Experiment: m.b. Carbenicillin 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02130 and CA264_02135 are separated by 24 nucleotides CA264_02135 and CA264_02140 are separated by 140 nucleotides CA264_02140 and CA264_02145 are separated by 275 nucleotides
CA264_02130: CA264_02130 - pseudouridine synthase, at 491,252 to 491,926
_02130
CA264_02135: CA264_02135 - GNAT family N-acetyltransferase, at 491,951 to 492,520
_02135
CA264_02140: CA264_02140 - hypothetical protein, at 492,661 to 494,739
_02140
CA264_02145: CA264_02145 - beta-ketoacyl-ACP reductase, at 495,015 to 495,761
_02145
Position (kb) 492
493
494
495 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 491.716 kb on - strand, within CA264_02130 at 491.716 kb on - strand, within CA264_02130 at 491.727 kb on - strand, within CA264_02130 at 491.727 kb on - strand, within CA264_02130 at 491.731 kb on + strand, within CA264_02130 at 491.891 kb on + strand at 491.919 kb on + strand at 491.919 kb on + strand at 491.919 kb on + strand at 491.920 kb on - strand at 491.920 kb on - strand at 491.920 kb on - strand at 491.920 kb on - strand at 491.939 kb on - strand at 491.939 kb on - strand at 491.943 kb on - strand at 491.952 kb on + strand at 491.953 kb on - strand at 492.036 kb on + strand, within CA264_02135 at 492.036 kb on + strand, within CA264_02135 at 492.164 kb on + strand, within CA264_02135 at 492.165 kb on - strand, within CA264_02135 at 492.165 kb on - strand, within CA264_02135 at 492.166 kb on + strand, within CA264_02135 at 492.166 kb on + strand, within CA264_02135 at 492.218 kb on + strand, within CA264_02135 at 492.218 kb on + strand, within CA264_02135 at 492.219 kb on - strand, within CA264_02135 at 492.284 kb on + strand, within CA264_02135 at 492.358 kb on - strand, within CA264_02135 at 492.405 kb on + strand, within CA264_02135 at 492.406 kb on - strand, within CA264_02135 at 492.514 kb on + strand at 492.515 kb on - strand at 492.591 kb on - strand at 492.595 kb on + strand at 492.597 kb on + strand at 492.597 kb on + strand at 492.598 kb on - strand at 492.645 kb on - strand at 492.665 kb on + strand at 492.666 kb on - strand at 492.677 kb on + strand at 492.678 kb on - strand at 492.784 kb on - strand at 492.784 kb on - strand at 492.836 kb on + strand at 492.964 kb on - strand, within CA264_02140 at 492.981 kb on - strand, within CA264_02140 at 493.015 kb on + strand, within CA264_02140 at 493.103 kb on + strand, within CA264_02140 at 493.104 kb on - strand, within CA264_02140 at 493.167 kb on - strand, within CA264_02140 at 493.186 kb on + strand, within CA264_02140 at 493.187 kb on - strand, within CA264_02140 at 493.187 kb on - strand, within CA264_02140 at 493.254 kb on - strand, within CA264_02140 at 493.255 kb on + strand, within CA264_02140 at 493.255 kb on + strand, within CA264_02140 at 493.398 kb on - strand, within CA264_02140 at 493.403 kb on - strand, within CA264_02140 at 493.403 kb on - strand, within CA264_02140 at 493.429 kb on + strand, within CA264_02140 