Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4067

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
4,563,916	+		PfGW456L13_4065	0.81	-1.4
4,563,916	+		PfGW456L13_4065	0.81	-1.0
4,563,916	+		PfGW456L13_4065	0.81	-1.6
4,563,954	+		PfGW456L13_4065	0.84	-2.1
4,563,955	-		PfGW456L13_4065	0.84	-0.9
4,563,955	-		PfGW456L13_4065	0.84	-0.9
4,563,958	+		PfGW456L13_4065	0.84	-2.1
4,563,959	-		PfGW456L13_4065	0.84	-1.5
4,563,959	-		PfGW456L13_4065	0.84	-1.4
4,564,221	+				-0.8
4,564,221	+				+0.8
4,564,221	+				-2.4
4,564,221	+				-1.7
4,564,221	+				-1.0
4,564,221	+				-1.5
4,564,335	+		PfGW456L13_4066	0.27	-0.8
4,564,335	+		PfGW456L13_4066	0.27	-0.1
4,564,335	+		PfGW456L13_4066	0.27	+0.3
4,564,335	+		PfGW456L13_4066	0.27	+0.2
4,564,335	+		PfGW456L13_4066	0.27	+0.6
4,564,335	+		PfGW456L13_4066	0.27	-1.0
4,564,335	+		PfGW456L13_4066	0.27	+0.4
4,564,335	+		PfGW456L13_4066	0.27	-0.8
4,564,335	+		PfGW456L13_4066	0.27	-0.8
4,564,336	-		PfGW456L13_4066	0.27	-1.0
4,564,336	-		PfGW456L13_4066	0.27	-0.9
4,564,336	-		PfGW456L13_4066	0.27	-2.1
4,564,336	-		PfGW456L13_4066	0.27	-1.1
4,564,336	-		PfGW456L13_4066	0.27	+0.9
4,564,336	-		PfGW456L13_4066	0.27	-0.5
4,564,336	-		PfGW456L13_4066	0.27	-3.8
4,564,336	-		PfGW456L13_4066	0.27	-1.3
4,564,336	-		PfGW456L13_4066	0.27	-1.2
4,564,336	-		PfGW456L13_4066	0.27	-1.0
4,564,338	+		PfGW456L13_4066	0.27	-2.1
4,564,339	-		PfGW456L13_4066	0.27	-0.8
4,564,564	-		PfGW456L13_4066	0.69	-1.8
4,564,729	-				+0.1
4,564,834	+				+1.4
4,564,834	+				+0.1
4,564,834	+				-1.1
4,564,835	-				-0.6
4,564,835	-				-0.4
4,564,835	-				-0.2
4,564,835	-				+0.6
4,564,835	-				-0.9
4,564,837	+				-0.4
4,564,838	-				+0.8
4,564,838	-				-0.7
4,564,845	-				-3.4
4,564,845	-				-0.0
4,564,874	+				-0.3
4,565,003	+				-1.5
4,565,004	-				-0.8
4,565,004	-				-0.7
4,565,006	+				-1.8
4,565,079	-				-1.1
4,565,256	+		PfGW456L13_4067	0.17	-1.5
4,565,256	+		PfGW456L13_4067	0.17	-3.1
4,565,256	+		PfGW456L13_4067	0.17	-2.7
4,565,256	+		PfGW456L13_4067	0.17	-1.6
4,565,256	+		PfGW456L13_4067	0.17	-0.9
4,565,257	-		PfGW456L13_4067	0.17	-1.1
4,565,257	-		PfGW456L13_4067	0.17	-3.8
4,565,257	-		PfGW456L13_4067	0.17	-3.4
4,565,257	-		PfGW456L13_4067	0.17	-3.8
4,565,333	+		PfGW456L13_4067	0.20	-0.9
4,565,534	+		PfGW456L13_4067	0.28	-2.7
4,565,534	+		PfGW456L13_4067	0.28	-0.4
4,565,535	-		PfGW456L13_4067	0.28	-1.2
4,565,535	-		PfGW456L13_4067	0.28	-0.9
4,565,535	-		PfGW456L13_4067	0.28	-4.6
