Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4258

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
4,770,008	-				-0.4
4,770,008	-				-0.3
4,770,008	-				+0.3
4,770,008	-				+0.1
4,770,008	-				+0.9
4,770,068	+				+0.8
4,770,068	+				+0.7
4,770,068	+				-0.6
4,770,069	-				+0.9
4,770,069	-				-0.2
4,770,150	+				+0.7
4,770,150	+				-0.2
4,770,150	+				+0.7
4,770,150	+				+0.4
4,770,151	-				-0.7
4,770,151	-				+0.4
4,770,151	-				-0.2
4,770,181	+				-1.4
4,770,181	+				-1.1
4,770,181	+				+0.5
4,770,182	-				-0.5
4,770,182	-				-0.9
4,770,222	+				+0.3
4,770,222	+				-0.5
4,770,222	+				-1.5
4,770,222	+				-0.5
4,770,222	+				-0.9
4,770,222	+				+0.6
4,770,222	+				-0.9
4,770,222	+				-0.1
4,770,222	+				-1.8
4,770,222	+				-1.9
4,770,222	+				-0.5
4,770,222	+				+0.1
4,770,222	+				+1.0
4,770,223	-				+0.8
4,770,223	-				-0.5
4,770,223	-				+0.2
4,770,223	-				+0.8
4,770,223	-				-0.6
4,770,223	-				-1.6
4,770,223	-				+0.3
4,770,223	-				-0.1
4,770,223	-				-0.1
4,770,223	-				+0.5
4,770,223	-				-0.4
4,770,223	-				-0.2
4,770,223	-				-0.7
4,770,223	-				+0.6
4,770,282	+				+0.5
4,770,282	+		PfGW456L13_4257	0.18	-1.5
4,770,282	+		PfGW456L13_4257	0.18	-0.7
4,770,282	+		PfGW456L13_4257	0.18	+2.1
4,770,283	-		PfGW456L13_4257	0.18	+0.4
4,770,283	-		PfGW456L13_4257	0.18	-0.9
4,770,283	-		PfGW456L13_4257	0.18	+0.2
4,770,283	-		PfGW456L13_4257	0.18	-0.1
4,770,391	+		PfGW456L13_4257	0.33	+0.7
4,770,539	-		PfGW456L13_4257	0.53	+0.1
4,770,539	-		PfGW456L13_4257	0.53	+1.4
4,770,539	-		PfGW456L13_4257	0.53	+0.4
4,770,566	+		PfGW456L13_4257	0.57	-1.2
4,770,566	+		PfGW456L13_4257	0.57	+0.4
4,770,567	-		PfGW456L13_4257	0.57	+0.4
4,770,702	+		PfGW456L13_4257	0.75	+0.4
4,770,702	+		PfGW456L13_4257	0.75	-2.3
4,770,702	+		PfGW456L13_4257	0.75	+0.9
4,770,702	+		PfGW456L13_4257	0.75	+0.3
4,770,703	-		PfGW456L13_4257	0.76	-0.3
4,770,703	-		PfGW456L13_4257	0.76	+0.5
4,770,703	-				-0.1
4,770,703	-		PfGW456L13_4257	0.76	-0.5
4,770,703	-		PfGW456L13_4257	0.76	-0.4
4,770,703	-		PfGW456L13_4257	0.76	+1.5
4,770,703	-		PfGW456L13_4257	0.76	-0.2
4,770,796	+		PfGW456L13_4257	0.88	+0.5
4,770,828	+				+0.3
4,770,829	-				-0.0
4,770,863	+				-0.5
4,770,863	+				-0.1
4,770,863	+				-1.1
4,770,863	+				-1.5
4,770,864	-				+0.6
4,770,864	-				+0.0
4,770,938	+				-0.4
4,770,938	+				-0.3
4,770,939	-				+0.7
4,770,939	-				+0.4
4,770,957	+				-2.6
4,770,991	+				-3.4
4,770,991	+				-1.7
4,770,991	+				-2.6
4,770,992	-				-2.2
4,770,992	-				-1.1
4,771,387	-		PfGW456L13_4258	0.23	-4.0
4,771,387	-		PfGW456L13_4258	0.23	-1.9
4,771,423	+		PfGW456L13_4258	0.25	+2.2
4,771,424	-		PfGW456L13_4258	0.25	-2.2
4,771,424	-		PfGW456L13_4258	0.25	-1.0
4,771,424	-		PfGW456L13_4258	0.25	+0.1
4,771,522	+		PfGW456L13_4258	0.30	-2.5
4,771,523	-		PfGW456L13_4258	0.30	-1.3
4,771,541	-		PfGW456L13_4258	0.31	-2.8
4,771,541	-		PfGW456L13_4258	0.31	-0.4
4,771,541	-		PfGW456L13_4258	0.31	-0.9