at 493.429 kb on + strand, within CA264_02140 at 493.429 kb on + strand, within CA264_02140 at 493.430 kb on - strand, within CA264_02140 at 493.430 kb on - strand, within CA264_02140 at 493.430 kb on - strand, within CA264_02140 at 493.615 kb on + strand, within CA264_02140 at 493.615 kb on + strand, within CA264_02140 at 493.616 kb on - strand, within CA264_02140 at 493.616 kb on - strand, within CA264_02140 at 493.619 kb on + strand, within CA264_02140 at 493.620 kb on - strand, within CA264_02140 at 493.713 kb on - strand, within CA264_02140 at 493.726 kb on - strand, within CA264_02140 at 493.726 kb on - strand, within CA264_02140 at 493.736 kb on - strand, within CA264_02140 at 493.736 kb on - strand, within CA264_02140 at 493.736 kb on - strand, within CA264_02140 at 493.746 kb on + strand, within CA264_02140 at 493.747 kb on - strand, within CA264_02140 at 493.780 kb on + strand, within CA264_02140 at 493.830 kb on + strand, within CA264_02140 at 493.830 kb on + strand, within CA264_02140 at 493.840 kb on + strand, within CA264_02140 at 493.865 kb on + strand, within CA264_02140 at 493.924 kb on + strand, within CA264_02140 at 493.928 kb on + strand, within CA264_02140 at 493.929 kb on - strand, within CA264_02140 at 494.115 kb on - strand, within CA264_02140 at 494.119 kb on + strand, within CA264_02140 at 494.124 kb on + strand, within CA264_02140 at 494.124 kb on + strand, within CA264_02140 at 494.125 kb on - strand, within CA264_02140 at 494.125 kb on - strand, within CA264_02140 at 494.125 kb on - strand, within CA264_02140 at 494.285 kb on + strand, within CA264_02140 at 494.286 kb on - strand, within CA264_02140 at 494.399 kb on + strand, within CA264_02140 at 494.496 kb on + strand, within CA264_02140 at 494.497 kb on - strand, within CA264_02140 at 494.517 kb on + strand, within CA264_02140 at 494.518 kb on - strand, within CA264_02140 at 494.584 kb on + strand at 494.584 kb on + strand at 494.585 kb on - strand at 494.616 kb on - strand at 494.616 kb on - strand at 494.616 kb on - strand at 494.652 kb on - strand at 494.666 kb on + strand at 494.666 kb on + strand at 494.667 kb on - strand at 494.667 kb on - strand at 494.695 kb on + strand at 494.695 kb on + strand at 494.696 kb on - strand at 494.696 kb on - strand at 494.697 kb on + strand at 494.697 kb on + strand at 494.698 kb on - strand at 494.720 kb on - strand at 494.769 kb on + strand at 494.775 kb on - strand at 494.933 kb on + strand at 494.933 kb on + strand at 494.934 kb on - strand at 494.934 kb on - strand at 494.934 kb on - strand at 494.936 kb on - strand at 494.936 kb on - strand at 494.940 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0004 mg/ml remove 491,716 - CA264_02130 0.69 +1.9 491,716 - CA264_02130 0.69 +0.9 491,727 - CA264_02130 0.70 -1.3 491,727 - CA264_02130 0.70 -0.0 491,731 + CA264_02130 0.71 -0.0 491,891 + +2.3 491,919 + -0.3 491,919 + +0.3 491,919 + +0.9 491,920 - -0.1 491,920 - -0.4 491,920 - -1.4 491,920 - -0.1 491,939 - -0.2 491,939 - -0.3 491,943 - -0.4 491,952 + +0.2 491,953 - -0.1 492,036 + CA264_02135 0.15 -0.7 492,036 + CA264_02135 0.15 -0.3 492,164 + CA264_02135 0.37 -0.2 492,165 - CA264_02135 0.38 -1.0 492,165 - CA264_02135 0.38 +0.5 492,166 + CA264_02135 0.38 -0.1 492,166 + CA264_02135 0.38 +0.9 492,218 + CA264_02135 0.47 -0.7 492,218 + CA264_02135 0.47 -0.3 492,219 - CA264_02135 0.47 +0.6 492,284 + CA264_02135 0.58 -2.5 492,358 - CA264_02135 0.71 -1.0 492,405 + CA264_02135 0.80 -1.5 492,406 - CA264_02135 0.80 +0.6 492,514 + -0.4 492,515 - -1.2 492,591 - -0.1 492,595 + +0.4 492,597 + +0.2 492,597 + -0.7 492,598 - -0.3 492,645 - -0.6 492,665 + -2.8 492,666 - -0.9 492,677 + +0.1 492,678 - -0.5 492,784 - +0.7 492,784 - +0.1 492,836 + -0.2 492,964 - CA264_02140 0.15 -0.3 492,981 - CA264_02140 0.15 -0.2 493,015 + CA264_02140 0.17 -0.7 493,103 + CA264_02140 0.21 -0.9 493,104 - CA264_02140 0.21 -0.5 493,167 - CA264_02140 0.24 -1.0 493,186 + CA264_02140 0.25 -1.9 493,187 - CA264_02140 0.25 -1.5 493,187 - CA264_02140 0.25 -1.2 493,254 - CA264_02140 0.29 -0.2 493,255 + CA264_02140 0.29 -1.4 493,255 + CA264_02140 0.29 -0.1 493,398 - CA264_02140 0.35 -0.4 493,403 - CA264_02140 0.36 -0.0 493,403 - CA264_02140 0.36 +0.2 493,429 + CA264_02140 0.37 +1.2 493,429 + CA264_02140 0.37 -1.1 493,429 + CA264_02140 0.37 -1.9 493,430 - CA264_02140 0.37 -0.1 493,430 - CA264_02140 0.37 -0.7 493,430 - CA264_02140 0.37 -1.2 493,615 + CA264_02140 0.46 -0.3 493,615 + CA264_02140 0.46 -0.3 493,616 - CA264_02140 0.46 -1.1 493,616 - CA264_02140 0.46 -1.0 493,619 + CA264_02140 0.46 -0.2 493,620 - CA264_02140 0.46 -0.5 493,713 - CA264_02140 0.51 -1.9 493,726 - CA264_02140 0.51 +0.2 493,726 - CA264_02140 0.51 -0.5 493,736 - CA264_02140 0.52 -1.8 493,736 - CA264_02140 0.52 +0.2 493,736 - CA264_02140 0.52 +0.2 493,746 + CA264_02140 0.52 -0.4 493,747 - CA264_02140 0.52 +0.4 493,780 + CA264_02140 0.54 -0.2 493,830 + CA264_02140 0.56 -1.7 493,830 + CA264_02140 0.56 -0.3 493,840 + CA264_02140 0.57 -0.6 493,865 + CA264_02140 0.58 -0.7 493,924 + CA264_02140 0.61 -0.0 493,928 + CA264_02140 0.61 -0.9 493,929 - CA264_02140 0.61 -1.3 494,115 - CA264_02140 0.70 +1.7 494,119 + CA264_02140 0.70 -0.1 494,124 + CA264_02140 0.70 -0.6 494,124 + CA264_02140 0.70 -0.9 494,125 - CA264_02140 0.70 +0.9 494,125 - CA264_02140 0.70 -2.4 494,125 - CA264_02140 0.70 -0.7 494,285 + CA264_02140 0.78 +0.9 494,286 - CA264_02140 0.78 -1.3 494,399 + CA264_02140 0.84 -1.9 494,496 + CA264_02140 0.88 -0.4 494,497 - CA264_02140 0.88 +0.4 494,517 + CA264_02140 0.89 +1.9 494,518 - CA264_02140 0.89 -0.3 494,584 + +0.5 494,584 + -1.1 494,585 - -0.1 494,616 - +0.2 494,616 - -0.1 494,616 - -0.7 494,652 - -0.8 494,666 + -1.1 494,666 + -0.5 494,667 - -0.7 494,667 - -0.1 494,695 + -0.2 494,695 + -0.7 494,696 - -1.1 494,696 - -0.7 494,697 + +0.3 494,697 + -0.1 494,698 - -1.3 494,720 - -0.8 494,769 + -0.5 494,775 - +0.9 494,933 + -0.9 494,933 + -0.7 494,934 - +0.8 494,934 - -0.3 494,934 - +0.5 494,936 - -0.7 494,936 - -0.5 494,940 - +1.3
Or see this region's nucleotide sequence