4,565,631	-		PfGW456L13_4067	0.32	-2.6
4,565,631	-		PfGW456L13_4067	0.32	-2.0
4,565,631	-		PfGW456L13_4067	0.32	-0.8
4,565,631	-		PfGW456L13_4067	0.32	-1.9
4,565,675	+		PfGW456L13_4067	0.34	-1.3
4,565,676	-		PfGW456L13_4067	0.34	-0.3
4,565,676	-		PfGW456L13_4067	0.34	-1.4
4,565,723	+		PfGW456L13_4067	0.36	-0.9
4,565,781	+		PfGW456L13_4067	0.38	-0.8
4,565,781	+		PfGW456L13_4067	0.38	+0.3
4,565,781	+		PfGW456L13_4067	0.38	-1.7
4,565,781	+		PfGW456L13_4067	0.38	-1.0
4,565,782	-		PfGW456L13_4067	0.38	-2.7
4,565,782	-		PfGW456L13_4067	0.38	-2.1
4,565,954	+		PfGW456L13_4067	0.45	-0.1
4,565,954	+		PfGW456L13_4067	0.45	-2.2
4,565,955	-		PfGW456L13_4067	0.45	-1.3
4,566,681	+		PfGW456L13_4067	0.75	-0.8
4,567,130	+				-0.3
4,567,130	+				-0.4
4,567,131	-				-0.5
4,567,338	+				-1.9
4,567,338	+				-1.6
4,567,338	+				-2.3
4,567,339	-				-1.1
4,567,339	-				-0.2
4,567,339	-				-2.0
4,567,339	-				-3.0
4,567,383	+		PfGW456L13_4068	0.26	-3.9
4,567,383	+		PfGW456L13_4068	0.26	-0.9
4,567,383	+		PfGW456L13_4068	0.26	-1.1
4,567,383	+		PfGW456L13_4068	0.26	-1.6
4,567,383	+		PfGW456L13_4068	0.26	-1.4
4,567,383	+		PfGW456L13_4068	0.26	-1.4
4,567,384	-		PfGW456L13_4068	0.26	-1.6
4,567,384	-		PfGW456L13_4068	0.26	-1.2
4,567,384	-		PfGW456L13_4068	0.26	-1.1
4,567,384	-		PfGW456L13_4068	0.26	-2.1
4,567,384	-		PfGW456L13_4068	0.26	-0.8
4,567,384	-		PfGW456L13_4068	0.26	-1.3
4,567,384	-		PfGW456L13_4068	0.26	-1.5
4,567,384	-		PfGW456L13_4068	0.26	-1.2
4,567,384	-		PfGW456L13_4068	0.26	-2.1
4,567,386	-		PfGW456L13_4068	0.27	-2.1
4,567,416	+		PfGW456L13_4068	0.41	-1.1
4,567,690	+		PfGW456L13_4069	0.22	-1.6
4,567,691	-		PfGW456L13_4069	0.23	-0.4
4,567,714	+		PfGW456L13_4069	0.26	-1.1
4,567,714	+		PfGW456L13_4069	0.26	+0.1
4,567,714	+		PfGW456L13_4069	0.26	-2.6
4,567,714	+		PfGW456L13_4069	0.26	-2.4
4,567,714	+		PfGW456L13_4069	0.26	-2.3
4,567,714	+		PfGW456L13_4069	0.26	-3.2
4,567,714	+		PfGW456L13_4069	0.26	-1.9
4,567,714	+		PfGW456L13_4069	0.26	-1.9
4,567,714	+		PfGW456L13_4069	0.26	-1.5
4,567,714	+		PfGW456L13_4069	0.26	-4.1
4,567,714	+		PfGW456L13_4069	0.26	-1.5
4,567,715	-		PfGW456L13_4069	0.26	-1.1
4,567,715	-		PfGW456L13_4069	0.26	+0.2
4,567,715	-		PfGW456L13_4069	0.26	-2.5
4,567,715	-		PfGW456L13_4069	0.26	-1.7
4,567,715	-		PfGW456L13_4069	0.26	-2.1
4,567,825	+		PfGW456L13_4069	0.42	-0.7
4,567,987	+		PfGW456L13_4069	0.66	-0.2
4,567,988	-		PfGW456L13_4069	0.66	-1.8
4,568,218	+				-0.3
4,568,219	-				-1.6
4,568,267	-				-1.4