4,771,543	+		PfGW456L13_4258	0.31	-2.5
4,771,544	-		PfGW456L13_4258	0.31	-1.4
4,771,544	-		PfGW456L13_4258	0.31	-1.1
4,771,544	-		PfGW456L13_4258	0.31	-1.1
4,771,723	+		PfGW456L13_4258	0.41	-1.5
4,771,724	-		PfGW456L13_4258	0.41	-2.7
4,771,724	-		PfGW456L13_4258	0.41	-2.0
4,771,724	-		PfGW456L13_4258	0.41	-3.9
4,771,886	-		PfGW456L13_4258	0.49	-2.4
4,771,936	+		PfGW456L13_4258	0.52	-1.9
4,771,969	+		PfGW456L13_4258	0.53	-2.5
4,771,999	+		PfGW456L13_4258	0.55	-1.5
4,771,999	+		PfGW456L13_4258	0.55	-2.9
4,771,999	+		PfGW456L13_4258	0.55	-0.7
4,771,999	+		PfGW456L13_4258	0.55	-1.1
4,771,999	+		PfGW456L13_4258	0.55	-2.1
4,772,000	-		PfGW456L13_4258	0.55	-0.4
4,772,000	-		PfGW456L13_4258	0.55	-2.4
4,772,000	-		PfGW456L13_4258	0.55	-1.7
4,772,014	+		PfGW456L13_4258	0.56	-1.8
4,772,086	+		PfGW456L13_4258	0.60	-1.7
4,772,087	-		PfGW456L13_4258	0.60	-0.7
4,772,246	-		PfGW456L13_4258	0.68	-0.5
4,772,598	-		PfGW456L13_4258	0.86	-3.4
4,772,598	-		PfGW456L13_4258	0.86	-2.8
4,772,625	-		PfGW456L13_4258	0.88	-1.8
4,772,706	+				-2.4
4,772,707	-				-1.1
4,772,771	-				-1.9
4,772,771	-				-3.9
4,772,879	+				-1.4
4,772,880	-				-0.4
4,772,880	-				+0.9
4,772,880	-				+0.0
4,773,098	-		PfGW456L13_4259	0.36	+0.9
4,773,335	-		PfGW456L13_4259	0.89	+0.5
4,773,559	-		PfGW456L13_4260	0.37	+0.4
4,773,568	+		PfGW456L13_4260	0.39	-0.4
4,773,568	+		PfGW456L13_4260	0.39	+0.8
4,773,568	+		PfGW456L13_4260	0.39	+0.3
4,773,568	+		PfGW456L13_4260	0.39	-0.2
4,773,568	+		PfGW456L13_4260	0.39	+0.3
4,773,568	+		PfGW456L13_4260	0.39	+1.7
4,773,568	+		PfGW456L13_4260	0.39	-1.2
4,773,568	+		PfGW456L13_4260	0.39	-0.2
4,773,568	+		PfGW456L13_4260	0.39	+0.7
4,773,568	+		PfGW456L13_4260	0.39	-0.8
4,773,568	+		PfGW456L13_4260	0.39	+0.0
4,773,569	+		PfGW456L13_4260	0.39	+0.7
4,773,569	-		PfGW456L13_4260	0.39	+0.3
4,773,569	-		PfGW456L13_4260	0.39	-3.8
4,773,569	-		PfGW456L13_4260	0.39	-0.9
4,773,569	-		PfGW456L13_4260	0.39	+0.2
4,773,569	-		PfGW456L13_4260	0.39	+0.1
4,773,569	-		PfGW456L13_4260	0.39	+0.4
4,773,569	-		PfGW456L13_4260	0.39	-1.1
4,773,569	-		PfGW456L13_4260	0.39	-0.1
4,773,569	-		PfGW456L13_4260	0.39	+0.5
4,773,569	-		PfGW456L13_4260	0.39	+0.5
4,773,569	-		PfGW456L13_4260	0.39	+0.3
4,773,569	-		PfGW456L13_4260	0.39	+0.5
4,773,569	-		PfGW456L13_4260	0.39	+0.1
4,773,569	-		PfGW456L13_4260	0.39	+0.5
4,773,569	-		PfGW456L13_4260	0.39	+1.2
4,773,591	+		PfGW456L13_4260	0.44	+0.5
4,773,591	+		PfGW456L13_4260	0.44	+0.4
4,773,591	+		PfGW456L13_4260	0.44	+0.1
4,773,591	+		PfGW456L13_4260	0.44	-0.4
4,773,591	+		PfGW456L13_4260	0.44	+0.2
4,773,592	-		PfGW456L13_4260	0.44	+2.2
4,773,592	-		PfGW456L13_4260	0.44	-1.0
4,773,592	-		PfGW456L13_4260	0.44	+0.1
4,773,785	+		PfGW456L13_4260	0.84	-0.4
4,773,785	+		PfGW456L13_4260	0.84	+0.6
4,773,786	-		PfGW456L13_4260	0.84	-0.7
4,773,795	-		PfGW456L13_4260	0.86	-0.9
4,773,795	-		PfGW456L13_4260	0.86	+0.5
4,773,795	-		PfGW456L13_4260	0.86	+0.0
4,773,795	-		PfGW456L13_4260	0.86	-0.2