - strand, within CA264_03015 at 692.807 kb on + strand, within CA264_03015
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0004 mg/ml remove 689,356 - CA264_03005 0.15 +0.5 689,466 + CA264_03005 0.25 -0.2 689,624 + CA264_03005 0.38 +1.9 689,624 - CA264_03005 0.38 -0.8 689,628 + CA264_03005 0.39 +0.9 689,636 - CA264_03005 0.39 -0.2 689,636 - CA264_03005 0.39 -0.8 689,636 - CA264_03005 0.39 -0.1 689,636 - CA264_03005 0.39 -0.7 689,728 - CA264_03005 0.48 -0.0 690,206 - CA264_03005 0.89 -0.4 690,237 - -0.2 690,254 - -1.0 690,311 + +0.1 690,392 - -0.7 690,405 + -0.1 690,442 + +0.8 690,470 + +0.4 690,470 + -1.1 690,471 - +0.4 690,471 - -0.6 690,545 + CA264_03010 0.14 -0.6 690,616 + CA264_03010 0.19 +0.6 690,617 - CA264_03010 0.19 -1.9 690,617 - CA264_03010 0.19 -0.6 690,814 + CA264_03010 0.33 +1.3 690,871 + CA264_03010 0.37 -0.1 690,872 - CA264_03010 0.37 -0.9 690,873 + CA264_03010 0.37 +0.9 690,873 + CA264_03010 0.37 -1.3 690,873 + CA264_03010 0.37 -0.7 690,873 + CA264_03010 0.37 -0.0 690,873 + CA264_03010 0.37 +0.3 690,874 - CA264_03010 0.37 -0.7 690,876 + CA264_03010 0.37 +0.9 690,877 - CA264_03010 0.37 -0.9 690,877 - CA264_03010 0.37 -0.4 690,919 - CA264_03010 0.40 -1.2 690,925 - CA264_03010 0.40 +0.1 690,994 - CA264_03010 0.45 -0.8 691,021 + CA264_03010 0.47 -0.4 691,021 + CA264_03010 0.47 -0.6 691,149 + CA264_03010 0.55 -0.3 691,149 + CA264_03010 0.55 +0.5 691,150 - CA264_03010 0.55 -0.5 691,391 + CA264_03010 0.72 -0.4 691,392 - CA264_03010 0.72 +0.1 691,392 - CA264_03010 0.72 -0.9 691,392 - CA264_03010 0.72 +0.1 691,392 - CA264_03010 0.72 +1.2 691,392 - CA264_03010 0.72 -1.1 691,393 + CA264_03010 0.72 -0.1 691,394 - CA264_03010 0.72 -0.5 691,396 + CA264_03010 0.72 -0.1 691,397 - CA264_03010 0.72 +0.3 691,397 - CA264_03010 0.72 -1.7 691,398 + CA264_03010 0.72 -0.1 691,398 + CA264_03010 0.72 +2.5 691,398 + CA264_03010 0.72 -0.2 691,398 + CA264_03010 0.72 -0.5 691,399 - CA264_03010 0.72 -0.3 691,399 - CA264_03010 0.72 -0.1 691,399 - CA264_03010 0.72 +0.3 691,399 - CA264_03010 0.72 +0.2 691,419 + CA264_03010 0.74 -0.2 691,420 - CA264_03010 0.74 -0.7 691,429 + CA264_03010 0.74 -0.1 691,664 - -0.1 691,664 - +0.3 691,671 + +0.9 691,672 - +0.3 691,692 + +0.2 691,692 + +1.9 691,693 - -0.6 691,763 + -0.7 691,877 - -0.4 691,877 - -1.4 691,897 - -1.0 691,903 - -0.4 691,919 - -0.0 691,959 - -0.8 691,970 + +0.1 691,971 - -0.2 692,012 + +0.5 692,111 + -1.3 692,113 + +0.5 692,125 + +0.2 692,125 + -0.3 692,126 - -2.0 692,127 + +0.9 692,127 + +0.6 692,127 + -0.4 692,129 + -0.0 692,130 - -2.2 692,130 - -0.3 692,130 - -0.0 692,137 + -1.3 692,137 + +1.2 692,138 - -0.1 692,138 - -1.2 692,167 + -1.1 692,168 - -0.6 692,178 - -1.3 692,220 + +0.3 692,335 - -0.7 692,367 - -0.1 692,367 - -0.4 692,466 - -0.2 692,466 - -0.0 692,480 + +0.1 692,481 - -1.1 692,693 + CA264_03015 0.12 +0.5 692,729 + CA264_03015 0.12 -0.6 692,733 + CA264_03015 0.12 -0.2 692,734 - CA264_03015 0.12 +0.1 692,807 + CA264_03015 0.14 -0.2
Or see this region's nucleotide sequence