Experiment: m.b. Carbenicillin 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02250 and CA264_02255 are separated by 564 nucleotides CA264_02255 and CA264_02260 are separated by 45 nucleotides
CA264_02250: CA264_02250 - peptidase M61, at 520,022 to 521,608
_02250
CA264_02255: CA264_02255 - hypothetical protein, at 522,173 to 522,916
_02255
CA264_02260: CA264_02260 - hypothetical protein, at 522,962 to 525,358
_02260
Position (kb) 522
523 Strain fitness (log2 ratio) -1
0
1 at 521.211 kb on + strand, within CA264_02250 at 521.212 kb on - strand, within CA264_02250 at 521.272 kb on - strand, within CA264_02250 at 521.272 kb on - strand, within CA264_02250 at 521.301 kb on + strand, within CA264_02250 at 521.367 kb on + strand, within CA264_02250 at 521.368 kb on - strand, within CA264_02250 at 521.475 kb on - strand at 521.502 kb on - strand at 521.544 kb on + strand at 521.554 kb on + strand at 521.554 kb on + strand at 521.634 kb on + strand at 521.756 kb on + strand at 521.756 kb on + strand at 521.756 kb on + strand at 521.757 kb on - strand at 521.757 kb on - strand at 521.799 kb on + strand at 521.799 kb on + strand at 521.847 kb on - strand at 521.857 kb on + strand at 521.878 kb on + strand at 521.892 kb on - strand at 521.897 kb on - strand at 521.930 kb on + strand at 521.931 kb on - strand at 521.931 kb on - strand at 521.955 kb on + strand at 521.985 kb on - strand at 521.985 kb on - strand at 522.055 kb on - strand at 522.107 kb on - strand at 522.126 kb on + strand at 522.134 kb on + strand at 522.264 kb on + strand, within CA264_02255 at 522.267 kb on + strand, within CA264_02255 at 522.267 kb on + strand, within CA264_02255 at 522.268 kb on - strand, within CA264_02255 at 522.359 kb on + strand, within CA264_02255 at 522.475 kb on + strand, within CA264_02255 at 522.512 kb on + strand, within CA264_02255 at 522.512 kb on + strand, within CA264_02255 at 522.548 kb on + strand, within CA264_02255 at 522.549 kb on - strand, within CA264_02255 at 522.549 kb on - strand, within CA264_02255 at 522.622 kb on + strand, within CA264_02255 at 522.671 kb on + strand, within CA264_02255 at 522.671 kb on + strand, within CA264_02255 at 522.672 kb on - strand, within CA264_02255 at 522.906 kb on - strand at 523.038 kb on - strand at 523.089 kb on - strand at 523.089 kb on - strand at 523.196 kb on + strand at 523.196 kb on + strand at 523.197 kb on - strand at 523.204 kb on + strand, within CA264_02260 at 523.204 kb on + strand, within CA264_02260 at 523.308 kb on - strand, within CA264_02260 at 523.395 kb on + strand, within CA264_02260 at 523.704 kb on + strand, within CA264_02260 at 523.704 kb on + strand, within CA264_02260 at 523.813 kb on + strand, within CA264_02260
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0004 mg/ml remove 521,211 + CA264_02250 0.75 +1.5 521,212 - CA264_02250 0.75 +0.4 521,272 - CA264_02250 0.79 +0.0 521,272 - CA264_02250 0.79 -0.7 521,301 + CA264_02250 0.81 +0.1 521,367 + CA264_02250 0.85 -1.5 521,368 - CA264_02250 0.85 +0.6 521,475 - +0.9 521,502 - +0.9 521,544 + +0.0 521,554 + -0.8 521,554 + +0.0 521,634 + +1.5 521,756 + -0.2 521,756 + -0.2 521,756 + +0.6 521,757 - +0.9 521,757 - -1.4 521,799 + -0.3 521,799 + -0.2 521,847 - -1.7 521,857 + -1.5 521,878 + +0.1 521,892 - -0.1 521,897 - +0.1 521,930 + +0.2 521,931 - +0.5 521,931 - +0.3 521,955 + +0.2 521,985 - -0.2 521,985 - +0.5 522,055 - +0.5 522,107 - -0.3 522,126 + -0.2 522,134 + +1.2 522,264 + CA264_02255 0.12 -0.2 522,267 + CA264_02255 0.13 +0.8 522,267 + CA264_02255 0.13 -1.7 522,268 - CA264_02255 0.13 +0.6 522,359 + CA264_02255 0.25 -0.3 522,475 + CA264_02255 0.41 +0.5 522,512 + CA264_02255 0.46 -0.6 522,512 + CA264_02255 0.46 +0.3 522,548 + CA264_02255 0.50 +0.6 522,549 - CA264_02255 0.51 -0.7 522,549 - CA264_02255 0.51 +0.5 522,622 + CA264_02255 0.60 +1.1 522,671 + CA264_02255 0.67 +0.4 522,671 + CA264_02255 0.67 +0.3 522,672 - CA264_02255 0.67 +0.3 522,906 - +0.6 523,038 - +0.4 523,089 - +0.9 523,089 - -0.7 523,196 + -1.1 523,196 + -0.0 523,197 - +1.7 523,204 + CA264_02260 0.10 +0.9 523,204 + CA264_02260 0.10 +0.1 523,308 - CA264_02260 0.14 +0.7 523,395 + CA264_02260 0.18 +1.1 523,704 + CA264_02260 0.31 +0.5 523,704 + CA264_02260 0.31 +0.2 523,813 + CA264_02260 0.36 +0.1
Or see this region's nucleotide sequence