Experiment: m.b. Carbenicillin 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01735 and CA264_01740 are separated by 0 nucleotides CA264_01740 and CA264_01745 are separated by 8 nucleotides
CA264_01735: CA264_01735 - oxidoreductase, at 405,363 to 407,105
_01735
CA264_01740: CA264_01740 - proton-translocating NADH-quinone oxidoreductase subunit N, at 407,106 to 408,611
_01740
CA264_01745: CA264_01745 - amidophosphoribosyltransferase, at 408,620 to 410,515
_01745
Position (kb) 407
408
409 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 406.736 kb on + strand, within CA264_01735 at 406.849 kb on - strand, within CA264_01735 at 406.855 kb on + strand, within CA264_01735 at 407.020 kb on + strand at 407.099 kb on - strand at 407.124 kb on + strand at 407.591 kb on + strand, within CA264_01740 at 407.629 kb on - strand, within CA264_01740 at 408.082 kb on + strand, within CA264_01740 at 408.114 kb on + strand, within CA264_01740 at 408.450 kb on + strand, within CA264_01740 at 408.584 kb on - strand at 408.607 kb on + strand at 408.607 kb on + strand at 408.615 kb on + strand at 408.615 kb on + strand at 408.615 kb on + strand at 408.633 kb on + strand at 408.649 kb on + strand at 408.649 kb on + strand at 408.683 kb on + strand at 408.698 kb on + strand at 408.699 kb on - strand at 408.713 kb on + strand at 408.714 kb on - strand at 408.819 kb on - strand, within CA264_01745 at 408.887 kb on + strand, within CA264_01745 at 408.887 kb on + strand, within CA264_01745 at 408.887 kb on + strand, within CA264_01745 at 408.887 kb on + strand, within CA264_01745 at 408.888 kb on - strand, within CA264_01745 at 408.888 kb on - strand, within CA264_01745 at 408.889 kb on + strand, within CA264_01745 at 408.890 kb on - strand, within CA264_01745 at 408.972 kb on - strand, within CA264_01745 at 408.972 kb on - strand, within CA264_01745 at 408.989 kb on + strand, within CA264_01745 at 409.019 kb on - strand, within CA264_01745 at 409.162 kb on + strand, within CA264_01745 at 409.220 kb on + strand, within CA264_01745 at 409.223 kb on + strand, within CA264_01745 at 409.240 kb on + strand, within CA264_01745 at 409.240 kb on + strand, within CA264_01745 at 409.241 kb on - strand, within CA264_01745 at 409.329 kb on - strand, within CA264_01745 at 409.401 kb on - strand, within CA264_01745 at 409.404 kb on - strand, within CA264_01745 at 409.406 kb on + strand, within CA264_01745 at 409.406 kb on + strand, within CA264_01745 at 409.475 kb on + strand, within CA264_01745 at 409.495 kb on + strand, within CA264_01745
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0004 mg/ml remove 406,736 + CA264_01735 0.79 -0.4 406,849 - CA264_01735 0.85 -1.9 406,855 + CA264_01735 0.86 -1.7 407,020 + +0.4 407,099 - -1.6 407,124 + -1.0 407,591 + CA264_01740 0.32 -0.0 407,629 - CA264_01740 0.35 -2.5 408,082 + CA264_01740 0.65 -1.5 408,114 + CA264_01740 0.67 -1.1 408,450 + CA264_01740 0.89 -0.6 408,584 - -1.9 408,607 + +1.3 408,607 + -0.8 408,615 + +0.3 408,615 + -0.0 408,615 + -0.8 408,633 + -0.0 408,649 + -0.9 408,649 + +0.7 408,683 + +0.6 408,698 + -1.0 408,699 - +1.8 408,713 + +4.1 408,714 - -0.0 408,819 - CA264_01745 0.10 -0.3 408,887 + CA264_01745 0.14 +0.9 408,887 + CA264_01745 0.14 -1.0 408,887 + CA264_01745 0.14 -0.4 408,887 + CA264_01745 0.14 +0.3 408,888 - CA264_01745 0.14 -1.9 408,888 - CA264_01745 0.14 -0.4 408,889 + CA264_01745 0.14 +0.1 408,890 - CA264_01745 0.14 -1.4 408,972 - CA264_01745 0.19 -0.6 408,972 - CA264_01745 0.19 -0.8 408,989 + CA264_01745 0.19 -0.6 409,019 - CA264_01745 0.21 -0.7 409,162 + CA264_01745 0.29 -1.0 409,220 + CA264_01745 0.32 -0.4 409,223 + CA264_01745 0.32 +0.2 409,240 + CA264_01745 0.33 +0.1 409,240 + CA264_01745 0.33 -0.0 409,241 - CA264_01745 0.33 -0.7 409,329 - CA264_01745 0.37 +1.4 409,401 - CA264_01745 0.41 -0.1 409,404 - CA264_01745 0.41 +0.3 409,406 + CA264_01745 0.41 -1.0 409,406 + CA264_01745 0.41 -1.0 409,475 + CA264_01745 0.45 -0.1 409,495 + CA264_01745 0.46 -0.6
Or see this region's nucleotide sequence