Experiment: m.b. Carbenicillin 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01685 and CA264_01690 are separated by 206 nucleotides CA264_01690 and CA264_01695 are separated by 15 nucleotides
CA264_01685: CA264_01685 - glutamate racemase, at 395,611 to 396,426
_01685
CA264_01690: CA264_01690 - hypothetical protein, at 396,633 to 397,178
_01690
CA264_01695: CA264_01695 - glutathionylspermidine synthase, at 397,194 to 398,372
_01695
Position (kb) 396
397
398 Strain fitness (log2 ratio) -2
-1
0
1
2 at 396.435 kb on + strand at 396.435 kb on + strand at 396.436 kb on - strand at 396.453 kb on - strand at 396.473 kb on - strand at 396.494 kb on - strand at 396.521 kb on - strand at 396.538 kb on + strand at 396.542 kb on - strand at 396.576 kb on - strand at 396.583 kb on + strand at 396.584 kb on - strand at 396.608 kb on + strand at 396.680 kb on + strand at 396.820 kb on + strand, within CA264_01690 at 396.863 kb on - strand, within CA264_01690 at 396.863 kb on - strand, within CA264_01690 at 396.871 kb on - strand, within CA264_01690 at 397.006 kb on - strand, within CA264_01690 at 397.008 kb on - strand, within CA264_01690 at 397.020 kb on - strand, within CA264_01690 at 397.042 kb on - strand, within CA264_01690 at 397.042 kb on - strand, within CA264_01690 at 397.044 kb on + strand, within CA264_01690 at 397.044 kb on + strand, within CA264_01690 at 397.070 kb on + strand, within CA264_01690 at 397.094 kb on - strand, within CA264_01690 at 397.101 kb on + strand, within CA264_01690 at 397.176 kb on + strand at 397.189 kb on + strand at 397.189 kb on + strand at 397.190 kb on - strand at 397.240 kb on + strand at 397.241 kb on - strand at 397.299 kb on + strand at 397.516 kb on + strand, within CA264_01695 at 397.516 kb on + strand, within CA264_01695 at 397.571 kb on + strand, within CA264_01695 at 397.571 kb on + strand, within CA264_01695 at 397.571 kb on + strand, within CA264_01695 at 397.572 kb on - strand, within CA264_01695 at 397.572 kb on - strand, within CA264_01695 at 397.572 kb on - strand, within CA264_01695 at 397.573 kb on + strand, within CA264_01695 at 397.573 kb on + strand, within CA264_01695 at 397.718 kb on - strand, within CA264_01695 at 397.725 kb on + strand, within CA264_01695 at 397.725 kb on + strand, within CA264_01695 at 397.725 kb on + strand, within CA264_01695 at 397.754 kb on + strand, within CA264_01695 at 397.766 kb on + strand, within CA264_01695 at 397.768 kb on + strand, within CA264_01695 at 397.768 kb on + strand, within CA264_01695 at 397.769 kb on - strand, within CA264_01695 at 397.825 kb on + strand, within CA264_01695 at 397.826 kb on - strand, within CA264_01695 at 397.870 kb on + strand, within CA264_01695 at 397.870 kb on + strand, within CA264_01695 at 397.870 kb on + strand, within CA264_01695 at 397.870 kb on + strand, within CA264_01695 at 397.875 kb on - strand, within CA264_01695 at 397.907 kb on + strand, within CA264_01695 at 397.908 kb on - strand, within CA264_01695 at 397.994 kb on - strand, within CA264_01695 at 398.010 kb on + strand, within CA264_01695 at 398.011 kb on - strand, within CA264_01695 at 398.012 kb on + strand, within CA264_01695 at 398.012 kb on + strand, within CA264_01695 at 398.061 kb on + strand, within CA264_01695 at 398.068 kb on - strand, within CA264_01695 at 398.115 kb on + strand, within CA264_01695 at 398.116 kb on - strand at 398.131 kb on - strand, within CA264_01695 at 398.131 kb on - strand, within CA264_01695 at 398.131 kb on - strand, within CA264_01695 at 398.161 kb on + strand, within CA264_01695
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0004 mg/ml remove 396,435 + +0.5 396,435 + -0.5 396,436 - -1.0 396,453 - +0.5 396,473 - +0.3 396,494 - +0.9 396,521 - -0.6 396,538 + -1.7 396,542 - -1.2 396,576 - +2.3 396,583 + -0.4 396,584 - -0.2 396,608 + +0.7 396,680 + +0.5 396,820 + CA264_01690 0.34 -1.4 396,863 - CA264_01690 0.42 +0.4 396,863 - CA264_01690 0.42 +0.2 396,871 - CA264_01690 0.44 -0.6 397,006 - CA264_01690 0.68 +0.1 397,008 - CA264_01690 0.69 +1.2 397,020 - CA264_01690 0.71 -0.2 397,042 - CA264_01690 0.75 -1.4 397,042 - CA264_01690 0.75 -0.1 397,044 + CA264_01690 0.75 -0.1 397,044 + CA264_01690 0.75 -0.1 397,070 + CA264_01690 0.80 -1.0 397,094 - CA264_01690 0.84 +0.7 397,101 + CA264_01690 0.86 +0.5 397,176 + +0.4 397,189 + +0.2 397,189 + -0.6 397,190 - +0.6 397,240 + -0.0 397,241 - -0.1 397,299 + +1.9 397,516 + CA264_01695 0.27 -0.3 397,516 + CA264_01695 0.27 +0.8 397,571 + CA264_01695 0.32 +0.4 397,571 + CA264_01695 0.32 +0.2 397,571 + CA264_01695 0.32 +0.0 397,572 - CA264_01695 0.32 -0.0 397,572 - CA264_01695 0.32 +0.8 397,572 - CA264_01695 0.32 +1.0 397,573 + CA264_01695 0.32 +0.2 397,573 + CA264_01695 0.32 -1.6 397,718 - CA264_01695 0.44 +0.4 397,725 + CA264_01695 0.45 +0.3 397,725 + CA264_01695 0.45 -0.6 397,725 + CA264_01695 0.45 -0.6 397,754 + CA264_01695 0.47 +0.3 397,766 + CA264_01695 0.49 -0.4 397,768 + CA264_01695 0.49 +0.8 397,768 + CA264_01695 0.49 +0.3 397,769 - CA264_01695 0.49 -0.8 397,825 + CA264_01695 0.54 -0.4 397,826 - CA264_01695 0.54 -1.5 397,870 + CA264_01695 0.57 -0.1 397,870 + CA264_01695 0.57 -0.0 397,870 + CA264_01695 0.57 +1.0 397,870 + CA264_01695 0.57 +0.1 397,875 - CA264_01695 0.58 +0.2 397,907 + CA264_01695 0.60 +0.2 397,908 - CA264_01695 0.61 +1.2 397,994 - CA264_01695 0.68 -0.0 398,010 + CA264_01695 0.69 -1.0 398,011 - CA264_01695 0.69 +0.0 398,012 + CA264_01695 0.69 -1.5 398,012 + CA264_01695 0.69 -0.3 398,061 + CA264_01695 0.74 +1.0 398,068 - CA264_01695 0.74 +0.2 398,115 + CA264_01695 0.78 +0.4 398,116 - -1.0 398,131 - CA264_01695 0.79 -2.7 398,131 - CA264_01695 0.79 -1.4 398,131 - CA264_01695 0.79 -0.0 398,161 + CA264_01695 0.82 +0.2
Or see this region's nucleotide sequence